RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 SUPT20HL1Q3ZLR7 823 aa20.45■□□□□ 0.86
COL15A1-201ENST00000375001 CROCCP3Q8IVE0 287 aa20.45■□□□□ 0.86
COL15A1-201ENST00000375001 RORBQ92753 470 aa20.45■□□□□ 0.86
COL15A1-201ENST00000375001 KAZALD1Q96I82 304 aa20.45■□□□□ 0.86
COL15A1-201ENST00000375001 FAR2Q96K12 515 aa20.45■□□□□ 0.86
COL15A1-201ENST00000375001 TMCC3Q9ULS5 477 aa20.45■□□□□ 0.86
COL15A1-201ENST00000375001 RWDD3Q9Y3V2 267 aa20.45■□□□□ 0.86
COL15A1-201ENST00000375001 MYL3P08590 195 aa20.44■□□□□ 0.86
COL15A1-201ENST00000375001 TGM2P21980 687 aa20.44■□□□□ 0.86
COL15A1-201ENST00000375001 SMIM5Q71RC9 77 aa20.44■□□□□ 0.86
COL15A1-201ENST00000375001 SLC44A2Q8IWA5 706 aaPredicted RBP20.44■□□□□ 0.86
COL15A1-201ENST00000375001 KYQ8NBH2 561 aa20.44■□□□□ 0.86
COL15A1-201ENST00000375001 FEZF2Q8TBJ5 459 aa20.44■□□□□ 0.86
COL15A1-201ENST00000375001 MAGED4Q96JG8 741 aa20.44■□□□□ 0.86
COL15A1-201ENST00000375001 MAP3K13O43283 966 aa20.44■□□□□ 0.86
COL15A1-201ENST00000375001 LCA5LO95447 670 aa20.44■□□□□ 0.86
COL15A1-201ENST00000375001 MMP10P09238 476 aa20.44■□□□□ 0.86
COL15A1-201ENST00000375001 ST3GAL1Q11201 340 aa20.44■□□□□ 0.86
COL15A1-201ENST00000375001 TROAPQ12815 778 aa20.44■□□□□ 0.86
COL15A1-201ENST00000375001 C1DQ13901 141 aaKnown RBP20.44■□□□□ 0.86
COL15A1-201ENST00000375001 ATP6AP1LQ52LC2 224 aa20.44■□□□□ 0.86
COL15A1-201ENST00000375001 CACHD1Q5VU97 1274 aa20.44■□□□□ 0.86
COL15A1-201ENST00000375001 AHI1Q8N157 1196 aa20.44■□□□□ 0.86
COL15A1-201ENST00000375001 FAM45AQ8TCE6 357 aa20.44■□□□□ 0.86
COL15A1-201ENST00000375001 MASTLQ96GX5 879 aa20.44■□□□□ 0.86
COL15A1-201ENST00000375001 ZNF333Q96JL9 665 aa20.44■□□□□ 0.86
COL15A1-201ENST00000375001 FRMD8Q9BZ67 464 aaPredicted RBP20.44■□□□□ 0.86
COL15A1-201ENST00000375001 FLT1P17948 1338 aa20.44■□□□□ 0.86
COL15A1-201ENST00000375001 ITGB3BPQ13352 177 aaPredicted RBP20.44■□□□□ 0.86
COL15A1-201ENST00000375001 TRIM65Q6PJ69 517 aa20.44■□□□□ 0.86
COL15A1-201ENST00000375001 KRT77Q7Z794 578 aa20.44■□□□□ 0.86
COL15A1-201ENST00000375001 LDHDQ86WU2 507 aa20.44■□□□□ 0.86
COL15A1-201ENST00000375001 CAVIN3Q969G5 261 aa20.44■□□□□ 0.86
COL15A1-201ENST00000375001 QKIQ96PU8 341 aaKnown RBP eCLIP20.44■□□□□ 0.86
COL15A1-201ENST00000375001 CYP4F12Q9HCS2 524 aa20.44■□□□□ 0.86
COL15A1-201ENST00000375001 AVENQ9NQS1 362 aaPredicted RBP20.44■□□□□ 0.86
COL15A1-201ENST00000375001 RASA1P20936 1047 aa20.44■□□□□ 0.86
COL15A1-201ENST00000375001 VAC14Q08AM6 782 aa20.44■□□□□ 0.86
COL15A1-201ENST00000375001 VN1R5Q7Z5H4 357 aa20.44■□□□□ 0.86
COL15A1-201ENST00000375001 WDR36Q8NI36 951 aaKnown RBP20.44■□□□□ 0.86
COL15A1-201ENST00000375001 PACSIN1Q9BY11 444 aa20.44■□□□□ 0.86
COL15A1-201ENST00000375001 HMG20AQ9NP66 347 aa20.44■□□□□ 0.86
COL15A1-201ENST00000375001 NAGPAQ9UK23 515 aa20.44■□□□□ 0.86
COL15A1-201ENST00000375001 SNX9Q9Y5X1 595 aa20.44■□□□□ 0.86
COL15A1-201ENST00000375001 HEATR9A2RTY3 570 aa20.43■□□□□ 0.86
COL15A1-201ENST00000375001 PTGES3LE9PB15 166 aa20.43■□□□□ 0.86
COL15A1-201ENST00000375001 RGS2P41220 211 aa20.43■□□□□ 0.86
COL15A1-201ENST00000375001 SHROOM1Q2M3G4 852 aaPredicted RBP20.43■□□□□ 0.86
COL15A1-201ENST00000375001 AKIRIN2Q53H80 203 aa20.43■□□□□ 0.86
COL15A1-201ENST00000375001 KCNT1Q5JUK3 1230 aa20.43■□□□□ 0.86
COL15A1-201ENST00000375001 AGAP9Q5VTM2 703 aa20.43■□□□□ 0.86
COL15A1-201ENST00000375001 ARHGAP27Q6ZUM4 889 aa20.43■□□□□ 0.86
COL15A1-201ENST00000375001 FAM49BQ9NUQ9 324 aa20.43■□□□□ 0.86
COL15A1-201ENST00000375001 FSBPO95073 299 aa20.43■□□□□ 0.86
COL15A1-201ENST00000375001 CBX6O95503 412 aa20.43■□□□□ 0.86
COL15A1-201ENST00000375001 RPL10AP62906 217 aaKnown RBP20.43■□□□□ 0.86
COL15A1-201ENST00000375001 TRAF3Q13114 568 aa20.43■□□□□ 0.86
COL15A1-201ENST00000375001 KLHL12Q53G59 568 aa20.43■□□□□ 0.86
COL15A1-201ENST00000375001 AGKQ53H12 422 aa20.43■□□□□ 0.86
COL15A1-201ENST00000375001 PCNX4Q63HM2 1172 aa20.43■□□□□ 0.86
COL15A1-201ENST00000375001 WHRNQ9P202 907 aa20.43■□□□□ 0.86
COL15A1-201ENST00000375001 FCHO1O14526 889 aa20.43■□□□□ 0.86
COL15A1-201ENST00000375001 PSMA3P25788 255 aa20.43■□□□□ 0.86
COL15A1-201ENST00000375001 RNF148Q8N7C7 305 aa20.43■□□□□ 0.86
COL15A1-201ENST00000375001 C1orf131Q8NDD1 294 aaKnown RBP20.43■□□□□ 0.86
COL15A1-201ENST00000375001 RBM46Q8TBY0 533 aaKnown RBP20.43■□□□□ 0.86
COL15A1-201ENST00000375001 ECE2O60344 883 aa20.43■□□□□ 0.86
COL15A1-201ENST00000375001 H2AFYO75367 372 aaKnown RBP20.43■□□□□ 0.86
COL15A1-201ENST00000375001 PRLRP16471 622 aa20.43■□□□□ 0.86
COL15A1-201ENST00000375001 KRT20P35900 424 aa20.43■□□□□ 0.86
COL15A1-201ENST00000375001 FEN1P39748 380 aaKnown RBP20.43■□□□□ 0.86
COL15A1-201ENST00000375001 TBC1D19Q8N5T2 526 aa20.43■□□□□ 0.86
COL15A1-201ENST00000375001 OR6Y1Q8NGX8 325 aa20.43■□□□□ 0.86
COL15A1-201ENST00000375001 UTP15Q8TED0 518 aaKnown RBP20.43■□□□□ 0.86
COL15A1-201ENST00000375001 PCDHA10Q9Y5I2 948 aa20.43■□□□□ 0.86
COL15A1-201ENST00000375001 CPS1P31327 1500 aa20.43■□□□□ 0.86
COL15A1-201ENST00000375001 PNMA8CA0A1B0GUJ8 204 aa20.43■□□□□ 0.86
COL15A1-201ENST00000375001 CCT8P50990 548 aa20.43■□□□□ 0.86
COL15A1-201ENST00000375001 ALFQ53S48 1182 aa20.43■□□□□ 0.86
COL15A1-201ENST00000375001 C11orf63Q6NUN7 778 aa20.43■□□□□ 0.86
COL15A1-201ENST00000375001 ZNF560Q96MR9 790 aa20.43■□□□□ 0.86
COL15A1-201ENST00000375001 NRDE2Q9H7Z3 1164 aa20.43■□□□□ 0.86
COL15A1-201ENST00000375001 GTF2A1LQ9UNN4 478 aa20.43■□□□□ 0.86
COL15A1-201ENST00000375001 PDE9AO76083 593 aa20.42■□□□□ 0.86
COL15A1-201ENST00000375001 RGS21Q2M5E4 152 aa20.42■□□□□ 0.86
COL15A1-201ENST00000375001 NAPEPLDQ6IQ20 393 aa20.42■□□□□ 0.86
COL15A1-201ENST00000375001 NEK10Q6ZWH5 1172 aa20.42■□□□□ 0.86
COL15A1-201ENST00000375001 LRRC71Q8N4P6 559 aa20.42■□□□□ 0.86
COL15A1-201ENST00000375001 GPRC5DQ9NZD1 345 aa20.42■□□□□ 0.86
COL15A1-201ENST00000375001 C21orf2O43822 256 aa20.42■□□□□ 0.86
COL15A1-201ENST00000375001 SASH3O75995 380 aa20.42■□□□□ 0.86
COL15A1-201ENST00000375001 FXR2P51116 673 aaKnown RBP eCLIP20.42■□□□□ 0.86
COL15A1-201ENST00000375001 AKR1D1P51857 326 aa20.42■□□□□ 0.86
COL15A1-201ENST00000375001 PREPLQ4J6C6 727 aaPredicted RBP20.42■□□□□ 0.86
COL15A1-201ENST00000375001 RNF149Q8NC42 400 aa20.42■□□□□ 0.86
COL15A1-201ENST00000375001 ITGAXP20702 1163 aa20.42■□□□□ 0.86
COL15A1-201ENST00000375001 CLEC16AQ2KHT3 1053 aa20.42■□□□□ 0.86
COL15A1-201ENST00000375001 CDKAL1Q5VV42 579 aa20.42■□□□□ 0.86
COL15A1-201ENST00000375001 GPAT2Q6NUI2 795 aa20.42■□□□□ 0.86
COL15A1-201ENST00000375001 FASTKD5Q7L8L6 764 aaKnown RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms