RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 UNCXA6NJT0 531 aa19.57■□□□□ 0.72
USP49-202ENST00000373010 PAPSS1O43252 624 aaPredicted RBP19.57■□□□□ 0.72
USP49-202ENST00000373010 DARSP14868 501 aaKnown RBP19.57■□□□□ 0.72
USP49-202ENST00000373010 SLC6A3Q01959 620 aa19.57■□□□□ 0.72
USP49-202ENST00000373010 BBS9Q3SYG4 887 aa19.57■□□□□ 0.72
USP49-202ENST00000373010 LACTB2Q53H82 288 aaPredicted RBP19.57■□□□□ 0.72
USP49-202ENST00000373010 SYCP2LQ5T4T6 812 aa19.57■□□□□ 0.72
USP49-202ENST00000373010 C9orf57Q5W0N0 161 aa19.57■□□□□ 0.72
USP49-202ENST00000373010 ARHGEF18Q6ZSZ5 1173 aa19.57■□□□□ 0.72
USP49-202ENST00000373010 CNPY4Q8N129 248 aa19.57■□□□□ 0.72
USP49-202ENST00000373010 C7orf31Q8N865 590 aa19.57■□□□□ 0.72
USP49-202ENST00000373010 SLC35F5Q8WV83 523 aa19.57■□□□□ 0.72
USP49-202ENST00000373010 P3H4Q92791 437 aa19.57■□□□□ 0.72
USP49-202ENST00000373010 RNF157Q96PX1 679 aa19.57■□□□□ 0.72
USP49-202ENST00000373010 TGS1Q96RS0 853 aaKnown RBP19.57■□□□□ 0.72
USP49-202ENST00000373010 TRIM6Q9C030 488 aaPredicted RBP19.57■□□□□ 0.72
USP49-202ENST00000373010 KDM4CQ9H3R0 1056 aa19.57■□□□□ 0.72
USP49-202ENST00000373010 TRABDQ9H4I3 376 aa19.57■□□□□ 0.72
USP49-202ENST00000373010 ACTR5Q9H9F9 607 aaPredicted RBP19.57■□□□□ 0.72
USP49-202ENST00000373010 HESX1Q9UBX0 185 aa19.57■□□□□ 0.72
USP49-202ENST00000373010 XPO7Q9UIA9 1087 aaKnown RBP19.57■□□□□ 0.72
USP49-202ENST00000373010 PDGFRBP09619 1106 aa19.56■□□□□ 0.72
USP49-202ENST00000373010 KRT15P19012 456 aa19.56■□□□□ 0.72
USP49-202ENST00000373010 TFE3P19532 575 aaPredicted RBP19.56■□□□□ 0.72
USP49-202ENST00000373010 SCTRP47872 440 aa19.56■□□□□ 0.72
USP49-202ENST00000373010 WDR4P57081 412 aaKnown RBP19.56■□□□□ 0.72
USP49-202ENST00000373010 CA9Q16790 459 aa19.56■□□□□ 0.72
USP49-202ENST00000373010 SPRYD7Q5W111 196 aa19.56■□□□□ 0.72
USP49-202ENST00000373010 APBB1IPQ7Z5R6 666 aaPredicted RBP19.56■□□□□ 0.72
USP49-202ENST00000373010 C4orf33Q8N1A6 199 aa19.56■□□□□ 0.72
USP49-202ENST00000373010 FBXO36Q8NEA4 188 aa19.56■□□□□ 0.72
USP49-202ENST00000373010 TMEM40Q8WWA1 233 aa19.56■□□□□ 0.72
USP49-202ENST00000373010 DNAJB3Q8WWF6 145 aa19.56■□□□□ 0.72
USP49-202ENST00000373010 PAIP2Q9BPZ3 127 aaKnown RBP19.56■□□□□ 0.72
USP49-202ENST00000373010 RABGEF1Q9UJ41 708 aa19.56■□□□□ 0.72
USP49-202ENST00000373010 NRCAMQ92823 1304 aa19.56■□□□□ 0.72
USP49-202ENST00000373010 FAM47DPA6NHR8 397 aa19.56■□□□□ 0.72
USP49-202ENST00000373010 A6NJR5 290 aa19.56■□□□□ 0.72
USP49-202ENST00000373010 H7C0C1 242 aa19.56■□□□□ 0.72
USP49-202ENST00000373010 F2P00734 622 aa19.56■□□□□ 0.72
USP49-202ENST00000373010 OAS1P00973 400 aaKnown RBP19.56■□□□□ 0.72
USP49-202ENST00000373010 IL4RP24394 825 aa19.56■□□□□ 0.72
USP49-202ENST00000373010 ATP5OP48047 213 aa19.56■□□□□ 0.72
USP49-202ENST00000373010 ALKAL1Q6UXT8 129 aa19.56■□□□□ 0.72
USP49-202ENST00000373010 TMEM110Q86TL2 294 aa19.56■□□□□ 0.72
USP49-202ENST00000373010 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.56■□□□□ 0.72
USP49-202ENST00000373010 CLEC4CQ8WTT0 213 aa19.56■□□□□ 0.72
USP49-202ENST00000373010 CPA4Q9UI42 421 aa19.56■□□□□ 0.72
USP49-202ENST00000373010 ZMYND8Q9ULU4 1186 aaPredicted RBP19.56■□□□□ 0.72
USP49-202ENST00000373010 SLC15A5A6NIM6 579 aa19.55■□□□□ 0.72
USP49-202ENST00000373010 A8MXQ7 604 aa19.55■□□□□ 0.72
USP49-202ENST00000373010 DPYSL4O14531 572 aa19.55■□□□□ 0.72
USP49-202ENST00000373010 MAP3K6O95382 1288 aa19.55■□□□□ 0.72
USP49-202ENST00000373010 CCDC130P13994 396 aa19.55■□□□□ 0.72
USP49-202ENST00000373010 ADORA2BP29275 332 aa19.55■□□□□ 0.72
USP49-202ENST00000373010 SDC4P31431 198 aa19.55■□□□□ 0.72
USP49-202ENST00000373010 FOXN2P32314 431 aa19.55■□□□□ 0.72
USP49-202ENST00000373010 ZNF200P98182 395 aaPredicted RBP19.55■□□□□ 0.72
USP49-202ENST00000373010 NR1H3Q13133 447 aa19.55■□□□□ 0.72
USP49-202ENST00000373010 TFDP2Q14188 446 aa19.55■□□□□ 0.72
USP49-202ENST00000373010 SESTD1Q86VW0 696 aa19.55■□□□□ 0.72
USP49-202ENST00000373010 LRRC52Q8N7C0 313 aa19.55■□□□□ 0.72
USP49-202ENST00000373010 LRRN4Q8WUT4 740 aa19.55■□□□□ 0.72
USP49-202ENST00000373010 RNF39Q9H2S5 420 aa19.55■□□□□ 0.72
USP49-202ENST00000373010 CNTN3Q9P232 1028 aa19.55■□□□□ 0.72
USP49-202ENST00000373010 SMIM35A0A1B0GVV1 85 aa19.55■□□□□ 0.72
USP49-202ENST00000373010 A0A1W2PPM1 405 aa19.55■□□□□ 0.72
USP49-202ENST00000373010 FGFR1P11362 822 aa19.55■□□□□ 0.72
USP49-202ENST00000373010 RDXP35241 583 aaKnown RBP19.55■□□□□ 0.72
USP49-202ENST00000373010 FAM47CQ5HY64 1035 aa19.55■□□□□ 0.72
USP49-202ENST00000373010 EFHC2Q5JST6 749 aa19.55■□□□□ 0.72
USP49-202ENST00000373010 OLFML2BQ68BL8 750 aa19.55■□□□□ 0.72
USP49-202ENST00000373010 PPP1R21Q6ZMI0 780 aa19.55■□□□□ 0.72
USP49-202ENST00000373010 C3orf62Q6ZUJ4 267 aa19.55■□□□□ 0.72
USP49-202ENST00000373010 PQLC3Q8N755 202 aa19.55■□□□□ 0.72
USP49-202ENST00000373010 PLD5Q8N7P1 536 aa19.55■□□□□ 0.72
USP49-202ENST00000373010 ATP11CQ8NB49 1132 aa19.55■□□□□ 0.72
USP49-202ENST00000373010 MAGEB18Q96M61 343 aa19.55■□□□□ 0.72
USP49-202ENST00000373010 SNRNP25Q9BV90 132 aaKnown RBP19.55■□□□□ 0.72
USP49-202ENST00000373010 PCDH18Q9HCL0 1135 aa19.55■□□□□ 0.72
USP49-202ENST00000373010 FLRT1Q9NZU1 646 aa19.55■□□□□ 0.72
USP49-202ENST00000373010 GGT7Q9UJ14 662 aa19.55■□□□□ 0.72
USP49-202ENST00000373010 GNEQ9Y223 722 aaKnown RBP19.55■□□□□ 0.72
USP49-202ENST00000373010 PIN4Q9Y237 131 aaKnown RBP19.55■□□□□ 0.72
USP49-202ENST00000373010 USP15Q9Y4E8 981 aaPredicted RBP19.55■□□□□ 0.72
USP49-202ENST00000373010 PDCD11Q14690 1871 aaKnown RBP19.55■□□□□ 0.72
USP49-202ENST00000373010 MBLAC1A4D2B0 266 aaPredicted RBP19.54■□□□□ 0.72
USP49-202ENST00000373010 E7ESA3 106 aa19.54■□□□□ 0.72
USP49-202ENST00000373010 SPTLC1O15269 473 aa19.54■□□□□ 0.72
USP49-202ENST00000373010 LMO2P25791 158 aa19.54■□□□□ 0.72
USP49-202ENST00000373010 MFSD10Q14728 455 aa19.54■□□□□ 0.72
USP49-202ENST00000373010 ZNF618Q5T7W0 954 aa19.54■□□□□ 0.72
USP49-202ENST00000373010 FBF1Q8TES7 1133 aa19.54■□□□□ 0.72
USP49-202ENST00000373010 ABCF3Q9NUQ8 709 aa19.54■□□□□ 0.72
USP49-202ENST00000373010 PSMC3IPQ9P2W1 217 aaPredicted RBP19.54■□□□□ 0.72
USP49-202ENST00000373010 SLC24A2Q9UI40 661 aa19.54■□□□□ 0.72
USP49-202ENST00000373010 HEY1Q9Y5J3 304 aa19.54■□□□□ 0.72
USP49-202ENST00000373010 SETSIPP0DME0 302 aa19.54■□□□□ 0.72
USP49-202ENST00000373010 GHRP10912 638 aa19.54■□□□□ 0.72
USP49-202ENST00000373010 BOLA3Q53S33 107 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms