RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 MFSD10Q14728 455 aa13.76□□□□□ -0.21
NCDN-203ENST00000373253 CA9Q16790 459 aa13.76□□□□□ -0.21
NCDN-203ENST00000373253 DCLK2Q8N568 766 aa13.76□□□□□ -0.21
NCDN-203ENST00000373253 CELF6Q96J87 481 aaKnown RBP13.76□□□□□ -0.21
NCDN-203ENST00000373253 MAML3Q96JK9 1138 aa13.76□□□□□ -0.21
NCDN-203ENST00000373253 ZMAT2Q96NC0 199 aaKnown RBP13.76□□□□□ -0.21
NCDN-203ENST00000373253 KNL1Q8NG31 2342 aa13.76□□□□□ -0.21
NCDN-203ENST00000373253 TRAPPC3O43617 180 aa13.75□□□□□ -0.21
NCDN-203ENST00000373253 ALDH3A1P30838 453 aa13.75□□□□□ -0.21
NCDN-203ENST00000373253 NDUFV1P49821 464 aa13.75□□□□□ -0.21
NCDN-203ENST00000373253 SKOR1P84550 965 aa13.75□□□□□ -0.21
NCDN-203ENST00000373253 POU5F1Q01860 360 aaKnown RBP13.75□□□□□ -0.21
NCDN-203ENST00000373253 ATP11CQ8NB49 1132 aa13.75□□□□□ -0.21
NCDN-203ENST00000373253 CD101Q93033 1021 aa13.75□□□□□ -0.21
NCDN-203ENST00000373253 PGBD4Q96DM1 585 aa13.75□□□□□ -0.21
NCDN-203ENST00000373253 ABCF3Q9NUQ8 709 aa13.75□□□□□ -0.21
NCDN-203ENST00000373253 CEP290O15078 2479 aa13.75□□□□□ -0.21
NCDN-203ENST00000373253 KPNA7A9QM74 516 aa13.75□□□□□ -0.21
NCDN-203ENST00000373253 DNALI1O14645 258 aaPredicted RBP13.75□□□□□ -0.21
NCDN-203ENST00000373253 SCAMP3O14828 347 aaKnown RBP13.75□□□□□ -0.21
NCDN-203ENST00000373253 SNAI1O95863 264 aaPredicted RBP13.75□□□□□ -0.21
NCDN-203ENST00000373253 MMP3P08254 477 aa13.75□□□□□ -0.21
NCDN-203ENST00000373253 ANKRD20A3Q5VUR7 823 aa13.75□□□□□ -0.21
NCDN-203ENST00000373253 SLC27A1Q6PCB7 646 aa13.75□□□□□ -0.21
NCDN-203ENST00000373253 ADGRF2Q8IZF7 708 aa13.75□□□□□ -0.21
NCDN-203ENST00000373253 FAM111AQ96PZ2 611 aa13.75□□□□□ -0.21
NCDN-203ENST00000373253 LGMNQ99538 433 aa13.75□□□□□ -0.21
NCDN-203ENST00000373253 CNPY3Q9BT09 278 aa13.75□□□□□ -0.21
NCDN-203ENST00000373253 KLC2Q9H0B6 622 aa13.75□□□□□ -0.21
NCDN-203ENST00000373253 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.75□□□□□ -0.21
NCDN-203ENST00000373253 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.75□□□□□ -0.21
NCDN-203ENST00000373253 SIGLEC16A6NMB1 481 aa13.75□□□□□ -0.21
NCDN-203ENST00000373253 GOLGA8CPA6NN73 597 aa13.75□□□□□ -0.21
NCDN-203ENST00000373253 H0YGN5 161 aa13.75□□□□□ -0.21
NCDN-203ENST00000373253 XPOTO43592 962 aaKnown RBP13.75□□□□□ -0.21
NCDN-203ENST00000373253 FYB2Q5VWT5 728 aa13.75□□□□□ -0.21
NCDN-203ENST00000373253 CCDC62Q6P9F0 684 aa13.75□□□□□ -0.21
NCDN-203ENST00000373253 XYLT1Q86Y38 959 aa13.75□□□□□ -0.21
NCDN-203ENST00000373253 DEFB106AQ8N104 65 aa13.75□□□□□ -0.21
NCDN-203ENST00000373253 TTC13Q8NBP0 860 aa13.75□□□□□ -0.21
NCDN-203ENST00000373253 PGLYRP2Q96PD5 576 aa13.75□□□□□ -0.21
NCDN-203ENST00000373253 XYLT2Q9H1B5 865 aa13.75□□□□□ -0.21
NCDN-203ENST00000373253 PCMTD2Q9NV79 361 aa13.75□□□□□ -0.21
NCDN-203ENST00000373253 NFS1Q9Y697 457 aa13.75□□□□□ -0.21
NCDN-203ENST00000373253 SNX16P57768 344 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 GBE1Q04446 702 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 PTK6Q13882 451 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 STAT4Q14765 748 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 FAM117BQ6P1L5 589 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 C15orf39Q6ZRI6 1047 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 VPS52Q8N1B4 723 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 KCNV2Q8TDN2 545 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 USP6NLQ92738 828 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 SNRNP25Q9BV90 132 aaKnown RBP13.74□□□□□ -0.21
NCDN-203ENST00000373253 SHCBP1LQ9BZQ2 653 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 FAM129AQ9BZQ8 928 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 VPS11Q9H270 941 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 RSAD1Q9HA92 442 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 DDIT4Q9NX09 232 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 FAM47DPA6NHR8 397 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 KBTBD13C9JR72 458 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 SOCS7O14512 581 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 LPXNO60711 386 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 LSM8O95777 96 aaKnown RBP13.74□□□□□ -0.21
NCDN-203ENST00000373253 CPA2P48052 419 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 TAF6P49848 677 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 SCNN1GP51170 649 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 PTK7Q13308 1070 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 SDHAF4Q5VUM1 108 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 VCPIP1Q96JH7 1222 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 PAFAH2Q99487 392 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 NACA2Q9H009 215 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 VTA1Q9NP79 307 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 ACSS2Q9NR19 701 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 WDR35Q9P2L0 1181 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 AP4E1Q9UPM8 1137 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 TRIM33Q9UPN9 1127 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 B4GALT4O60513 344 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 CILPO75339 1184 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 AP1G2O75843 785 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 STK10O94804 968 aaKnown RBP13.74□□□□□ -0.21
NCDN-203ENST00000373253 RPA3P35244 121 aaPredicted RBP13.74□□□□□ -0.21
NCDN-203ENST00000373253 CDKN2BP42772 138 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 ZNF252P-AS1Q0IIN9 211 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 RHOBTB2Q9BYZ6 727 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 ASB7Q9H672 318 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 ETNK1Q9HBU6 452 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 CD248Q9HCU0 757 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 KRT82Q9NSB4 513 aa13.74□□□□□ -0.21
NCDN-203ENST00000373253 C17orf102A2RUQ5 167 aa13.73□□□□□ -0.21
NCDN-203ENST00000373253 CFAP69A5D8W1 941 aa13.73□□□□□ -0.21
NCDN-203ENST00000373253 ZBTB42B2RXF5 422 aa13.73□□□□□ -0.21
NCDN-203ENST00000373253 DFFAO00273 331 aa13.73□□□□□ -0.21
NCDN-203ENST00000373253 CLGNO14967 610 aa13.73□□□□□ -0.21
NCDN-203ENST00000373253 USP17L7P0C7H9 530 aa13.73□□□□□ -0.21
NCDN-203ENST00000373253 TPH1P17752 444 aa13.73□□□□□ -0.21
NCDN-203ENST00000373253 CYP2F1P24903 491 aa13.73□□□□□ -0.21
NCDN-203ENST00000373253 TMPRSS15P98073 1019 aa13.73□□□□□ -0.21
NCDN-203ENST00000373253 CAV1Q03135 178 aa13.73□□□□□ -0.21
NCDN-203ENST00000373253 TAP1Q03518 808 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms