RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 APOPT1Q96IL0 206 aa15.17■□□□□ 0.02
MSH5-201ENST00000375703 PIK3R2O00459 728 aa15.17■□□□□ 0.02
MSH5-201ENST00000375703 CCDC22O60826 627 aa15.17■□□□□ 0.02
MSH5-201ENST00000375703 SPAG6O75602 509 aa15.17■□□□□ 0.02
MSH5-201ENST00000375703 HAUS5O94927 633 aa15.17■□□□□ 0.02
MSH5-201ENST00000375703 ARIH2O95376 493 aa15.17■□□□□ 0.02
MSH5-201ENST00000375703 PDGFRAP16234 1089 aa15.17■□□□□ 0.02
MSH5-201ENST00000375703 GPD1P21695 349 aa15.17■□□□□ 0.02
MSH5-201ENST00000375703 ETV4P43268 484 aa15.17■□□□□ 0.02
MSH5-201ENST00000375703 FAM47CQ5HY64 1035 aa15.17■□□□□ 0.02
MSH5-201ENST00000375703 SH2D5Q6ZV89 423 aa15.17■□□□□ 0.02
MSH5-201ENST00000375703 CHSY1Q86X52 802 aa15.17■□□□□ 0.02
MSH5-201ENST00000375703 TTC8Q8TAM2 541 aa15.17■□□□□ 0.02
MSH5-201ENST00000375703 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.17■□□□□ 0.02
MSH5-201ENST00000375703 FBXO41Q8TF61 875 aa15.17■□□□□ 0.02
MSH5-201ENST00000375703 RXFP2Q8WXD0 754 aa15.17■□□□□ 0.02
MSH5-201ENST00000375703 NAF1Q96HR8 494 aaKnown RBP15.17■□□□□ 0.02
MSH5-201ENST00000375703 ANKRD27Q96NW4 1050 aa15.17■□□□□ 0.02
MSH5-201ENST00000375703 CNPY3Q9BT09 278 aa15.17■□□□□ 0.02
MSH5-201ENST00000375703 MINDY3Q9H8M7 445 aa15.17■□□□□ 0.02
MSH5-201ENST00000375703 RAB6BQ9NRW1 208 aa15.17■□□□□ 0.02
MSH5-201ENST00000375703 TNFSF13BQ9Y275 285 aa15.17■□□□□ 0.02
MSH5-201ENST00000375703 MTO1Q9Y2Z2 717 aaKnown RBP15.17■□□□□ 0.02
MSH5-201ENST00000375703 SRCAPQ6ZRS2 3230 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 GPR25O00155 361 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 CHADO15335 359 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 ENTPD5O75356 428 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 TGDSO95455 350 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 HMGCRP04035 888 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 VDRP11473 427 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 BGNP21810 368 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 CDC25CP30307 473 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 PRKD1Q15139 912 aaPredicted RBP15.16■□□□□ 0.02
MSH5-201ENST00000375703 RAB6CQ53S08 254 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 JADE1Q6IE81 842 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 OR6B2Q6IFH4 312 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 EFCAB12Q6NXP0 572 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 PLPPR4Q7Z2D5 763 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 CFAP36Q96G28 342 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 FAXDC2Q96IV6 333 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 NSL1Q96IY1 281 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 RAB6CQ9H0N0 254 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 KCNK13Q9HB14 408 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 ARL8BQ9NVJ2 186 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 RPL26L1Q9UNX3 145 aaKnown RBP15.16■□□□□ 0.02
MSH5-201ENST00000375703 LRRC42Q9Y546 428 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 H0Y3Z8 333 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 PRPSAP2O60256 369 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 LGR5O75473 907 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 SERPINB3P29508 390 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 CDO1Q16878 200 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 C15orf59Q2T9L4 293 aaPredicted RBP15.16■□□□□ 0.02
MSH5-201ENST00000375703 NOL9Q5SY16 702 aaKnown RBP15.16■□□□□ 0.02
MSH5-201ENST00000375703 PRPF39Q86UA1 669 aaKnown RBP15.16■□□□□ 0.02
MSH5-201ENST00000375703 CTAGE3PQ8IX95 158 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 ZBTB10Q96DT7 871 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 RNF157Q96PX1 679 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 BTBD10Q9BSF8 475 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 TMEM120AQ9BXJ8 343 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 CADM1Q9BY67 442 aaKnown RBP15.16■□□□□ 0.02
MSH5-201ENST00000375703 SPATC1LQ9H0A9 340 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 USP29Q9HBJ7 922 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 PAK5Q9P286 719 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 KCNN4O15554 427 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 STAG3L1P0CL83 205 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 CLCN3P51790 818 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 MBTD1Q05BQ5 628 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 KRT81Q14533 505 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 CELF3Q5SZQ8 465 aaKnown RBP15.16■□□□□ 0.02
MSH5-201ENST00000375703 TTC39BQ5VTQ0 682 aaPredicted RBP15.16■□□□□ 0.02
MSH5-201ENST00000375703 SLC26A11Q86WA9 606 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 MAP7D3Q8IWC1 876 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 ENDOVQ8N8Q3 282 aaKnown RBP15.16■□□□□ 0.02
MSH5-201ENST00000375703 SH3TC2Q8TF17 1288 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 MIPEPQ99797 713 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 IQCGQ9H095 443 aaKnown RBP15.16■□□□□ 0.02
MSH5-201ENST00000375703 CYP3A43Q9HB55 503 aa15.16■□□□□ 0.02
MSH5-201ENST00000375703 C2CD4BA6NLJ0 364 aa15.15■□□□□ 0.02
MSH5-201ENST00000375703 COPEO14579 308 aa15.15■□□□□ 0.02
MSH5-201ENST00000375703 GRAP2O75791 330 aa15.15■□□□□ 0.02
MSH5-201ENST00000375703 FAM155BO75949 473 aa15.15■□□□□ 0.02
MSH5-201ENST00000375703 DLDP09622 509 aaKnown RBP15.15■□□□□ 0.02
MSH5-201ENST00000375703 IQCF3P0C7M6 154 aa15.15■□□□□ 0.02
MSH5-201ENST00000375703 P4HA1P13674 534 aa15.15■□□□□ 0.02
MSH5-201ENST00000375703 ATICP31939 592 aa15.15■□□□□ 0.02
MSH5-201ENST00000375703 CDK16Q00536 496 aa15.15■□□□□ 0.02
MSH5-201ENST00000375703 SCYL2Q6P3W7 929 aa15.15■□□□□ 0.02
MSH5-201ENST00000375703 CYP4V2Q6ZWL3 525 aaPredicted RBP15.15■□□□□ 0.02
MSH5-201ENST00000375703 PPM1NQ8N819 430 aa15.15■□□□□ 0.02
MSH5-201ENST00000375703 PTCD3Q96EY7 689 aaKnown RBP15.15■□□□□ 0.02
MSH5-201ENST00000375703 ASCC2Q9H1I8 757 aaPredicted RBP15.15■□□□□ 0.02
MSH5-201ENST00000375703 DCLRE1BQ9H816 532 aa15.15■□□□□ 0.02
MSH5-201ENST00000375703 PNPLA8Q9NP80 782 aa15.15■□□□□ 0.02
MSH5-201ENST00000375703 TRIM49D1C9J1S8 452 aa15.15■□□□□ 0.02
MSH5-201ENST00000375703 DNAJC6O75061 913 aa15.15■□□□□ 0.02
MSH5-201ENST00000375703 LMNAP02545 664 aaKnown RBP15.15■□□□□ 0.02
MSH5-201ENST00000375703 GCLCP48506 637 aaPredicted RBP15.15■□□□□ 0.02
MSH5-201ENST00000375703 SERPINB4P48594 390 aa15.15■□□□□ 0.02
MSH5-201ENST00000375703 MAP1SQ66K74 1059 aaPredicted RBP15.15■□□□□ 0.02
MSH5-201ENST00000375703 TRNP1Q6NT89 227 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms