RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 MTM1Q13496 603 aa18.53■□□□□ 0.56
CLSTN1-202ENST00000377298 BTG3Q14201 252 aaPredicted RBP18.53■□□□□ 0.56
CLSTN1-202ENST00000377298 PRUNE1Q86TP1 453 aa18.53■□□□□ 0.56
CLSTN1-202ENST00000377298 ZBTB45Q96K62 511 aaPredicted RBP18.53■□□□□ 0.56
CLSTN1-202ENST00000377298 XPO6Q96QU8 1125 aaKnown RBP18.53■□□□□ 0.56
CLSTN1-202ENST00000377298 RNF208Q9H0X6 261 aa18.53■□□□□ 0.56
CLSTN1-202ENST00000377298 TTLL13PA6NNM8 815 aa18.53■□□□□ 0.56
CLSTN1-202ENST00000377298 KDM1AO60341 852 aa18.53■□□□□ 0.56
CLSTN1-202ENST00000377298 PABPC3Q9H361 631 aaKnown RBP18.53■□□□□ 0.56
CLSTN1-202ENST00000377298 PSD3Q9NYI0 1048 aa18.53■□□□□ 0.56
CLSTN1-202ENST00000377298 SLC25A13Q9UJS0 675 aa18.53■□□□□ 0.56
CLSTN1-202ENST00000377298 TMEM120BA0PK00 339 aa18.53■□□□□ 0.56
CLSTN1-202ENST00000377298 EFL1Q7Z2Z2 1120 aaKnown RBP18.53■□□□□ 0.56
CLSTN1-202ENST00000377298 ARL8AQ96BM9 186 aa18.53■□□□□ 0.56
CLSTN1-202ENST00000377298 ELOVL4Q9GZR5 314 aa18.53■□□□□ 0.56
CLSTN1-202ENST00000377298 ARHGAP10A1A4S6 786 aa18.52■□□□□ 0.56
CLSTN1-202ENST00000377298 AMHP03971 560 aa18.52■□□□□ 0.56
CLSTN1-202ENST00000377298 APOA4P06727 396 aa18.52■□□□□ 0.56
CLSTN1-202ENST00000377298 RHOCP08134 193 aa18.52■□□□□ 0.56
CLSTN1-202ENST00000377298 CUL3Q13618 768 aa18.52■□□□□ 0.56
CLSTN1-202ENST00000377298 FAM83EQ2M2I3 478 aa18.52■□□□□ 0.56
CLSTN1-202ENST00000377298 GPR142Q7Z601 462 aa18.52■□□□□ 0.56
CLSTN1-202ENST00000377298 TMEM86AQ8N2M4 240 aa18.52■□□□□ 0.56
CLSTN1-202ENST00000377298 PIP4K2CQ8TBX8 421 aa18.52■□□□□ 0.56
CLSTN1-202ENST00000377298 BLOC1S5Q8TDH9 187 aa18.52■□□□□ 0.56
CLSTN1-202ENST00000377298 LZICQ8WZA0 190 aa18.52■□□□□ 0.56
CLSTN1-202ENST00000377298 DMAP1Q9NPF5 467 aaPredicted RBP18.52■□□□□ 0.56
CLSTN1-202ENST00000377298 CHST12Q9NRB3 414 aa18.52■□□□□ 0.56
CLSTN1-202ENST00000377298 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.52■□□□□ 0.56
CLSTN1-202ENST00000377298 ANKRD63C9JTQ0 380 aa18.52■□□□□ 0.56
CLSTN1-202ENST00000377298 H0Y3Z8 333 aa18.52■□□□□ 0.56
CLSTN1-202ENST00000377298 AP2B1P63010 937 aa18.52■□□□□ 0.56
CLSTN1-202ENST00000377298 PLD1Q13393 1074 aa18.52■□□□□ 0.56
CLSTN1-202ENST00000377298 FAM171A1Q5VUB5 890 aa18.52■□□□□ 0.56
CLSTN1-202ENST00000377298 DDI1Q8WTU0 396 aa18.52■□□□□ 0.56
CLSTN1-202ENST00000377298 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.52■□□□□ 0.56
CLSTN1-202ENST00000377298 SPATA31C2B4DYI2 1134 aa18.52■□□□□ 0.56
CLSTN1-202ENST00000377298 YWHAZP63104 245 aaKnown RBP18.52■□□□□ 0.56
CLSTN1-202ENST00000377298 GTF2BQ00403 316 aa18.52■□□□□ 0.56
CLSTN1-202ENST00000377298 SPDYAQ5MJ70 313 aa18.52■□□□□ 0.56
CLSTN1-202ENST00000377298 ADCK2Q7Z695 626 aa18.52■□□□□ 0.56
CLSTN1-202ENST00000377298 CARNMT1Q8N4J0 409 aa18.52■□□□□ 0.56
CLSTN1-202ENST00000377298 LRRC40Q9H9A6 602 aa18.52■□□□□ 0.56
CLSTN1-202ENST00000377298 TNFSF13BQ9Y275 285 aa18.52■□□□□ 0.56
CLSTN1-202ENST00000377298 ITM2BQ9Y287 266 aa18.52■□□□□ 0.56
CLSTN1-202ENST00000377298 TRIM66O15016 1216 aa18.52■□□□□ 0.55
CLSTN1-202ENST00000377298 HDAC4P56524 1084 aa18.52■□□□□ 0.55
CLSTN1-202ENST00000377298 NOGQ13253 232 aa18.52■□□□□ 0.55
CLSTN1-202ENST00000377298 DACT3Q96B18 629 aaPredicted RBP18.52■□□□□ 0.55
CLSTN1-202ENST00000377298 HEATR9A2RTY3 570 aa18.51■□□□□ 0.55
CLSTN1-202ENST00000377298 AP5Z1O43299 807 aa18.51■□□□□ 0.55
CLSTN1-202ENST00000377298 MAFO75444 373 aaPredicted RBP18.51■□□□□ 0.55
CLSTN1-202ENST00000377298 SP3Q02447 781 aa18.51■□□□□ 0.55
CLSTN1-202ENST00000377298 ERMARDQ5T6L9 678 aa18.51■□□□□ 0.55
CLSTN1-202ENST00000377298 MROH9Q5TGP6 573 aa18.51■□□□□ 0.55
CLSTN1-202ENST00000377298 LRP10Q7Z4F1 713 aa18.51■□□□□ 0.55
CLSTN1-202ENST00000377298 EMILIN2Q9BXX0 1053 aa18.51■□□□□ 0.55
CLSTN1-202ENST00000377298 RNF103-CHMP3A0A140T963 221 aa18.51■□□□□ 0.55
CLSTN1-202ENST00000377298 TRIM49D1C9J1S8 452 aa18.51■□□□□ 0.55
CLSTN1-202ENST00000377298 DNAJC8O75937 253 aaPredicted RBP18.51■□□□□ 0.55
CLSTN1-202ENST00000377298 RECQL4O94761 1208 aa18.51■□□□□ 0.55
CLSTN1-202ENST00000377298 GLRA2P23416 452 aa18.51■□□□□ 0.55
CLSTN1-202ENST00000377298 ACAT1P24752 427 aaKnown RBP18.51■□□□□ 0.55
CLSTN1-202ENST00000377298 CASKIN2Q8WXE0 1202 aa18.51■□□□□ 0.55
CLSTN1-202ENST00000377298 COPS5Q92905 334 aa18.51■□□□□ 0.55
CLSTN1-202ENST00000377298 APBA2Q99767 749 aa18.51■□□□□ 0.55
CLSTN1-202ENST00000377298 VPS28Q9UK41 221 aa18.51■□□□□ 0.55
CLSTN1-202ENST00000377298 ZBTB22O15209 634 aa18.51■□□□□ 0.55
CLSTN1-202ENST00000377298 HMGCRP04035 888 aa18.51■□□□□ 0.55
CLSTN1-202ENST00000377298 EIF4BP23588 611 aaKnown RBP18.51■□□□□ 0.55
CLSTN1-202ENST00000377298 ALDH18A1P54886 795 aaKnown RBP18.51■□□□□ 0.55
CLSTN1-202ENST00000377298 TMCO4Q5TGY1 634 aa18.51■□□□□ 0.55
CLSTN1-202ENST00000377298 HS6ST3Q8IZP7 471 aa18.51■□□□□ 0.55
CLSTN1-202ENST00000377298 ADAM2Q99965 735 aa18.51■□□□□ 0.55
CLSTN1-202ENST00000377298 PKD2L2Q9NZM6 624 aa18.51■□□□□ 0.55
CLSTN1-202ENST00000377298 USP15Q9Y4E8 981 aaPredicted RBP18.51■□□□□ 0.55
CLSTN1-202ENST00000377298 CDY2AQ9Y6F7 541 aa18.51■□□□□ 0.55
CLSTN1-202ENST00000377298 CDY1Q9Y6F8 540 aa18.51■□□□□ 0.55
CLSTN1-202ENST00000377298 STMN1P16949 149 aa18.51■□□□□ 0.55
CLSTN1-202ENST00000377298 INPP1P49441 399 aa18.51■□□□□ 0.55
CLSTN1-202ENST00000377298 DEFB115Q30KQ5 88 aa18.51■□□□□ 0.55
CLSTN1-202ENST00000377298 KLF6Q99612 283 aaPredicted RBP18.51■□□□□ 0.55
CLSTN1-202ENST00000377298 MRPL46Q9H2W6 279 aaKnown RBP18.51■□□□□ 0.55
CLSTN1-202ENST00000377298 AVENQ9NQS1 362 aaPredicted RBP18.51■□□□□ 0.55
CLSTN1-202ENST00000377298 DRG1Q9Y295 367 aaKnown RBP18.51■□□□□ 0.55
CLSTN1-202ENST00000377298 MICAL2O94851 1124 aa18.5■□□□□ 0.55
CLSTN1-202ENST00000377298 MAP3K6O95382 1288 aa18.5■□□□□ 0.55
CLSTN1-202ENST00000377298 LRRC43Q8N309 656 aa18.5■□□□□ 0.55
CLSTN1-202ENST00000377298 HSD17B3P37058 310 aa18.5■□□□□ 0.55
CLSTN1-202ENST00000377298 ADIGQ0VDE8 80 aa18.5■□□□□ 0.55
CLSTN1-202ENST00000377298 RGS9BPQ6ZS82 235 aa18.5■□□□□ 0.55
CLSTN1-202ENST00000377298 IL17RAQ96F46 866 aa18.5■□□□□ 0.55
CLSTN1-202ENST00000377298 USP20Q9Y2K6 914 aa18.5■□□□□ 0.55
CLSTN1-202ENST00000377298 SOAT2O75908 522 aa18.5■□□□□ 0.55
CLSTN1-202ENST00000377298 DNAJB2P25686 324 aa18.5■□□□□ 0.55
CLSTN1-202ENST00000377298 LVRNQ6Q4G3 990 aa18.5■□□□□ 0.55
CLSTN1-202ENST00000377298 NPHS2Q9NP85 383 aa18.5■□□□□ 0.55
CLSTN1-202ENST00000377298 SCUBE2Q9NQ36 999 aa18.5■□□□□ 0.55
CLSTN1-202ENST00000377298 TRMT6Q9UJA5 497 aaKnown RBP18.5■□□□□ 0.55
CLSTN1-202ENST00000377298 MYO5BQ9ULV0 1848 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms