RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 HIST1H2AGP0C0S8 130 aaPredicted RBP20.22■□□□□ 0.83
TGFBR1-201ENST00000374990 HIST1H2ADP20671 130 aa20.22■□□□□ 0.83
TGFBR1-201ENST00000374990 PCSK7Q16549 785 aa20.22■□□□□ 0.83
TGFBR1-201ENST00000374990 HIST1H2AHQ96KK5 128 aa20.22■□□□□ 0.83
TGFBR1-201ENST00000374990 HIST1H2AJQ99878 128 aa20.22■□□□□ 0.83
TGFBR1-201ENST00000374990 H2AFJQ9BTM1 129 aa20.22■□□□□ 0.83
TGFBR1-201ENST00000374990 CXorf56Q9H5V9 222 aa20.22■□□□□ 0.83
TGFBR1-201ENST00000374990 GPATCH2LQ9NWQ4 482 aa20.22■□□□□ 0.83
TGFBR1-201ENST00000374990 TSPAN16Q9UKR8 245 aa20.22■□□□□ 0.83
TGFBR1-201ENST00000374990 ZC3H4Q9UPT8 1303 aaKnown RBP20.22■□□□□ 0.83
TGFBR1-201ENST00000374990 CPA2P48052 419 aa20.22■□□□□ 0.83
TGFBR1-201ENST00000374990 IL31Q6EBC2 164 aa20.22■□□□□ 0.83
TGFBR1-201ENST00000374990 DENND5BQ6ZUT9 1274 aa20.22■□□□□ 0.83
TGFBR1-201ENST00000374990 TMEM161BQ8NDZ6 487 aa20.22■□□□□ 0.83
TGFBR1-201ENST00000374990 KAT5Q92993 513 aa20.22■□□□□ 0.83
TGFBR1-201ENST00000374990 HES6Q96HZ4 224 aa20.22■□□□□ 0.83
TGFBR1-201ENST00000374990 KLK14Q9P0G3 267 aa20.22■□□□□ 0.83
TGFBR1-201ENST00000374990 KCNH4Q9UQ05 1017 aa20.22■□□□□ 0.83
TGFBR1-201ENST00000374990 APOC4-APOC2K7ER74 178 aa20.21■□□□□ 0.83
TGFBR1-201ENST00000374990 TBC1D12O60347 775 aa20.21■□□□□ 0.83
TGFBR1-201ENST00000374990 APOC2P02655 101 aa20.21■□□□□ 0.83
TGFBR1-201ENST00000374990 THRAP10827 490 aa20.21■□□□□ 0.83
TGFBR1-201ENST00000374990 PTPN4P29074 926 aa20.21■□□□□ 0.83
TGFBR1-201ENST00000374990 ALDH5A1P51649 535 aaPredicted RBP20.21■□□□□ 0.83
TGFBR1-201ENST00000374990 RTP1P59025 263 aa20.21■□□□□ 0.83
TGFBR1-201ENST00000374990 DENND1BQ6P3S1 775 aa20.21■□□□□ 0.83
TGFBR1-201ENST00000374990 C12orf56Q8IXR9 622 aa20.21■□□□□ 0.83
TGFBR1-201ENST00000374990 MYO5BQ9ULV0 1848 aa20.21■□□□□ 0.83
TGFBR1-201ENST00000374990 MON2Q7Z3U7 1717 aa20.21■□□□□ 0.83
TGFBR1-201ENST00000374990 TMEM150BA6NC51 233 aa20.21■□□□□ 0.83
TGFBR1-201ENST00000374990 LHX1P48742 406 aa20.21■□□□□ 0.83
TGFBR1-201ENST00000374990 C6orf10Q5SRN2 563 aa20.21■□□□□ 0.83
TGFBR1-201ENST00000374990 ADGRF2Q8IZF7 708 aa20.21■□□□□ 0.83
TGFBR1-201ENST00000374990 ZCCHC9Q8N567 271 aaKnown RBP20.21■□□□□ 0.83
TGFBR1-201ENST00000374990 ANKRD27Q96NW4 1050 aa20.21■□□□□ 0.83
TGFBR1-201ENST00000374990 UBE2OQ9C0C9 1292 aaKnown RBP20.21■□□□□ 0.83
TGFBR1-201ENST00000374990 GGA2Q9UJY4 613 aa20.21■□□□□ 0.83
TGFBR1-201ENST00000374990 CYB561D2O14569 222 aa20.21■□□□□ 0.83
TGFBR1-201ENST00000374990 PMPCBO75439 489 aa20.21■□□□□ 0.83
TGFBR1-201ENST00000374990 CYBBP04839 570 aa20.21■□□□□ 0.83
TGFBR1-201ENST00000374990 IFI35P80217 286 aaPredicted RBP20.21■□□□□ 0.83
TGFBR1-201ENST00000374990 AASDHQ4L235 1098 aaPredicted RBP20.21■□□□□ 0.83
TGFBR1-201ENST00000374990 TMCO4Q5TGY1 634 aa20.21■□□□□ 0.83
TGFBR1-201ENST00000374990 MRNIPQ6NTE8 343 aa20.21■□□□□ 0.83
TGFBR1-201ENST00000374990 PLEKHH3Q7Z736 793 aa20.21■□□□□ 0.83
TGFBR1-201ENST00000374990 LRRC39Q96DD0 335 aa20.21■□□□□ 0.83
TGFBR1-201ENST00000374990 PPP1R36Q96LQ0 422 aa20.21■□□□□ 0.83
TGFBR1-201ENST00000374990 WDR18Q9BV38 432 aa20.21■□□□□ 0.83
TGFBR1-201ENST00000374990 DNAJC6O75061 913 aa20.21■□□□□ 0.83
TGFBR1-201ENST00000374990 LYPLA2O95372 231 aa20.21■□□□□ 0.83
TGFBR1-201ENST00000374990 RBBP7Q16576 425 aa20.21■□□□□ 0.83
TGFBR1-201ENST00000374990 ATP6V0D2Q8N8Y2 350 aa20.21■□□□□ 0.83
TGFBR1-201ENST00000374990 RIC8BQ9NVN3 520 aa20.21■□□□□ 0.83
TGFBR1-201ENST00000374990 STX18Q9P2W9 335 aaKnown RBP20.21■□□□□ 0.83
TGFBR1-201ENST00000374990 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.21■□□□□ 0.838e-6■■■□□ 15.8
TGFBR1-201ENST00000374990 CYP1A2P05177 515 aa20.2■□□□□ 0.82
TGFBR1-201ENST00000374990 RRP1BQ14684 758 aaKnown RBP20.2■□□□□ 0.82
TGFBR1-201ENST00000374990 NFIL3Q16649 462 aa20.2■□□□□ 0.82
TGFBR1-201ENST00000374990 TIGD7Q6NT04 549 aaPredicted RBP20.2■□□□□ 0.82
TGFBR1-201ENST00000374990 TATDN1Q6P1N9 297 aa20.2■□□□□ 0.82
TGFBR1-201ENST00000374990 APLFQ8IW19 511 aaPredicted RBP20.2■□□□□ 0.82
TGFBR1-201ENST00000374990 STKLD1Q8NE28 680 aa20.2■□□□□ 0.82
TGFBR1-201ENST00000374990 ABTB1Q969K4 478 aaPredicted RBP20.2■□□□□ 0.82
TGFBR1-201ENST00000374990 GPBP1L1Q9HC44 474 aaPredicted RBP20.2■□□□□ 0.82
TGFBR1-201ENST00000374990 OLA1Q9NTK5 396 aaKnown RBP20.2■□□□□ 0.82
TGFBR1-201ENST00000374990 STRNO43815 780 aa20.2■□□□□ 0.82
TGFBR1-201ENST00000374990 SRP72O76094 671 aaKnown RBP20.2■□□□□ 0.82
TGFBR1-201ENST00000374990 ELK3P41970 407 aa20.2■□□□□ 0.82
TGFBR1-201ENST00000374990 HDAC4P56524 1084 aa20.2■□□□□ 0.82
TGFBR1-201ENST00000374990 LRRC36Q1X8D7 754 aa20.2■□□□□ 0.82
TGFBR1-201ENST00000374990 ACCSLQ4AC99 568 aa20.2■□□□□ 0.82
TGFBR1-201ENST00000374990 CHST7Q9NS84 486 aa20.2■□□□□ 0.82
TGFBR1-201ENST00000374990 GPR182O15218 404 aa20.2■□□□□ 0.82
TGFBR1-201ENST00000374990 PLA2G6O60733 806 aa20.2■□□□□ 0.82
TGFBR1-201ENST00000374990 ZBTB17Q13105 803 aa20.2■□□□□ 0.82
TGFBR1-201ENST00000374990 YTHDF3Q7Z739 585 aaKnown RBP20.2■□□□□ 0.82
TGFBR1-201ENST00000374990 LNX1Q8TBB1 728 aaPredicted RBP20.2■□□□□ 0.82
TGFBR1-201ENST00000374990 ACTL7BQ9Y614 415 aa20.2■□□□□ 0.82
TGFBR1-201ENST00000374990 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.2■□□□□ 0.82
TGFBR1-201ENST00000374990 RBAK-RBAKDNI3L0D1 243 aa20.2■□□□□ 0.82
TGFBR1-201ENST00000374990 TGFB1I1O43294 461 aa20.2■□□□□ 0.82
TGFBR1-201ENST00000374990 SYF2O95926 243 aaKnown RBP20.2■□□□□ 0.82
TGFBR1-201ENST00000374990 VTNP04004 478 aa20.2■□□□□ 0.82
TGFBR1-201ENST00000374990 TM4SF1P30408 202 aa20.2■□□□□ 0.82
TGFBR1-201ENST00000374990 NDST1P52848 882 aa20.2■□□□□ 0.82
TGFBR1-201ENST00000374990 MTFR1Q15390 333 aa20.2■□□□□ 0.82
TGFBR1-201ENST00000374990 LRRC19Q9H756 370 aa20.2■□□□□ 0.82
TGFBR1-201ENST00000374990 DNPEPQ9ULA0 475 aa20.2■□□□□ 0.82
TGFBR1-201ENST00000374990 MAGEB16A2A368 324 aa20.2■□□□□ 0.82
TGFBR1-201ENST00000374990 PKD2L2Q9NZM6 624 aa20.2■□□□□ 0.82
TGFBR1-201ENST00000374990 EIF4E1BA6NMX2 242 aaKnown RBP20.19■□□□□ 0.82
TGFBR1-201ENST00000374990 RALBP11234 206 aa20.19■□□□□ 0.82
TGFBR1-201ENST00000374990 NR2C2P49116 596 aa20.19■□□□□ 0.82
TGFBR1-201ENST00000374990 AMHR2Q16671 573 aa20.19■□□□□ 0.82
TGFBR1-201ENST00000374990 EFCAB1Q9HAE3 211 aa20.19■□□□□ 0.82
TGFBR1-201ENST00000374990 LATS2Q9NRM7 1088 aa20.19■□□□□ 0.82
TGFBR1-201ENST00000374990 PCDHB8Q9UN66 801 aa20.19■□□□□ 0.82
TGFBR1-201ENST00000374990 DRG1Q9Y295 367 aaKnown RBP20.19■□□□□ 0.82
TGFBR1-201ENST00000374990 IFT172Q9UG01 1749 aa20.19■□□□□ 0.82
TGFBR1-201ENST00000374990 RNF225M0QZC1 329 aaPredicted RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms