RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 TRAPPC12Q8WVT3 735 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 GPRASP2Q96D09 838 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 TEX13BQ9BXU2 312 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 LZTS1Q9Y250 596 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 STAG3L1P0CL83 205 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 FGFR3P22607 806 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 PRKCIP41743 596 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 PTDSS1P48651 473 aaKnown RBP6.78□□□□□ -1.32
SMC1A-202ENST00000375340 PAPOLAP51003 745 aaKnown RBP6.78□□□□□ -1.32
SMC1A-202ENST00000375340 RINLQ6ZS11 566 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 RASGEF1CQ8N431 466 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 TMC2Q8TDI7 906 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 STK32AQ8WU08 396 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 VPS50Q96JG6 964 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 COL14A1Q05707 1796 aaKnown RBP6.78□□□□□ -1.32
SMC1A-202ENST00000375340 ENTPD5O75356 428 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 KRT36O76013 467 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 TGM2P21980 687 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 RARRES1P49788 294 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 STYK1Q6J9G0 422 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 MSL3Q8N5Y2 521 aaKnown RBP6.78□□□□□ -1.32
SMC1A-202ENST00000375340 ZSCAN18Q8TBC5 510 aaPredicted RBP6.78□□□□□ -1.32
SMC1A-202ENST00000375340 ACTL9Q8TC94 416 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 WDR35Q9P2L0 1181 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.78□□□□□ -1.32
SMC1A-202ENST00000375340 A0A1W2PPM1 405 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 TBL3Q12788 808 aaKnown RBP6.78□□□□□ -1.32
SMC1A-202ENST00000375340 CAPRIN1Q14444 709 aaKnown RBP6.78□□□□□ -1.32
SMC1A-202ENST00000375340 DEFB107AQ8IZN7 70 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 ALLCQ8N6M5 410 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 NETO2Q8NC67 525 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 PPP1R13LQ8WUF5 828 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 PIK3R5Q8WYR1 880 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 MPP4Q96JB8 637 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 APPL1Q9UKG1 709 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 R3HDM2Q9Y2K5 976 aaKnown RBP6.78□□□□□ -1.32
SMC1A-202ENST00000375340 GOLGA8TH3BQL2 631 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 DNM1LO00429 736 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 ANGPT2O15123 496 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 TGFB1I1O43294 461 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 HMGCRP04035 888 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 HNRNPCP07910 306 aaKnown RBP eCLIP6.78□□□□□ -1.32
SMC1A-202ENST00000375340 TBCCQ15814 346 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 SPDYCQ5MJ68 293 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 DENND1BQ6P3S1 775 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 TTC27Q6P3X3 843 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 WDR49Q8IV35 697 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 ASAP3Q8TDY4 903 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 SPOCK2Q92563 424 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 USP6NLQ92738 828 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 PBXIP1Q96AQ6 731 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 PCDH9Q9HC56 1237 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 CYP4F12Q9HCS2 524 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 TMX2Q9Y320 296 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 NKRFO15226 690 aaKnown RBP eCLIP6.78□□□□□ -1.32
SMC1A-202ENST00000375340 CCDC130P13994 396 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 DPEP1P16444 411 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 TFE3P19532 575 aaPredicted RBP6.78□□□□□ -1.32
SMC1A-202ENST00000375340 TNFSF9P41273 254 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 NAMPTP43490 491 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 ABCG1P45844 678 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 GMPSP49915 693 aaPredicted RBP6.78□□□□□ -1.32
SMC1A-202ENST00000375340 CDK16Q00536 496 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 FAM182AQ5T1J6 154 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 MECRQ9BV79 373 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 SEMA6AQ9H2E6 1030 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 GRID1Q9ULK0 1009 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 MROH7Q68CQ1 1323 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 NCF1BA6NI72 391 aaPredicted RBP6.78□□□□□ -1.32
SMC1A-202ENST00000375340 NCF1CA8MVU1 366 aaPredicted RBP6.78□□□□□ -1.32
SMC1A-202ENST00000375340 SNX3O60493 162 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 SPAG6O75602 509 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 PSMG1O95456 288 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 ATXN8OSP0DMR3 200 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 NCF1P14598 390 aaPredicted RBP6.78□□□□□ -1.32
SMC1A-202ENST00000375340 GLRA2P23416 452 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 SERPINB8P50452 374 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 CDH8P55286 799 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 WASHC2DQ5SRD0 308 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 STRA8Q7Z7C7 330 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 KATNAL2Q8IYT4 538 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 PHLPP1O60346 1717 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 ROBO3Q96MS0 1386 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 RPTORQ8N122 1335 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 AP1G2O75843 785 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 MYCP01106 439 aaPredicted RBP6.78□□□□□ -1.32
SMC1A-202ENST00000375340 MAPTP10636 758 aaKnown RBP6.78□□□□□ -1.32
SMC1A-202ENST00000375340 TMTC4Q5T4D3 741 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 PDP2Q9P2J9 529 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 A0A1B0GUL6 1792 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 E5RI56 91 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 TPP1O14773 563 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 GARTP22102 1010 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 C16orf46Q6P387 395 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 MPZL3Q6UWV2 235 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 RXFP2Q8WXD0 754 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 FAM8A1Q9UBU6 413 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 SUN2Q9UH99 717 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 SLC24A2Q9UI40 661 aa6.78□□□□□ -1.32
SMC1A-202ENST00000375340 NR2E1Q9Y466 385 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms