RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 ATP5OP48047 213 aa20.1■□□□□ 0.81
PCDHA4-201ENST00000378125 SLC6A3Q01959 620 aa20.1■□□□□ 0.81
PCDHA4-201ENST00000378125 ACAP1Q15027 740 aa20.1■□□□□ 0.81
PCDHA4-201ENST00000378125 SNX17Q15036 470 aa20.1■□□□□ 0.81
PCDHA4-201ENST00000378125 PKDCCQ504Y2 493 aa20.1■□□□□ 0.81
PCDHA4-201ENST00000378125 SLC35F5Q8WV83 523 aa20.1■□□□□ 0.81
PCDHA4-201ENST00000378125 P3H4Q92791 437 aa20.1■□□□□ 0.81
PCDHA4-201ENST00000378125 FOXP3Q9BZS1 431 aa20.1■□□□□ 0.81
PCDHA4-201ENST00000378125 LGALS13Q9UHV8 139 aa20.1■□□□□ 0.81
PCDHA4-201ENST00000378125 UNCXA6NJT0 531 aa20.1■□□□□ 0.81
PCDHA4-201ENST00000378125 IGF2BP3O00425 579 aaKnown RBP eCLIP20.1■□□□□ 0.81
PCDHA4-201ENST00000378125 ZNF865P0CJ78 1059 aaPredicted RBP20.1■□□□□ 0.81
PCDHA4-201ENST00000378125 SDC4P31431 198 aa20.1■□□□□ 0.81
PCDHA4-201ENST00000378125 PSEN2P49810 448 aa20.1■□□□□ 0.81
PCDHA4-201ENST00000378125 GPX6P59796 221 aa20.1■□□□□ 0.81
PCDHA4-201ENST00000378125 SOX4Q06945 474 aaPredicted RBP20.1■□□□□ 0.81
PCDHA4-201ENST00000378125 MAP2K5Q13163 448 aa20.1■□□□□ 0.81
PCDHA4-201ENST00000378125 ZKSCAN8Q15776 578 aaPredicted RBP20.1■□□□□ 0.81
PCDHA4-201ENST00000378125 PKN2Q16513 984 aaKnown RBP20.1■□□□□ 0.81
PCDHA4-201ENST00000378125 BBS9Q3SYG4 887 aa20.1■□□□□ 0.81
PCDHA4-201ENST00000378125 ALKAL1Q6UXT8 129 aa20.1■□□□□ 0.81
PCDHA4-201ENST00000378125 NAT8LQ8N9F0 302 aa20.1■□□□□ 0.81
PCDHA4-201ENST00000378125 FGFR1OP2Q9NVK5 253 aa20.1■□□□□ 0.81
PCDHA4-201ENST00000378125 CACNG4Q9UBN1 327 aa20.1■□□□□ 0.81
PCDHA4-201ENST00000378125 XPO7Q9UIA9 1087 aaKnown RBP20.1■□□□□ 0.81
PCDHA4-201ENST00000378125 ROR1Q01973 937 aa20.09■□□□□ 0.81
PCDHA4-201ENST00000378125 FBXO47Q5MNV8 452 aa20.09■□□□□ 0.81
PCDHA4-201ENST00000378125 FBXW10Q5XX13 1052 aa20.09■□□□□ 0.81
PCDHA4-201ENST00000378125 APBB1IPQ7Z5R6 666 aaPredicted RBP20.09■□□□□ 0.81
PCDHA4-201ENST00000378125 C4orf33Q8N1A6 199 aa20.09■□□□□ 0.81
PCDHA4-201ENST00000378125 TTC39CQ8N584 583 aa20.09■□□□□ 0.81
PCDHA4-201ENST00000378125 CCDC197Q8NCU1 140 aa20.09■□□□□ 0.81
PCDHA4-201ENST00000378125 PYROXD1Q8WU10 500 aa20.09■□□□□ 0.81
PCDHA4-201ENST00000378125 MAML1Q92585 1016 aa20.09■□□□□ 0.81
PCDHA4-201ENST00000378125 EURLQ9NYK6 297 aa20.09■□□□□ 0.81
PCDHA4-201ENST00000378125 CNTN3Q9P232 1028 aa20.09■□□□□ 0.81
PCDHA4-201ENST00000378125 GGT7Q9UJ14 662 aa20.09■□□□□ 0.81
PCDHA4-201ENST00000378125 BRCA2P51587 3418 aa20.09■□□□□ 0.81
PCDHA4-201ENST00000378125 MBLAC1A4D2B0 266 aaPredicted RBP20.09■□□□□ 0.81
PCDHA4-201ENST00000378125 ABHD2P08910 425 aa20.09■□□□□ 0.81
PCDHA4-201ENST00000378125 KRT15P19012 456 aa20.09■□□□□ 0.81
PCDHA4-201ENST00000378125 IL4RP24394 825 aa20.09■□□□□ 0.81
PCDHA4-201ENST00000378125 IGFBP6P24592 240 aaPredicted RBP20.09■□□□□ 0.81
PCDHA4-201ENST00000378125 MORN1Q5T089 497 aa20.09■□□□□ 0.81
PCDHA4-201ENST00000378125 ARRDC4Q8NCT1 418 aa20.09■□□□□ 0.81
PCDHA4-201ENST00000378125 FBXO36Q8NEA4 188 aa20.09■□□□□ 0.81
PCDHA4-201ENST00000378125 KBTBD7Q8WVZ9 684 aa20.09■□□□□ 0.81
PCDHA4-201ENST00000378125 NDRG1Q92597 394 aaKnown RBP20.09■□□□□ 0.81
PCDHA4-201ENST00000378125 TTC25Q96NG3 672 aa20.09■□□□□ 0.81
PCDHA4-201ENST00000378125 WDR83Q9BRX9 315 aaKnown RBP20.09■□□□□ 0.81
PCDHA4-201ENST00000378125 SLC4A5Q9BY07 1137 aa20.09■□□□□ 0.81
PCDHA4-201ENST00000378125 DERAQ9Y315 318 aa20.09■□□□□ 0.81
PCDHA4-201ENST00000378125 CLUHO75153 1309 aa20.08■□□□□ 0.81
PCDHA4-201ENST00000378125 KPNA7A9QM74 516 aa20.08■□□□□ 0.81
PCDHA4-201ENST00000378125 STX2P32856 288 aa20.08■□□□□ 0.81
PCDHA4-201ENST00000378125 GNL1P36915 607 aaPredicted RBP20.08■□□□□ 0.81
PCDHA4-201ENST00000378125 HUNKP57058 714 aa20.08■□□□□ 0.81
PCDHA4-201ENST00000378125 CST9Q5W186 159 aa20.08■□□□□ 0.81
PCDHA4-201ENST00000378125 NUGGCQ68CJ6 796 aa20.08■□□□□ 0.81
PCDHA4-201ENST00000378125 CEP128Q6ZU80 1094 aa20.08■□□□□ 0.81
PCDHA4-201ENST00000378125 YTHDF3Q7Z739 585 aaKnown RBP20.08■□□□□ 0.81
PCDHA4-201ENST00000378125 PCGF5Q86SE9 256 aa20.08■□□□□ 0.81
PCDHA4-201ENST00000378125 RNF157Q96PX1 679 aa20.08■□□□□ 0.81
PCDHA4-201ENST00000378125 SNRNP25Q9BV90 132 aaKnown RBP20.08■□□□□ 0.81
PCDHA4-201ENST00000378125 SAMD15Q9P1V8 674 aa20.08■□□□□ 0.81
PCDHA4-201ENST00000378125 UBQLN1Q9UMX0 589 aaKnown RBP20.08■□□□□ 0.81
PCDHA4-201ENST00000378125 ATXN2Q99700 1313 aaKnown RBP20.08■□□□□ 0.8
PCDHA4-201ENST00000378125 H0YHG0 523 aa20.08■□□□□ 0.8
PCDHA4-201ENST00000378125 ARL4CP56559 192 aa20.08■□□□□ 0.8
PCDHA4-201ENST00000378125 FKBP1BP68106 108 aa20.08■□□□□ 0.8
PCDHA4-201ENST00000378125 STILQ15468 1287 aa20.08■□□□□ 0.8
PCDHA4-201ENST00000378125 FAXCQ5TGI0 409 aa20.08■□□□□ 0.8
PCDHA4-201ENST00000378125 TMEM110Q86TL2 294 aa20.08■□□□□ 0.8
PCDHA4-201ENST00000378125 LRRC52Q8N7C0 313 aa20.08■□□□□ 0.8
PCDHA4-201ENST00000378125 CCDC134Q9H6E4 229 aa20.08■□□□□ 0.8
PCDHA4-201ENST00000378125 GGA2Q9UJY4 613 aa20.08■□□□□ 0.8
PCDHA4-201ENST00000378125 DNM1LO00429 736 aa20.07■□□□□ 0.8
PCDHA4-201ENST00000378125 ENDOD1O94919 500 aa20.07■□□□□ 0.8
PCDHA4-201ENST00000378125 NOMO1Q15155 1222 aa20.07■□□□□ 0.8
PCDHA4-201ENST00000378125 TAF1CQ15572 869 aaPredicted RBP20.07■□□□□ 0.8
PCDHA4-201ENST00000378125 UBXN11Q5T124 520 aa20.07■□□□□ 0.8
PCDHA4-201ENST00000378125 C3orf62Q6ZUJ4 267 aa20.07■□□□□ 0.8
PCDHA4-201ENST00000378125 PIGWQ7Z7B1 504 aa20.07■□□□□ 0.8
PCDHA4-201ENST00000378125 SLC2A14Q8TDB8 520 aa20.07■□□□□ 0.8
PCDHA4-201ENST00000378125 PCDH18Q9HCL0 1135 aa20.07■□□□□ 0.8
PCDHA4-201ENST00000378125 UBN1Q9NPG3 1134 aa20.07■□□□□ 0.8
PCDHA4-201ENST00000378125 NKIRAS1Q9NYS0 192 aa20.07■□□□□ 0.8
PCDHA4-201ENST00000378125 A0A1W2PPM1 405 aa20.07■□□□□ 0.8
PCDHA4-201ENST00000378125 PIRO00625 290 aa20.07■□□□□ 0.8
PCDHA4-201ENST00000378125 KCNN4O15554 427 aa20.07■□□□□ 0.8
PCDHA4-201ENST00000378125 AVILO75366 819 aa20.07■□□□□ 0.8
PCDHA4-201ENST00000378125 HDAC4P56524 1084 aa20.07■□□□□ 0.8
PCDHA4-201ENST00000378125 TTC31Q49AM3 519 aaPredicted RBP20.07■□□□□ 0.8
PCDHA4-201ENST00000378125 ANKRD20A8PQ5CZ79 823 aa20.07■□□□□ 0.8
PCDHA4-201ENST00000378125 PQLC3Q8N755 202 aa20.07■□□□□ 0.8
PCDHA4-201ENST00000378125 PLD5Q8N7P1 536 aa20.07■□□□□ 0.8
PCDHA4-201ENST00000378125 FRMD8P1Q9BZ68 369 aaPredicted RBP20.07■□□□□ 0.8
PCDHA4-201ENST00000378125 SNX25Q9H3E2 840 aa20.07■□□□□ 0.8
PCDHA4-201ENST00000378125 CHMP2BQ9UQN3 213 aa20.07■□□□□ 0.8
PCDHA4-201ENST00000378125 IBSPP21815 317 aaPredicted RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms