RNA–Protein interactions for RNA: ENST00000375329.6

APOA1-205, Transcript of apolipoprotein A1, humanhuman

TSL 2 BASIC

Gene APOA1, Length 927 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-205ENST00000375329 FAM83CQ9BQN1 747 aa16.3■□□□□ 0.2
APOA1-205ENST00000375329 HSD3B7Q9H2F3 369 aa16.3■□□□□ 0.2
APOA1-205ENST00000375329 TMEM30AQ9NV96 361 aa16.3■□□□□ 0.2
APOA1-205ENST00000375329 IL37Q9NZH6 218 aa16.3■□□□□ 0.2
APOA1-205ENST00000375329 DLGAP2Q9P1A6 1054 aa16.3■□□□□ 0.2
APOA1-205ENST00000375329 CCL26Q9Y258 94 aa16.3■□□□□ 0.2
APOA1-205ENST00000375329 C2orf78A6NCI8 922 aa16.29■□□□□ 0.2
APOA1-205ENST00000375329 KCNJ18B7U540 433 aa16.29■□□□□ 0.2
APOA1-205ENST00000375329 H0Y858 1186 aa16.29■□□□□ 0.2
APOA1-205ENST00000375329 TNFRSF10BO14763 440 aa16.29■□□□□ 0.2
APOA1-205ENST00000375329 ATP1A3P13637 1013 aa16.29■□□□□ 0.2
APOA1-205ENST00000375329 CDK11BP21127 795 aaKnown RBP16.29■□□□□ 0.2
APOA1-205ENST00000375329 TARSP26639 723 aaKnown RBP16.29■□□□□ 0.2
APOA1-205ENST00000375329 MTIF2P46199 727 aaKnown RBP16.29■□□□□ 0.2
APOA1-205ENST00000375329 IFNAR2P48551 515 aa16.29■□□□□ 0.2
APOA1-205ENST00000375329 TUBP50607 506 aa16.29■□□□□ 0.2
APOA1-205ENST00000375329 SLC7A9P82251 487 aa16.29■□□□□ 0.2
APOA1-205ENST00000375329 NR1H3Q13133 447 aa16.29■□□□□ 0.2
APOA1-205ENST00000375329 LRRC32Q14392 662 aa16.29■□□□□ 0.2
APOA1-205ENST00000375329 KCNJ12Q14500 433 aa16.29■□□□□ 0.2
APOA1-205ENST00000375329 MTF1Q14872 753 aa16.29■□□□□ 0.2
APOA1-205ENST00000375329 ANGPT1Q15389 498 aa16.29■□□□□ 0.2
APOA1-205ENST00000375329 ZNF394Q53GI3 561 aa16.29■□□□□ 0.2
APOA1-205ENST00000375329 HECTD3Q5T447 861 aa16.29■□□□□ 0.2
APOA1-205ENST00000375329 SNX30Q5VWJ9 437 aa16.29■□□□□ 0.2
APOA1-205ENST00000375329 C1orf210Q8IVY1 113 aa16.29■□□□□ 0.2
APOA1-205ENST00000375329 TRIM59Q8IWR1 403 aa16.29■□□□□ 0.2
APOA1-205ENST00000375329 WHAMMQ8TF30 809 aa16.29■□□□□ 0.2
APOA1-205ENST00000375329 ZFYVE19Q96K21 471 aa16.29■□□□□ 0.2
APOA1-205ENST00000375329 TWNKQ96RR1 684 aa16.29■□□□□ 0.2
APOA1-205ENST00000375329 KIAA1257Q9ULG3 409 aa16.29■□□□□ 0.2
APOA1-205ENST00000375329 HELZP42694 1942 aaKnown RBP16.29■□□□□ 0.2
APOA1-205ENST00000375329 KIF26AQ9ULI4 1882 aaPredicted RBP16.29■□□□□ 0.2
APOA1-205ENST00000375329 FAM92AA1XBS5 289 aa16.28■□□□□ 0.2
APOA1-205ENST00000375329 SPECC1L-ADORA2AF8WAN1 911 aa16.28■□□□□ 0.2
APOA1-205ENST00000375329 SLC9A3R1O14745 358 aaPredicted RBP16.28■□□□□ 0.2
APOA1-205ENST00000375329 LRRN2O75325 713 aa16.28■□□□□ 0.2
APOA1-205ENST00000375329 AFPP02771 609 aaKnown RBP16.28■□□□□ 0.2
APOA1-205ENST00000375329 ZNF18P17022 549 aa16.28■□□□□ 0.2
APOA1-205ENST00000375329 CTHP32929 405 aa16.28■□□□□ 0.2
APOA1-205ENST00000375329 KCNH2Q12809 1159 aa16.28■□□□□ 0.2
APOA1-205ENST00000375329 USP4Q13107 963 aa16.28■□□□□ 0.2
APOA1-205ENST00000375329 RUNX3Q13761 415 aa16.28■□□□□ 0.2
APOA1-205ENST00000375329 ZNF77Q15935 545 aa16.28■□□□□ 0.2
APOA1-205ENST00000375329 TCP11X2Q5H9J9 407 aa16.28■□□□□ 0.2
APOA1-205ENST00000375329 DGKKQ5KSL6 1271 aa16.28■□□□□ 0.2
APOA1-205ENST00000375329 CLEC20AQ6ZU45 233 aa16.28■□□□□ 0.2
APOA1-205ENST00000375329 CPA6Q8N4T0 437 aa16.28■□□□□ 0.2
APOA1-205ENST00000375329 SCAMP5Q8TAC9 235 aa16.28■□□□□ 0.2
APOA1-205ENST00000375329 SH3RF2Q8TEC5 729 aa16.28■□□□□ 0.2
APOA1-205ENST00000375329 OSCP1Q8WVF1 389 aa16.28■□□□□ 0.2
APOA1-205ENST00000375329 ATP2A3Q93084 1043 aa16.28■□□□□ 0.2
APOA1-205ENST00000375329 SLC22A12Q96S37 553 aa16.28■□□□□ 0.2
APOA1-205ENST00000375329 DUSP16Q9BY84 665 aa16.28■□□□□ 0.2
APOA1-205ENST00000375329 TLR8Q9NR97 1041 aaKnown RBP16.28■□□□□ 0.2
APOA1-205ENST00000375329 SPATA6Q9NWH7 488 aaPredicted RBP16.28■□□□□ 0.2
APOA1-205ENST00000375329 DUS2Q9NX74 493 aaKnown RBP16.28■□□□□ 0.2
APOA1-205ENST00000375329 GTSE1Q9NYZ3 720 aa16.28■□□□□ 0.2
APOA1-205ENST00000375329 NDRG2Q9UN36 371 aaKnown RBP16.28■□□□□ 0.2
APOA1-205ENST00000375329 COL4A2P08572 1712 aa16.28■□□□□ 0.2
APOA1-205ENST00000375329 LAMTOR5O43504 91 aa16.27■□□□□ 0.2
APOA1-205ENST00000375329 OLFM2O95897 454 aa16.27■□□□□ 0.2
APOA1-205ENST00000375329 OAS1P00973 400 aaKnown RBP16.27■□□□□ 0.2
APOA1-205ENST00000375329 MBL2P11226 248 aaPredicted RBP16.27■□□□□ 0.2
APOA1-205ENST00000375329 PRKCSHP14314 528 aaPredicted RBP16.27■□□□□ 0.2
APOA1-205ENST00000375329 PSEN1P49768 467 aa16.27■□□□□ 0.2
APOA1-205ENST00000375329 RAD23BP54727 409 aa16.27■□□□□ 0.2
APOA1-205ENST00000375329 PPP2R5DQ14738 602 aa16.27■□□□□ 0.2
APOA1-205ENST00000375329 SGO2Q562F6 1265 aa16.27■□□□□ 0.2
APOA1-205ENST00000375329 PPP1R26Q5T8A7 1209 aaPredicted RBP16.27■□□□□ 0.2
APOA1-205ENST00000375329 ARHGAP17Q68EM7 881 aa16.27■□□□□ 0.2
APOA1-205ENST00000375329 SLC4A11Q8NBS3 891 aa16.27■□□□□ 0.2
APOA1-205ENST00000375329 EHBP1Q8NDI1 1231 aa16.27■□□□□ 0.2
APOA1-205ENST00000375329 ZMIZ2Q8NF64 920 aa16.27■□□□□ 0.2
APOA1-205ENST00000375329 FAM81BQ96LP2 452 aa16.27■□□□□ 0.2
APOA1-205ENST00000375329 PHOX2BQ99453 314 aa16.27■□□□□ 0.2
APOA1-205ENST00000375329 ARID3AQ99856 593 aa16.27■□□□□ 0.2
APOA1-205ENST00000375329 UBXN6Q9BZV1 441 aa16.27■□□□□ 0.2
APOA1-205ENST00000375329 NACA2Q9H009 215 aa16.27■□□□□ 0.2
APOA1-205ENST00000375329 TAB2Q9NYJ8 693 aa16.27■□□□□ 0.2
APOA1-205ENST00000375329 HESX1Q9UBX0 185 aa16.27■□□□□ 0.2
APOA1-205ENST00000375329 CHORDC1Q9UHD1 332 aaPredicted RBP16.27■□□□□ 0.2
APOA1-205ENST00000375329 SCML2Q9UQR0 700 aa16.27■□□□□ 0.2
APOA1-205ENST00000375329 MTF2Q9Y483 593 aaPredicted RBP16.27■□□□□ 0.2
APOA1-205ENST00000375329 PATJQ8NI35 1801 aa16.26■□□□□ 0.19
APOA1-205ENST00000375329 BEST1O76090 585 aa16.26■□□□□ 0.19
APOA1-205ENST00000375329 ZDHHC11BP0C7U3 371 aa16.26■□□□□ 0.19
APOA1-205ENST00000375329 ACO1P21399 889 aaKnown RBP16.26■□□□□ 0.19
APOA1-205ENST00000375329 EEF1GP26641 437 aaKnown RBP16.26■□□□□ 0.19
APOA1-205ENST00000375329 GCNT1Q02742 428 aa16.26■□□□□ 0.19
APOA1-205ENST00000375329 TNK2Q07912 1038 aa16.26■□□□□ 0.19
APOA1-205ENST00000375329 LRMPQ12912 555 aa16.26■□□□□ 0.19
APOA1-205ENST00000375329 KRT31Q15323 416 aa16.26■□□□□ 0.19
APOA1-205ENST00000375329 MAMSTRQ6ZN01 415 aa16.26■□□□□ 0.19
APOA1-205ENST00000375329 TADA2BQ86TJ2 420 aa16.26■□□□□ 0.19
APOA1-205ENST00000375329 PPM1KQ8N3J5 372 aa16.26■□□□□ 0.19
APOA1-205ENST00000375329 SYNPOQ8N3V7 929 aa16.26■□□□□ 0.19
APOA1-205ENST00000375329 ANKRD52Q8NB46 1076 aa16.26■□□□□ 0.19
APOA1-205ENST00000375329 TTC16Q8NEE8 873 aa16.26■□□□□ 0.19
APOA1-205ENST00000375329 CHRDQ9H2X0 955 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms