RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 TMEM120AQ9BXJ8 343 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 TMEM5Q9Y2B1 443 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 H0Y626 953 aa12.19□□□□□ -0.46
NPHP4-202ENST00000378161 SULT1B1O43704 296 aa12.19□□□□□ -0.46
NPHP4-202ENST00000378161 PLIN5Q00G26 463 aa12.19□□□□□ -0.46
NPHP4-202ENST00000378161 ERFEQ4G0M1 354 aa12.19□□□□□ -0.46
NPHP4-202ENST00000378161 IFT43Q96FT9 208 aa12.19□□□□□ -0.46
NPHP4-202ENST00000378161 KLHL32Q96NJ5 620 aa12.19□□□□□ -0.46
NPHP4-202ENST00000378161 MANSC1Q9H8J5 431 aa12.19□□□□□ -0.46
NPHP4-202ENST00000378161 COPG2Q9UBF2 871 aa12.19□□□□□ -0.46
NPHP4-202ENST00000378161 KLHL3Q9UH77 587 aa12.19□□□□□ -0.46
NPHP4-202ENST00000378161 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.19□□□□□ -0.46
NPHP4-202ENST00000378161 PP2D1A8MPX8 630 aa12.19□□□□□ -0.46
NPHP4-202ENST00000378161 CFBP00751 764 aa12.19□□□□□ -0.46
NPHP4-202ENST00000378161 BMP6P22004 513 aa12.19□□□□□ -0.46
NPHP4-202ENST00000378161 FECHP22830 423 aa12.19□□□□□ -0.46
NPHP4-202ENST00000378161 PPP2R2BQ00005 443 aa12.19□□□□□ -0.46
NPHP4-202ENST00000378161 S100ZQ8WXG8 99 aa12.19□□□□□ -0.46
NPHP4-202ENST00000378161 ARL8BQ9NVJ2 186 aa12.19□□□□□ -0.46
NPHP4-202ENST00000378161 MAFFQ9ULX9 164 aa12.19□□□□□ -0.46
NPHP4-202ENST00000378161 ANKRD26Q9UPS8 1709 aa12.19□□□□□ -0.46
NPHP4-202ENST00000378161 RHOBTB3O94955 611 aa12.19□□□□□ -0.46
NPHP4-202ENST00000378161 KITP10721 976 aa12.19□□□□□ -0.46
NPHP4-202ENST00000378161 CYP19A1P11511 503 aaPredicted RBP12.19□□□□□ -0.46
NPHP4-202ENST00000378161 KCNQ4P56696 695 aa12.19□□□□□ -0.46
NPHP4-202ENST00000378161 RAB14P61106 215 aa12.19□□□□□ -0.46
NPHP4-202ENST00000378161 GTF2IP78347 998 aa12.19□□□□□ -0.46
NPHP4-202ENST00000378161 ZNF211Q13398 564 aaPredicted RBP12.19□□□□□ -0.46
NPHP4-202ENST00000378161 ART3Q13508 389 aa12.19□□□□□ -0.46
NPHP4-202ENST00000378161 MOGQ16653 247 aa12.19□□□□□ -0.46
NPHP4-202ENST00000378161 FAM83BQ5T0W9 1011 aa12.19□□□□□ -0.46
NPHP4-202ENST00000378161 ULK2Q8IYT8 1036 aa12.19□□□□□ -0.46
NPHP4-202ENST00000378161 COA7Q96BR5 231 aa12.19□□□□□ -0.46
NPHP4-202ENST00000378161 PRICKLE1Q96MT3 831 aaPredicted RBP12.19□□□□□ -0.46
NPHP4-202ENST00000378161 TRIM9Q9C026 710 aa12.19□□□□□ -0.46
NPHP4-202ENST00000378161 BARHL2Q9NY43 387 aa12.19□□□□□ -0.46
NPHP4-202ENST00000378161 KIAA1257Q9ULG3 409 aa12.19□□□□□ -0.46
NPHP4-202ENST00000378161 RAB26Q9ULW5 256 aa12.19□□□□□ -0.46
NPHP4-202ENST00000378161 AQP9O43315 295 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 MAGEC1O60732 1142 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 PLA2G4BP0C869 781 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 MYL2P10916 166 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 AMPD1P23109 780 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 PSMC2P35998 433 aaKnown RBP12.18□□□□□ -0.46
NPHP4-202ENST00000378161 DLG1Q12959 904 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 SLC18A3Q16572 532 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 CDKL2Q92772 493 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 TUBGCP3Q96CW5 907 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 CCDC17Q96LX7 622 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 FRMD8Q9BZ67 464 aaPredicted RBP12.18□□□□□ -0.46
NPHP4-202ENST00000378161 UPF3AQ9H1J1 476 aaKnown RBP12.18□□□□□ -0.46
NPHP4-202ENST00000378161 C20orf96Q9NUD7 363 aaPredicted RBP12.18□□□□□ -0.46
NPHP4-202ENST00000378161 SNTG2Q9NY99 539 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 XDHP47989 1333 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 CES2O00748 559 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 NMT2O60551 498 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 CYP2D6P10635 497 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 GAP43P17677 238 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 COPAP53621 1224 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 MAPK7Q13164 816 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 GRM4Q14833 912 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 NFE2Q16621 373 aaPredicted RBP12.18□□□□□ -0.46
NPHP4-202ENST00000378161 SH3BP5LQ7L8J4 393 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 ELMOD1Q8N336 334 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 ATP13A3Q9H7F0 1226 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 GINM1Q9NU53 330 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 PKD2L1Q9P0L9 805 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 UBA2Q9UBT2 640 aaPredicted RBP12.18□□□□□ -0.46
NPHP4-202ENST00000378161 CLDN25C9JDP6 229 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 TAC1P20366 129 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 CCT3P49368 545 aaKnown RBP12.18□□□□□ -0.46
NPHP4-202ENST00000378161 CDK16Q00536 496 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 CYP4A11Q02928 519 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 IRF5Q13568 498 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 PGS1Q32NB8 556 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 IGSF11Q5DX21 431 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 XKR5Q6UX68 686 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 PRUNE1Q86TP1 453 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 FBXO11Q86XK2 927 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 TMEM47Q9BQJ4 181 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 CDH19Q9H159 772 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 TUT1Q9H6E5 874 aaKnown RBP12.18□□□□□ -0.46
NPHP4-202ENST00000378161 KCNMB3Q9NPA1 279 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 TOR4AQ9NXH8 423 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 HSFX1Q9UBD0 423 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 PDPK1O15530 556 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 ZW10O43264 779 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 KLHL2O95198 593 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 CYP1A1P04798 512 aaPredicted RBP12.18□□□□□ -0.46
NPHP4-202ENST00000378161 TRIM49P0CI25 452 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 TRIM49CP0CI26 452 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 ITGALP20701 1170 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 PEX2P28328 305 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 RAD23AP54725 363 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 TGFBIQ15582 683 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 TSC22D1Q15714 1073 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 NTRK3Q16288 839 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 CLVS2Q5SYC1 327 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 ATAD3BQ5T9A4 648 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 ANKRD40Q6AI12 368 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms