RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 ANGPT2O15123 496 aa17.41■□□□□ 0.38
VARS-215ENST00000375663 EDF1O60869 148 aaKnown RBP17.41■□□□□ 0.38
VARS-215ENST00000375663 MPZL3Q6UWV2 235 aa17.41■□□□□ 0.38
VARS-215ENST00000375663 PPP2R3CQ969Q6 453 aa17.41■□□□□ 0.38
VARS-215ENST00000375663 TMEM109Q9BVC6 243 aa17.41■□□□□ 0.38
VARS-215ENST00000375663 KLHL4Q9C0H6 718 aa17.41■□□□□ 0.38
VARS-215ENST00000375663 DEFB129Q9H1M3 183 aa17.41■□□□□ 0.38
VARS-215ENST00000375663 DRG1Q9Y295 367 aaKnown RBP17.41■□□□□ 0.38
VARS-215ENST00000375663 TAS2R40P59535 323 aa17.4■□□□□ 0.38
VARS-215ENST00000375663 BNIP1Q12981 228 aa17.4■□□□□ 0.38
VARS-215ENST00000375663 ZCCHC23Q6ZST2 131 aa17.4■□□□□ 0.38
VARS-215ENST00000375663 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.4■□□□□ 0.38
VARS-215ENST00000375663 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.4■□□□□ 0.384e-6■□□□□ 11
VARS-215ENST00000375663 APPL2Q8NEU8 664 aa17.4■□□□□ 0.38
VARS-215ENST00000375663 JADE3Q92613 823 aa17.4■□□□□ 0.38
VARS-215ENST00000375663 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.4■□□□□ 0.383e-7■■■■■ 39.3
VARS-215ENST00000375663 CAAP1Q9H8G2 361 aa17.4■□□□□ 0.38
VARS-215ENST00000375663 R3HDM2Q9Y2K5 976 aaKnown RBP17.4■□□□□ 0.38
VARS-215ENST00000375663 ARHGEF37A1IGU5 675 aa17.4■□□□□ 0.38
VARS-215ENST00000375663 CPA3P15088 417 aa17.4■□□□□ 0.38
VARS-215ENST00000375663 ITGB5P18084 799 aa17.4■□□□□ 0.38
VARS-215ENST00000375663 ACOT1Q86TX2 421 aa17.4■□□□□ 0.38
VARS-215ENST00000375663 PPHLN1Q8NEY8 458 aaKnown RBP17.4■□□□□ 0.38
VARS-215ENST00000375663 FAM84AQ96KN4 292 aa17.4■□□□□ 0.38
VARS-215ENST00000375663 ZBTB18Q99592 522 aa17.4■□□□□ 0.38
VARS-215ENST00000375663 CCDC90BQ9GZT6 254 aa17.4■□□□□ 0.38
VARS-215ENST00000375663 IL1RAPL1Q9NZN1 696 aa17.4■□□□□ 0.38
VARS-215ENST00000375663 A8MUI8 341 aa17.4■□□□□ 0.38
VARS-215ENST00000375663 FOXO6A8MYZ6 492 aa17.4■□□□□ 0.38
VARS-215ENST00000375663 MAGEB2O15479 319 aa17.4■□□□□ 0.38
VARS-215ENST00000375663 GAS2O43903 313 aaKnown RBP17.4■□□□□ 0.38
VARS-215ENST00000375663 HBP1O60381 514 aa17.4■□□□□ 0.38
VARS-215ENST00000375663 CNTFP26441 200 aa17.4■□□□□ 0.38
VARS-215ENST00000375663 MIPP30301 263 aa17.4■□□□□ 0.38
VARS-215ENST00000375663 RPL7AP62424 266 aaKnown RBP17.4■□□□□ 0.38
VARS-215ENST00000375663 INPP5AQ14642 412 aa17.4■□□□□ 0.38
VARS-215ENST00000375663 LLGL2Q6P1M3 1020 aa17.4■□□□□ 0.38
VARS-215ENST00000375663 ALLCQ8N6M5 410 aa17.4■□□□□ 0.38
VARS-215ENST00000375663 GFM2Q969S9 779 aaKnown RBP17.4■□□□□ 0.38
VARS-215ENST00000375663 NCLNQ969V3 563 aa17.4■□□□□ 0.38
VARS-215ENST00000375663 THAP1Q9NVV9 213 aa17.4■□□□□ 0.38
VARS-215ENST00000375663 ZNF212Q9UDV6 495 aa17.4■□□□□ 0.38
VARS-215ENST00000375663 SNX5Q9Y5X3 404 aa17.4■□□□□ 0.38
VARS-215ENST00000375663 NRXN3Q9Y4C0 1643 aa17.4■□□□□ 0.38
VARS-215ENST00000375663 APOC4-APOC2K7ER74 178 aa17.4■□□□□ 0.38
VARS-215ENST00000375663 SUPT3HO75486 399 aa17.4■□□□□ 0.38
VARS-215ENST00000375663 APOC2P02655 101 aa17.4■□□□□ 0.38
VARS-215ENST00000375663 ACADSBP45954 432 aa17.4■□□□□ 0.38
VARS-215ENST00000375663 CLCN3P51790 818 aa17.4■□□□□ 0.38
VARS-215ENST00000375663 DPYSL3Q14195 570 aa17.4■□□□□ 0.38
VARS-215ENST00000375663 SEMA4DQ92854 862 aa17.4■□□□□ 0.38
VARS-215ENST00000375663 TMEM176AQ96HP8 235 aa17.4■□□□□ 0.38
VARS-215ENST00000375663 ELMO2Q96JJ3 720 aa17.4■□□□□ 0.38
VARS-215ENST00000375663 MYOZ2Q9NPC6 264 aa17.4■□□□□ 0.38
VARS-215ENST00000375663 RGPD8O14715 1765 aaPredicted RBP17.39■□□□□ 0.37
VARS-215ENST00000375663 SNX2O60749 519 aa17.39■□□□□ 0.37
VARS-215ENST00000375663 BANF1O75531 89 aa17.39■□□□□ 0.37
VARS-215ENST00000375663 ARPP19P56211 112 aa17.39■□□□□ 0.37
VARS-215ENST00000375663 N4BP2L1Q5TBK1 243 aaPredicted RBP17.39■□□□□ 0.37
VARS-215ENST00000375663 IYDQ6PHW0 289 aa17.39■□□□□ 0.37
VARS-215ENST00000375663 OTOAQ7RTW8 1153 aa17.39■□□□□ 0.37
VARS-215ENST00000375663 ZNF398Q8TD17 642 aa17.39■□□□□ 0.37
VARS-215ENST00000375663 APBB2Q92870 758 aa17.39■□□□□ 0.37
VARS-215ENST00000375663 NMD3Q96D46 503 aaKnown RBP17.39■□□□□ 0.37
VARS-215ENST00000375663 IFT43Q96FT9 208 aa17.39■□□□□ 0.37
VARS-215ENST00000375663 KIAA1257Q9ULG3 409 aa17.39■□□□□ 0.37
VARS-215ENST00000375663 ABCC6O95255 1503 aa17.39■□□□□ 0.37
VARS-215ENST00000375663 MGRN1O60291 552 aa17.39■□□□□ 0.37
VARS-215ENST00000375663 MGEA5O60502 916 aa17.39■□□□□ 0.37
VARS-215ENST00000375663 KRT36O76013 467 aa17.39■□□□□ 0.37
VARS-215ENST00000375663 GFAPP14136 432 aa17.39■□□□□ 0.37
VARS-215ENST00000375663 KCNA4P22459 653 aa17.39■□□□□ 0.37
VARS-215ENST00000375663 EIF4BP23588 611 aaKnown RBP17.39■□□□□ 0.37
VARS-215ENST00000375663 ITGA9Q13797 1035 aa17.39■□□□□ 0.37
VARS-215ENST00000375663 DACT2Q5SW24 774 aa17.39■□□□□ 0.37
VARS-215ENST00000375663 FAM237BA0A1B0GVD1 139 aa17.39■□□□□ 0.37
VARS-215ENST00000375663 A0A1W2PPM1 405 aa17.39■□□□□ 0.37
VARS-215ENST00000375663 MEI4A8MW99 385 aa17.39■□□□□ 0.37
VARS-215ENST00000375663 CLPTM1O96005 669 aa17.39■□□□□ 0.37
VARS-215ENST00000375663 ZNF268Q14587 947 aaPredicted RBP17.39■□□□□ 0.37
VARS-215ENST00000375663 PARP6Q2NL67 630 aa17.39■□□□□ 0.37
VARS-215ENST00000375663 LRRC38Q5VT99 294 aa17.39■□□□□ 0.37
VARS-215ENST00000375663 PDPK2PQ6A1A2 396 aa17.39■□□□□ 0.37
VARS-215ENST00000375663 ECHDC2Q86YB7 292 aa17.39■□□□□ 0.37
VARS-215ENST00000375663 PCYOX1LQ8NBM8 494 aa17.39■□□□□ 0.37
VARS-215ENST00000375663 SLC7A14Q8TBB6 771 aa17.39■□□□□ 0.37
VARS-215ENST00000375663 EFCAB1Q9HAE3 211 aa17.39■□□□□ 0.37
VARS-215ENST00000375663 ARHGEF38Q9NXL2 777 aa17.39■□□□□ 0.37
VARS-215ENST00000375663 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.39■□□□□ 0.37
VARS-215ENST00000375663 UBA6A0AVT1 1052 aaPredicted RBP17.38■□□□□ 0.37
VARS-215ENST00000375663 CREB1P16220 341 aa17.38■□□□□ 0.37
VARS-215ENST00000375663 RPL22P35268 128 aaKnown RBP17.38■□□□□ 0.37
VARS-215ENST00000375663 CDH8P55286 799 aa17.38■□□□□ 0.37
VARS-215ENST00000375663 TBL3Q12788 808 aaKnown RBP17.38■□□□□ 0.37
VARS-215ENST00000375663 SLC35G1Q2M3R5 365 aa17.38■□□□□ 0.37
VARS-215ENST00000375663 BNC2Q6ZN30 1099 aaPredicted RBP17.38■□□□□ 0.37
VARS-215ENST00000375663 CHST13Q8NET6 341 aa17.38■□□□□ 0.37
VARS-215ENST00000375663 RMDN2Q96LZ7 410 aa17.38■□□□□ 0.37
VARS-215ENST00000375663 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.38■□□□□ 0.37
VARS-215ENST00000375663 GRHL1Q9NZI5 618 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms