RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 ENTPD1P49961 510 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 CDKL1Q00532 357 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 MAMLD1Q13495 774 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 C6orf52Q5T4I8 152 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 PRR5LQ6MZQ0 368 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 PASD1Q8IV76 773 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 AHI1Q8N157 1196 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 SLC44A1Q8WWI5 657 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 RSPH1Q8WYR4 309 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 ZNF778Q96MU6 729 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 CSRNP1Q96S65 589 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 WDR18Q9BV38 432 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 PLK2Q9NYY3 685 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 HEY1Q9Y5J3 304 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 MYH11P35749 1972 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 IQANK1A0A1B0GTG1 560 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 TCRBV9S1A1TA0A576 114 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 ARHGAP10A1A4S6 786 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 E7ESA3 106 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 COPEO14579 308 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 HOXD12P35452 270 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 PSMD7P51665 324 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 MTTPP55157 894 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 NAA20P61599 178 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 PFKPQ01813 784 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 PICALMQ13492 652 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 MYBPC2Q14324 1141 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 TBCCQ15814 346 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 GPATCH4Q5T3I0 446 aaKnown RBP16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 ZFYVE27Q5T4F4 411 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 ZNF772Q68DY9 489 aaPredicted RBP16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 BORAQ6PGQ7 559 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 ELMSAN1Q6PJG2 1045 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 XXYLT1Q8NBI6 393 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 ACTRT2Q8TDY3 377 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 JADE3Q92613 823 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 XPNPEP1Q9NQW7 623 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 SIRPGQ9P1W8 387 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 DRG1Q9Y295 367 aaKnown RBP16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 SSX2IPQ9Y2D8 614 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 AK5Q9Y6K8 562 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 IGLV3-22A0A075B6J6 115 aa16.29■□□□□ 0.2
CSNK1A1-202ENST00000377843 SERPINB7O75635 380 aa16.29■□□□□ 0.2
CSNK1A1-202ENST00000377843 ZMPSTE24O75844 475 aa16.29■□□□□ 0.2
CSNK1A1-202ENST00000377843 TNFAIP8O95379 198 aa16.29■□□□□ 0.2
CSNK1A1-202ENST00000377843 KRT1P04264 644 aa16.29■□□□□ 0.2
CSNK1A1-202ENST00000377843 ALDH2P05091 517 aa16.29■□□□□ 0.2
CSNK1A1-202ENST00000377843 NRLP54845 237 aa16.29■□□□□ 0.2
CSNK1A1-202ENST00000377843 PDK1Q15118 436 aa16.29■□□□□ 0.2
CSNK1A1-202ENST00000377843 USP41Q3LFD5 358 aa16.29■□□□□ 0.2
CSNK1A1-202ENST00000377843 USH1GQ495M9 461 aa16.29■□□□□ 0.2
CSNK1A1-202ENST00000377843 SLC10A5Q5PT55 438 aa16.29■□□□□ 0.2
CSNK1A1-202ENST00000377843 ANO5Q75V66 913 aa16.29■□□□□ 0.2
CSNK1A1-202ENST00000377843 PATL1Q86TB9 770 aaKnown RBP16.29■□□□□ 0.2
CSNK1A1-202ENST00000377843 ZFPM1Q8IX07 1006 aa16.29■□□□□ 0.2
CSNK1A1-202ENST00000377843 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.29■□□□□ 0.2
CSNK1A1-202ENST00000377843 PPP4R1Q8TF05 950 aa16.29■□□□□ 0.2
CSNK1A1-202ENST00000377843 FAM81BQ96LP2 452 aa16.29■□□□□ 0.2
CSNK1A1-202ENST00000377843 PLLPQ9Y342 182 aa16.29■□□□□ 0.2
CSNK1A1-202ENST00000377843 IVNS1ABPQ9Y6Y0 642 aa16.29■□□□□ 0.2
CSNK1A1-202ENST00000377843 SH3PXD2BA1X283 911 aa16.29■□□□□ 0.2
CSNK1A1-202ENST00000377843 TRIM49D1C9J1S8 452 aa16.29■□□□□ 0.2
CSNK1A1-202ENST00000377843 SNNO75324 88 aaPredicted RBP16.29■□□□□ 0.2
CSNK1A1-202ENST00000377843 TOP3BO95985 862 aaKnown RBP16.29■□□□□ 0.2
CSNK1A1-202ENST00000377843 ITGAXP20702 1163 aa16.29■□□□□ 0.2
CSNK1A1-202ENST00000377843 CIITAP33076 1130 aa16.29■□□□□ 0.2
CSNK1A1-202ENST00000377843 CNGA3Q16281 694 aa16.29■□□□□ 0.2
CSNK1A1-202ENST00000377843 SHROOM1Q2M3G4 852 aaPredicted RBP16.29■□□□□ 0.2
CSNK1A1-202ENST00000377843 PPIL6Q8IXY8 311 aa16.29■□□□□ 0.2
CSNK1A1-202ENST00000377843 RTKN2Q8IZC4 609 aa16.29■□□□□ 0.2
CSNK1A1-202ENST00000377843 DEFB107AQ8IZN7 70 aa16.29■□□□□ 0.2
CSNK1A1-202ENST00000377843 ZNF512Q96ME7 567 aaPredicted RBP16.29■□□□□ 0.2
CSNK1A1-202ENST00000377843 SLC13A1Q9BZW2 595 aa16.29■□□□□ 0.2
CSNK1A1-202ENST00000377843 BRD8Q9H0E9 1235 aa16.29■□□□□ 0.2
CSNK1A1-202ENST00000377843 TUFT1Q9NNX1 390 aa16.29■□□□□ 0.2
CSNK1A1-202ENST00000377843 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.29■□□□□ 0.2
CSNK1A1-202ENST00000377843 FAF1Q9UNN5 650 aaPredicted RBP16.29■□□□□ 0.2
CSNK1A1-202ENST00000377843 EFR3BQ9Y2G0 817 aa16.29■□□□□ 0.2
CSNK1A1-202ENST00000377843 SERPINB2P05120 415 aa16.28■□□□□ 0.2
CSNK1A1-202ENST00000377843 IDO1P14902 403 aa16.28■□□□□ 0.2
CSNK1A1-202ENST00000377843 COPAP53621 1224 aa16.28■□□□□ 0.2
CSNK1A1-202ENST00000377843 SYCP2LQ5T4T6 812 aa16.28■□□□□ 0.2
CSNK1A1-202ENST00000377843 PQLC1Q8N2U9 271 aa16.28■□□□□ 0.2
CSNK1A1-202ENST00000377843 NKD2Q969F2 451 aaPredicted RBP16.28■□□□□ 0.2
CSNK1A1-202ENST00000377843 ABHD8Q96I13 439 aa16.28■□□□□ 0.2
CSNK1A1-202ENST00000377843 APOL6Q9BWW8 343 aa16.28■□□□□ 0.2
CSNK1A1-202ENST00000377843 ZNRF3Q9ULT6 936 aa16.28■□□□□ 0.2
CSNK1A1-202ENST00000377843 DOLKQ9UPQ8 538 aa16.28■□□□□ 0.2
CSNK1A1-202ENST00000377843 STK24Q9Y6E0 443 aa16.28■□□□□ 0.2
CSNK1A1-202ENST00000377843 TMEM247A6NEH6 219 aa16.28■□□□□ 0.2
CSNK1A1-202ENST00000377843 C6orf229H3BNL8 230 aa16.28■□□□□ 0.2
CSNK1A1-202ENST00000377843 ITM2AO43736 263 aa16.28■□□□□ 0.2
CSNK1A1-202ENST00000377843 LYPLA1O75608 230 aaPredicted RBP16.28■□□□□ 0.2
CSNK1A1-202ENST00000377843 TRPA1O75762 1119 aa16.28■□□□□ 0.2
CSNK1A1-202ENST00000377843 FBXO21O94952 628 aa16.28■□□□□ 0.2
CSNK1A1-202ENST00000377843 ITGAVP06756 1048 aa16.28■□□□□ 0.2
CSNK1A1-202ENST00000377843 THRAP10827 490 aa16.28■□□□□ 0.2
CSNK1A1-202ENST00000377843 ELK3P41970 407 aa16.28■□□□□ 0.2
CSNK1A1-202ENST00000377843 NSFP46459 744 aaKnown RBP16.28■□□□□ 0.2
CSNK1A1-202ENST00000377843 RPL7AP62424 266 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms