RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 CXorf51AA0A1B0GTR3 108 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 CREMQ03060 361 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 IRAK1BP1Q5VVH5 260 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 KCTD13Q8WZ19 329 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 OLA1Q9NTK5 396 aaKnown RBP5.12□□□□□ -1.59
PCDH9-201ENST00000377861 GDAQ9Y2T3 454 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 ASTN2O75129 1339 aaPredicted RBP5.12□□□□□ -1.59
PCDH9-201ENST00000377861 RTN3O95197 1032 aaPredicted RBP5.11□□□□□ -1.59
PCDH9-201ENST00000377861 PTGER2P43116 358 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 EGFL6Q8IUX8 553 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 PPWD1Q96BP3 646 aaKnown RBP5.11□□□□□ -1.59
PCDH9-201ENST00000377861 TLCD1Q96CP7 247 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 METTL5Q9NRN9 209 aaKnown RBP5.11□□□□□ -1.59
PCDH9-201ENST00000377861 FOXN3O00409 490 aaPredicted RBP5.11□□□□□ -1.59
PCDH9-201ENST00000377861 FGF10O15520 208 aaPredicted RBP5.11□□□□□ -1.59
PCDH9-201ENST00000377861 B4GALT4O60513 344 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 STAT5BP51692 787 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 GNA13Q14344 377 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 CHRNA2Q15822 529 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 URGCPQ8TCY9 931 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 ACTRT2Q8TDY3 377 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 Q96MT0 163 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 TUBGCP5Q96RT8 1024 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 BLMHQ13867 455 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 C4orf50Q6ZRC1 276 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 MOV10Q9HCE1 1003 aaKnown RBP5.11□□□□□ -1.59
PCDH9-201ENST00000377861 TLL2Q9Y6L7 1015 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 IDO1P14902 403 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 PSMA2P25787 234 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 HEXIM2Q96MH2 286 aaKnown RBP5.11□□□□□ -1.59
PCDH9-201ENST00000377861 ING2Q9H160 280 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 TRIM13O60858 407 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 HERC3Q15034 1050 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 PDPK2PQ6A1A2 396 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 BBS7Q8IWZ6 715 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 CACNA2D2Q9NY47 1150 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 CLEC16AQ2KHT3 1053 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 FBXO25Q8TCJ0 367 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 FARP1Q9Y4F1 1045 aaPredicted RBP5.11□□□□□ -1.59
PCDH9-201ENST00000377861 CNOT3O75175 753 aaKnown RBP5.11□□□□□ -1.59
PCDH9-201ENST00000377861 BAG2O95816 211 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 PDAP1Q13442 181 aaKnown RBP5.11□□□□□ -1.59
PCDH9-201ENST00000377861 BORAQ6PGQ7 559 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 LDHDQ86WU2 507 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 ERI1Q8IV48 349 aaKnown RBP5.11□□□□□ -1.59
PCDH9-201ENST00000377861 REEP2Q9BRK0 252 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 SAYSD1Q9NPB0 183 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 TBKBP1A7MCY6 615 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 BMP10O95393 424 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 PSMC3P17980 439 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 KCTD16Q68DU8 428 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 KLHDC4Q8TBB5 520 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 DNAJC19Q96DA6 116 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 SEC31BQ9NQW1 1179 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 NR3C2P08235 984 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 CRY2Q49AN0 593 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 TCHHL1Q5QJ38 904 aaPredicted RBP5.11□□□□□ -1.59
PCDH9-201ENST00000377861 TFB1MQ8WVM0 346 aaKnown RBP5.11□□□□□ -1.59
PCDH9-201ENST00000377861 SLC39A8Q9C0K1 460 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 AP5M1Q9H0R1 490 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 EHD1Q9H4M9 534 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 APRTP07741 180 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 GP5P40197 560 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 TMEM270Q6UE05 265 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 GLB1L3Q8NCI6 653 aaPredicted RBP5.11□□□□□ -1.59
PCDH9-201ENST00000377861 NTSR2O95665 410 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 GEMP55040 296 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 RAD51Q06609 339 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 CCDC80Q76M96 950 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 TMEM216Q9P0N5 145 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 MMP8P22894 467 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 GRAMD4Q6IC98 578 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 SLC2A11Q9BYW1 496 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 ISPDA4D126 451 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 EPN2O95208 641 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 RRM1P23921 792 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 KLRC1P26715 233 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 RABGAP1LQ5R372 815 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 LRP10Q7Z4F1 713 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 MCOLN2Q8IZK6 566 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 EME1Q96AY2 570 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 RTKNQ9BST9 563 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 TAS2R1Q9NYW7 299 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 KLHL42Q9P2K6 505 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 A0A0G2JND7 137 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 BCLAF3A2AJT9 711 aaKnown RBP5.11□□□□□ -1.59
PCDH9-201ENST00000377861 PRDM1O75626 825 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 RBP3P10745 1247 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 MPP3Q13368 585 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 E9PMD0 336 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 E2F6O75461 281 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 CYP3A5P20815 502 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 C1orf228Q6PIY5 440 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 LPCAT2Q7L5N7 544 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 SDR42E1Q8WUS8 393 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 C7orf43Q8WVR3 580 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 PTPN22Q9Y2R2 807 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 SF3B1O75533 1304 aaKnown RBP eCLIP5.11□□□□□ -1.59
PCDH9-201ENST00000377861 DLATP10515 647 aaKnown RBP5.11□□□□□ -1.59
PCDH9-201ENST00000377861 ATN1P54259 1190 aaPredicted RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms