RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 E7ESA3 106 aa13.16□□□□□ -0.3
PRPF4-202ENST00000374199 SHBGP04278 402 aa13.16□□□□□ -0.3
PRPF4-202ENST00000374199 SKIP12755 728 aa13.16□□□□□ -0.3
PRPF4-202ENST00000374199 LHX1P48742 406 aa13.16□□□□□ -0.3
PRPF4-202ENST00000374199 MORF4L2Q15014 288 aa13.16□□□□□ -0.3
PRPF4-202ENST00000374199 RASA2Q15283 850 aa13.16□□□□□ -0.3
PRPF4-202ENST00000374199 BEND5Q7L4P6 421 aa13.16□□□□□ -0.3
PRPF4-202ENST00000374199 HOOK3Q86VS8 718 aa13.16□□□□□ -0.3
PRPF4-202ENST00000374199 CCDC50Q8IVM0 306 aa13.16□□□□□ -0.3
PRPF4-202ENST00000374199 KLHL11Q9NVR0 708 aa13.16□□□□□ -0.3
PRPF4-202ENST00000374199 RCOR3Q9P2K3 495 aaPredicted RBP13.16□□□□□ -0.3
PRPF4-202ENST00000374199 ZMYND8Q9ULU4 1186 aaPredicted RBP13.16□□□□□ -0.3
PRPF4-202ENST00000374199 SHOC2Q9UQ13 582 aa13.16□□□□□ -0.3
PRPF4-202ENST00000374199 PTPN22Q9Y2R2 807 aa13.16□□□□□ -0.3
PRPF4-202ENST00000374199 PTCH2Q9Y6C5 1203 aa13.16□□□□□ -0.3
PRPF4-202ENST00000374199 VWA8A3KMH1 1905 aa13.16□□□□□ -0.3
PRPF4-202ENST00000374199 SMAPO00193 183 aa13.15□□□□□ -0.3
PRPF4-202ENST00000374199 THP07101 528 aa13.15□□□□□ -0.3
PRPF4-202ENST00000374199 PTPN1P18031 435 aaKnown RBP13.15□□□□□ -0.3
PRPF4-202ENST00000374199 MLH1P40692 756 aa13.15□□□□□ -0.3
PRPF4-202ENST00000374199 ITGA7Q13683 1181 aa13.15□□□□□ -0.3
PRPF4-202ENST00000374199 KCTD19Q17RG1 926 aaPredicted RBP13.15□□□□□ -0.3
PRPF4-202ENST00000374199 FAM47CQ5HY64 1035 aa13.15□□□□□ -0.3
PRPF4-202ENST00000374199 ARTNQ5T4W7 220 aa13.15□□□□□ -0.3
PRPF4-202ENST00000374199 CLEC20AQ6ZU45 233 aa13.15□□□□□ -0.3
PRPF4-202ENST00000374199 HACE1Q8IYU2 909 aa13.15□□□□□ -0.3
PRPF4-202ENST00000374199 PLD5Q8N7P1 536 aa13.15□□□□□ -0.3
PRPF4-202ENST00000374199 OR6B3Q8NGW1 331 aa13.15□□□□□ -0.3
PRPF4-202ENST00000374199 CAPNS2Q96L46 248 aa13.15□□□□□ -0.3
PRPF4-202ENST00000374199 DNAI2Q9GZS0 605 aa13.15□□□□□ -0.3
PRPF4-202ENST00000374199 HESX1Q9UBX0 185 aa13.15□□□□□ -0.3
PRPF4-202ENST00000374199 PHF24Q9UPV7 400 aa13.15□□□□□ -0.3
PRPF4-202ENST00000374199 PDGFRAP16234 1089 aa13.15□□□□□ -0.3
PRPF4-202ENST00000374199 NPR3P17342 541 aa13.15□□□□□ -0.3
PRPF4-202ENST00000374199 TGM2P21980 687 aa13.15□□□□□ -0.3
PRPF4-202ENST00000374199 DSC1Q08554 894 aa13.15□□□□□ -0.3
PRPF4-202ENST00000374199 GRIK3Q13003 919 aa13.15□□□□□ -0.3
PRPF4-202ENST00000374199 MBTPS1Q14703 1052 aa13.15□□□□□ -0.3
PRPF4-202ENST00000374199 GOLGA6L1Q8N7Z2 621 aa13.15□□□□□ -0.3
PRPF4-202ENST00000374199 SLC2A14Q8TDB8 520 aa13.15□□□□□ -0.3
PRPF4-202ENST00000374199 RNF157Q96PX1 679 aa13.15□□□□□ -0.3
PRPF4-202ENST00000374199 B3GNT5Q9BYG0 378 aa13.15□□□□□ -0.3
PRPF4-202ENST00000374199 FAM49BQ9NUQ9 324 aa13.15□□□□□ -0.3
PRPF4-202ENST00000374199 LGALS13Q9UHV8 139 aa13.15□□□□□ -0.3
PRPF4-202ENST00000374199 CDH9Q9ULB4 789 aa13.15□□□□□ -0.3
PRPF4-202ENST00000374199 ATP8A1Q9Y2Q0 1164 aa13.15□□□□□ -0.3
PRPF4-202ENST00000374199 LRRD1A4D1F6 860 aa13.15□□□□□ -0.31
PRPF4-202ENST00000374199 CYB561D2O14569 222 aa13.15□□□□□ -0.31
PRPF4-202ENST00000374199 HUS1O60921 280 aa13.15□□□□□ -0.31
PRPF4-202ENST00000374199 TTC4O95801 387 aa13.15□□□□□ -0.31
PRPF4-202ENST00000374199 ATF2P15336 505 aa13.15□□□□□ -0.31
PRPF4-202ENST00000374199 CDK7P50613 346 aa13.15□□□□□ -0.31
PRPF4-202ENST00000374199 CLCNKBP51801 687 aa13.15□□□□□ -0.31
PRPF4-202ENST00000374199 SNX1Q13596 522 aa13.15□□□□□ -0.31
PRPF4-202ENST00000374199 PPP1R7Q15435 360 aa13.15□□□□□ -0.31
PRPF4-202ENST00000374199 C15orf59Q2T9L4 293 aaPredicted RBP13.15□□□□□ -0.31
PRPF4-202ENST00000374199 CEP128Q6ZU80 1094 aa13.15□□□□□ -0.31
PRPF4-202ENST00000374199 NAT8LQ8N9F0 302 aa13.15□□□□□ -0.31
PRPF4-202ENST00000374199 LINC01599Q8WXQ3 324 aa13.15□□□□□ -0.31
PRPF4-202ENST00000374199 PRCCQ92733 491 aaPredicted RBP13.15□□□□□ -0.31
PRPF4-202ENST00000374199 CFAP57Q96MR6 1250 aa13.15□□□□□ -0.31
PRPF4-202ENST00000374199 NPY6RQ99463 290 aa13.15□□□□□ -0.31
PRPF4-202ENST00000374199 TRIM31Q9BZY9 425 aa13.15□□□□□ -0.31
PRPF4-202ENST00000374199 SNX25Q9H3E2 840 aa13.15□□□□□ -0.31
PRPF4-202ENST00000374199 CDC42EP4Q9H3Q1 356 aaKnown RBP13.15□□□□□ -0.31
PRPF4-202ENST00000374199 USP29Q9HBJ7 922 aa13.15□□□□□ -0.31
PRPF4-202ENST00000374199 PCDH18Q9HCL0 1135 aa13.15□□□□□ -0.31
PRPF4-202ENST00000374199 PNPLA8Q9NP80 782 aa13.15□□□□□ -0.31
PRPF4-202ENST00000374199 RNF19AQ9NV58 838 aa13.15□□□□□ -0.31
PRPF4-202ENST00000374199 GREB1Q4ZG55 1949 aa13.14□□□□□ -0.31
PRPF4-202ENST00000374199 RNF8O76064 485 aa13.14□□□□□ -0.31
PRPF4-202ENST00000374199 MYZAPP0CAP1 466 aa13.14□□□□□ -0.31
PRPF4-202ENST00000374199 L1CAMP32004 1257 aa13.14□□□□□ -0.31
PRPF4-202ENST00000374199 MAP2K2P36507 400 aa13.14□□□□□ -0.31
PRPF4-202ENST00000374199 MATKP42679 507 aa13.14□□□□□ -0.31
PRPF4-202ENST00000374199 PRMT2P55345 433 aa13.14□□□□□ -0.31
PRPF4-202ENST00000374199 SCAPQ12770 1279 aa13.14□□□□□ -0.31
PRPF4-202ENST00000374199 SCUBE3Q8IX30 993 aa13.14□□□□□ -0.31
PRPF4-202ENST00000374199 ZMIZ2Q8NF64 920 aa13.14□□□□□ -0.31
PRPF4-202ENST00000374199 SENP8Q96LD8 212 aa13.14□□□□□ -0.31
PRPF4-202ENST00000374199 SAGE1Q9NXZ1 904 aa13.14□□□□□ -0.31
PRPF4-202ENST00000374199 FETUBQ9UGM5 382 aa13.14□□□□□ -0.31
PRPF4-202ENST00000374199 FYNP06241 537 aa13.14□□□□□ -0.31
PRPF4-202ENST00000374199 OTUD4Q01804 1114 aaKnown RBP13.14□□□□□ -0.31
PRPF4-202ENST00000374199 SLC25A52Q3SY17 297 aa13.14□□□□□ -0.31
PRPF4-202ENST00000374199 CEP85LQ5SZL2 805 aa13.14□□□□□ -0.31
PRPF4-202ENST00000374199 WSCD1Q658N2 575 aa13.14□□□□□ -0.31
PRPF4-202ENST00000374199 ECHDC2Q86YB7 292 aa13.14□□□□□ -0.31
PRPF4-202ENST00000374199 OR2W6PQ8NHA6 318 aa13.14□□□□□ -0.31
PRPF4-202ENST00000374199 ACTL9Q8TC94 416 aa13.14□□□□□ -0.31
PRPF4-202ENST00000374199 CLEC4CQ8WTT0 213 aa13.14□□□□□ -0.31
PRPF4-202ENST00000374199 CENPTQ96BT3 561 aa13.14□□□□□ -0.31
PRPF4-202ENST00000374199 SYNCQ9H7C4 482 aa13.14□□□□□ -0.31
PRPF4-202ENST00000374199 BCLAF3A2AJT9 711 aaKnown RBP13.13□□□□□ -0.31
PRPF4-202ENST00000374199 BEST1O76090 585 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 COL6A1P12109 1028 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 ELNP15502 786 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 PECAM1P16284 738 aaPredicted RBP13.13□□□□□ -0.31
PRPF4-202ENST00000374199 CD52P31358 61 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 AIF1P55008 147 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms