RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 FHOD1Q9Y613 1164 aa22.14■■□□□ 1.13
MAP1LC3A-202ENST00000374837 XPO1O14980 1071 aaKnown RBP22.13■■□□□ 1.13
MAP1LC3A-202ENST00000374837 USP17L7P0C7H9 530 aa22.13■■□□□ 1.13
MAP1LC3A-202ENST00000374837 UCHL3P15374 230 aa22.13■■□□□ 1.13
MAP1LC3A-202ENST00000374837 PFKLP17858 780 aa22.13■■□□□ 1.13
MAP1LC3A-202ENST00000374837 UBXN1Q04323 297 aa22.13■■□□□ 1.13
MAP1LC3A-202ENST00000374837 SNX30Q5VWJ9 437 aa22.13■■□□□ 1.13
MAP1LC3A-202ENST00000374837 SMYD5Q6GMV2 418 aa22.13■■□□□ 1.13
MAP1LC3A-202ENST00000374837 NAA15Q9BXJ9 866 aaKnown RBP22.13■■□□□ 1.13
MAP1LC3A-202ENST00000374837 RNF38Q9H0F5 515 aa22.13■■□□□ 1.13
MAP1LC3A-202ENST00000374837 WNT16Q9UBV4 365 aa22.13■■□□□ 1.13
MAP1LC3A-202ENST00000374837 FBXL21Q9UKT6 434 aa22.13■■□□□ 1.13
MAP1LC3A-202ENST00000374837 SIK3Q9Y2K2 1263 aa22.13■■□□□ 1.13
MAP1LC3A-202ENST00000374837 USP3Q9Y6I4 520 aa22.13■■□□□ 1.13
MAP1LC3A-202ENST00000374837 CYP26A1O43174 497 aa22.12■■□□□ 1.13
MAP1LC3A-202ENST00000374837 OAS1P00973 400 aaKnown RBP22.12■■□□□ 1.13
MAP1LC3A-202ENST00000374837 CKMP06732 381 aa22.12■■□□□ 1.13
MAP1LC3A-202ENST00000374837 SETSIPP0DME0 302 aa22.12■■□□□ 1.13
MAP1LC3A-202ENST00000374837 GDI1P31150 447 aa22.12■■□□□ 1.13
MAP1LC3A-202ENST00000374837 ZNF268Q14587 947 aaPredicted RBP22.12■■□□□ 1.13
MAP1LC3A-202ENST00000374837 DRAP1Q14919 205 aaPredicted RBP22.12■■□□□ 1.13
MAP1LC3A-202ENST00000374837 RAB41Q5JT25 222 aa22.12■■□□□ 1.13
MAP1LC3A-202ENST00000374837 LUZP1Q86V48 1076 aa22.12■■□□□ 1.13
MAP1LC3A-202ENST00000374837 BPIFB1Q8TDL5 484 aa22.12■■□□□ 1.13
MAP1LC3A-202ENST00000374837 SLC35F5Q8WV83 523 aa22.12■■□□□ 1.13
MAP1LC3A-202ENST00000374837 ZNF606Q8WXB4 792 aa22.12■■□□□ 1.13
MAP1LC3A-202ENST00000374837 GANQ9H2C0 597 aa22.12■■□□□ 1.13
MAP1LC3A-202ENST00000374837 WDFY4Q6ZS81 3184 aa22.12■■□□□ 1.13
MAP1LC3A-202ENST00000374837 M0QYV0 167 aa22.11■■□□□ 1.13
MAP1LC3A-202ENST00000374837 CAVIN2O95810 425 aa22.11■■□□□ 1.13
MAP1LC3A-202ENST00000374837 PNMA6AP0CW24 399 aaPredicted RBP22.11■■□□□ 1.13
MAP1LC3A-202ENST00000374837 GNA15P30679 374 aa22.11■■□□□ 1.13
MAP1LC3A-202ENST00000374837 PLA2G4AP47712 749 aa22.11■■□□□ 1.13
MAP1LC3A-202ENST00000374837 PDE6CP51160 858 aa22.11■■□□□ 1.13
MAP1LC3A-202ENST00000374837 FCHO2Q0JRZ9 810 aa22.11■■□□□ 1.13
MAP1LC3A-202ENST00000374837 RAPGEF1Q13905 1077 aa22.11■■□□□ 1.13
MAP1LC3A-202ENST00000374837 SYCP1Q15431 976 aa22.11■■□□□ 1.13
MAP1LC3A-202ENST00000374837 HECTD3Q5T447 861 aa22.11■■□□□ 1.13
MAP1LC3A-202ENST00000374837 IER5LQ5T953 404 aa22.11■■□□□ 1.13
MAP1LC3A-202ENST00000374837 CCDC186Q7Z3E2 898 aa22.11■■□□□ 1.13
MAP1LC3A-202ENST00000374837 YAF2Q8IY57 180 aa22.11■■□□□ 1.13
MAP1LC3A-202ENST00000374837 FAM71AQ8IYT1 594 aa22.11■■□□□ 1.13
MAP1LC3A-202ENST00000374837 SECISBP2LQ93073 1101 aaKnown RBP22.11■■□□□ 1.13
MAP1LC3A-202ENST00000374837 BRD9Q9H8M2 597 aa22.11■■□□□ 1.13
MAP1LC3A-202ENST00000374837 KIF9Q9HAQ2 790 aa22.11■■□□□ 1.13
MAP1LC3A-202ENST00000374837 TLR8Q9NR97 1041 aaKnown RBP22.11■■□□□ 1.13
MAP1LC3A-202ENST00000374837 CA14Q9ULX7 337 aa22.11■■□□□ 1.13
MAP1LC3A-202ENST00000374837 ZNF263O14978 683 aa22.1■■□□□ 1.13
MAP1LC3A-202ENST00000374837 THAP12O43422 761 aa22.1■■□□□ 1.13
MAP1LC3A-202ENST00000374837 MED7O43513 233 aa22.1■■□□□ 1.13
MAP1LC3A-202ENST00000374837 OLFM2O95897 454 aa22.1■■□□□ 1.13
MAP1LC3A-202ENST00000374837 PDGFBP01127 241 aaPredicted RBP22.1■■□□□ 1.13
MAP1LC3A-202ENST00000374837 RFX1P22670 979 aa22.1■■□□□ 1.13
MAP1LC3A-202ENST00000374837 CLCN1P35523 988 aa22.1■■□□□ 1.13
MAP1LC3A-202ENST00000374837 TKTL1P51854 596 aa22.1■■□□□ 1.13
MAP1LC3A-202ENST00000374837 SLC7A9P82251 487 aa22.1■■□□□ 1.13
MAP1LC3A-202ENST00000374837 PFKPQ01813 784 aa22.1■■□□□ 1.13
MAP1LC3A-202ENST00000374837 DENND1BQ6P3S1 775 aa22.1■■□□□ 1.13
MAP1LC3A-202ENST00000374837 SCD5Q86SK9 330 aa22.1■■□□□ 1.13
MAP1LC3A-202ENST00000374837 RIN3Q8TB24 985 aa22.1■■□□□ 1.13
MAP1LC3A-202ENST00000374837 KCTD13Q8WZ19 329 aa22.1■■□□□ 1.13
MAP1LC3A-202ENST00000374837 PBXIP1Q96AQ6 731 aa22.1■■□□□ 1.13
MAP1LC3A-202ENST00000374837 ERGIC2Q96RQ1 377 aa22.1■■□□□ 1.13
MAP1LC3A-202ENST00000374837 STK33Q9BYT3 514 aa22.1■■□□□ 1.13
MAP1LC3A-202ENST00000374837 KCNH6Q9H252 994 aa22.1■■□□□ 1.13
MAP1LC3A-202ENST00000374837 CCSER2Q9H7U1 834 aa22.1■■□□□ 1.13
MAP1LC3A-202ENST00000374837 NMUR1Q9HB89 426 aa22.1■■□□□ 1.13
MAP1LC3A-202ENST00000374837 LRRC4Q9HBW1 653 aa22.1■■□□□ 1.13
MAP1LC3A-202ENST00000374837 FAM207AQ9NSI2 230 aaPredicted RBP22.1■■□□□ 1.13
MAP1LC3A-202ENST00000374837 OSER1Q9NX31 292 aa22.1■■□□□ 1.13
MAP1LC3A-202ENST00000374837 ARHGAP26Q9UNA1 814 aa22.1■■□□□ 1.13
MAP1LC3A-202ENST00000374837 A0A1W2PQH9 124 aa22.09■■□□□ 1.13
MAP1LC3A-202ENST00000374837 KRBA1A5PL33 1030 aa22.09■■□□□ 1.13
MAP1LC3A-202ENST00000374837 EPHB6O15197 1021 aa22.09■■□□□ 1.13
MAP1LC3A-202ENST00000374837 CHADO15335 359 aa22.09■■□□□ 1.13
MAP1LC3A-202ENST00000374837 TEX33O43247 280 aa22.09■■□□□ 1.13
MAP1LC3A-202ENST00000374837 COCHO43405 550 aa22.09■■□□□ 1.13
MAP1LC3A-202ENST00000374837 GABBR2O75899 941 aa22.09■■□□□ 1.13
MAP1LC3A-202ENST00000374837 RGS7P49802 495 aa22.09■■□□□ 1.13
MAP1LC3A-202ENST00000374837 POLR2FP61218 127 aaKnown RBP22.09■■□□□ 1.13
MAP1LC3A-202ENST00000374837 ZXDBP98169 803 aa22.09■■□□□ 1.13
MAP1LC3A-202ENST00000374837 PTK2Q05397 1052 aa22.09■■□□□ 1.13
MAP1LC3A-202ENST00000374837 SLC44A4Q53GD3 710 aa22.09■■□□□ 1.13
MAP1LC3A-202ENST00000374837 PMF1Q6P1K2 205 aa22.09■■□□□ 1.13
MAP1LC3A-202ENST00000374837 HFE2Q6ZVN8 426 aa22.09■■□□□ 1.13
MAP1LC3A-202ENST00000374837 BMP8AQ7Z5Y6 402 aa22.09■■□□□ 1.13
MAP1LC3A-202ENST00000374837 SIX5Q8N196 739 aa22.09■■□□□ 1.13
MAP1LC3A-202ENST00000374837 IRF7Q92985 503 aa22.09■■□□□ 1.13
MAP1LC3A-202ENST00000374837 ZFYVE19Q96K21 471 aa22.09■■□□□ 1.13
MAP1LC3A-202ENST00000374837 PCMTD1Q96MG8 357 aaPredicted RBP22.09■■□□□ 1.13
MAP1LC3A-202ENST00000374837 ULBP1Q9BZM6 244 aa22.09■■□□□ 1.13
MAP1LC3A-202ENST00000374837 RTN4Q9NQC3 1192 aaKnown RBP22.09■■□□□ 1.13
MAP1LC3A-202ENST00000374837 GREB1Q4ZG55 1949 aa22.08■■□□□ 1.13
MAP1LC3A-202ENST00000374837 GPD2P43304 727 aa22.08■■□□□ 1.13
MAP1LC3A-202ENST00000374837 TUBP50607 506 aa22.08■■□□□ 1.13
MAP1LC3A-202ENST00000374837 ARHGAP29Q52LW3 1261 aa22.08■■□□□ 1.13
MAP1LC3A-202ENST00000374837 PM20D1Q6GTS8 502 aa22.08■■□□□ 1.13
MAP1LC3A-202ENST00000374837 SLC47A2Q86VL8 602 aa22.08■■□□□ 1.13
MAP1LC3A-202ENST00000374837 SH3RF2Q8TEC5 729 aa22.08■■□□□ 1.13
MAP1LC3A-202ENST00000374837 NDRG1Q92597 394 aaKnown RBP22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms