RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 MED10Q9BTT4 135 aa26.15■■□□□ 1.78
CTSA-203ENST00000372459 CALN1Q9BXU9 219 aa26.15■■□□□ 1.78
CTSA-203ENST00000372459 TSPYL1Q9H0U9 437 aa26.15■■□□□ 1.78
CTSA-203ENST00000372459 STAU2Q9NUL3 570 aaKnown RBP eCLIP26.15■■□□□ 1.78
CTSA-203ENST00000372459 TP73O15350 636 aa26.14■■□□□ 1.77
CTSA-203ENST00000372459 ENDOD1O94919 500 aa26.14■■□□□ 1.77
CTSA-203ENST00000372459 POMCP01189 267 aa26.14■■□□□ 1.77
CTSA-203ENST00000372459 MYZAPP0CAP1 466 aa26.14■■□□□ 1.77
CTSA-203ENST00000372459 RARGP13631 454 aa26.14■■□□□ 1.77
CTSA-203ENST00000372459 VPS41P49754 854 aa26.14■■□□□ 1.77
CTSA-203ENST00000372459 CDH6P55285 790 aa26.14■■□□□ 1.77
CTSA-203ENST00000372459 EIF3BP55884 814 aaKnown RBP26.14■■□□□ 1.77
CTSA-203ENST00000372459 PLCB3Q01970 1234 aa26.14■■□□□ 1.77
CTSA-203ENST00000372459 ZNF844Q08AG5 666 aa26.14■■□□□ 1.77
CTSA-203ENST00000372459 RAB6CQ53S08 254 aa26.14■■□□□ 1.77
CTSA-203ENST00000372459 SCYL2Q6P3W7 929 aa26.14■■□□□ 1.77
CTSA-203ENST00000372459 PIGZQ86VD9 579 aa26.14■■□□□ 1.77
CTSA-203ENST00000372459 SLC35B2Q8TB61 432 aa26.14■■□□□ 1.77
CTSA-203ENST00000372459 TEKT4Q8WW24 435 aa26.14■■□□□ 1.77
CTSA-203ENST00000372459 TBCBQ99426 244 aa26.14■■□□□ 1.77
CTSA-203ENST00000372459 RAB6CQ9H0N0 254 aa26.14■■□□□ 1.77
CTSA-203ENST00000372459 TRPV6Q9H1D0 765 aa26.14■■□□□ 1.77
CTSA-203ENST00000372459 STARD7Q9NQZ5 370 aa26.14■■□□□ 1.77
CTSA-203ENST00000372459 ANAPC5Q9UJX4 755 aa26.14■■□□□ 1.77
CTSA-203ENST00000372459 A0A1W2PQ45 241 aaPredicted RBP26.13■■□□□ 1.77
CTSA-203ENST00000372459 A0A1W2PQY0 241 aa26.13■■□□□ 1.77
CTSA-203ENST00000372459 CLDN5O00501 218 aa26.13■■□□□ 1.77
CTSA-203ENST00000372459 EFHC1Q5JVL4 640 aa26.13■■□□□ 1.77
CTSA-203ENST00000372459 KIAA0319Q5VV43 1072 aa26.13■■□□□ 1.77
CTSA-203ENST00000372459 ECHDC2Q86YB7 292 aa26.13■■□□□ 1.77
CTSA-203ENST00000372459 MAP7D3Q8IWC1 876 aa26.13■■□□□ 1.77
CTSA-203ENST00000372459 SYT15Q9BQS2 421 aa26.13■■□□□ 1.77
CTSA-203ENST00000372459 PAAF1Q9BRP4 392 aa26.13■■□□□ 1.77
CTSA-203ENST00000372459 MAK16Q9BXY0 300 aaKnown RBP26.13■■□□□ 1.77
CTSA-203ENST00000372459 TMBIM4Q9HC24 238 aa26.13■■□□□ 1.77
CTSA-203ENST00000372459 FKTNO75072 461 aa26.13■■□□□ 1.77
CTSA-203ENST00000372459 OTUD4Q01804 1114 aaKnown RBP26.13■■□□□ 1.77
CTSA-203ENST00000372459 PDK2Q15119 407 aa26.13■■□□□ 1.77
CTSA-203ENST00000372459 DENND2CQ68D51 928 aa26.13■■□□□ 1.77
CTSA-203ENST00000372459 PAQR9Q6ZVX9 377 aa26.13■■□□□ 1.77
CTSA-203ENST00000372459 SLC43A3Q8NBI5 491 aa26.13■■□□□ 1.77
CTSA-203ENST00000372459 ACTL9Q8TC94 416 aa26.13■■□□□ 1.77
CTSA-203ENST00000372459 NUDT17P0C025 328 aa26.12■■□□□ 1.77
CTSA-203ENST00000372459 ARSEP51690 589 aa26.12■■□□□ 1.77
CTSA-203ENST00000372459 PRMT2P55345 433 aa26.12■■□□□ 1.77
CTSA-203ENST00000372459 KRT81Q14533 505 aa26.12■■□□□ 1.77
CTSA-203ENST00000372459 CCDC142Q17RM4 750 aa26.12■■□□□ 1.77
CTSA-203ENST00000372459 KCTD13Q8WZ19 329 aa26.12■■□□□ 1.77
CTSA-203ENST00000372459 EPB41L4BQ9H329 900 aa26.12■■□□□ 1.77
CTSA-203ENST00000372459 CRTAC1Q9NQ79 661 aa26.12■■□□□ 1.77
CTSA-203ENST00000372459 CDH9Q9ULB4 789 aa26.12■■□□□ 1.77
CTSA-203ENST00000372459 INPP5FQ9Y2H2 1132 aa26.12■■□□□ 1.77
CTSA-203ENST00000372459 TIMM13Q9Y5L4 95 aaPredicted RBP26.12■■□□□ 1.77
CTSA-203ENST00000372459 HMGB1P1B2RPK0 211 aaPredicted RBP26.11■■□□□ 1.77
CTSA-203ENST00000372459 APOC4-APOC2K7ER74 178 aa26.11■■□□□ 1.77
CTSA-203ENST00000372459 APOC2P02655 101 aa26.11■■□□□ 1.77
CTSA-203ENST00000372459 FAM200BP0CF97 657 aa26.11■■□□□ 1.77
CTSA-203ENST00000372459 ODC1P11926 461 aa26.11■■□□□ 1.77
CTSA-203ENST00000372459 PAX3P23760 479 aa26.11■■□□□ 1.77
CTSA-203ENST00000372459 GRK4P32298 578 aa26.11■■□□□ 1.77
CTSA-203ENST00000372459 VEGFBP49765 207 aa26.11■■□□□ 1.77
CTSA-203ENST00000372459 IFFO1Q0D2I5 559 aa26.11■■□□□ 1.77
CTSA-203ENST00000372459 TUSC3Q13454 348 aa26.11■■□□□ 1.77
CTSA-203ENST00000372459 TIGD5Q53EQ6 642 aa26.11■■□□□ 1.77
CTSA-203ENST00000372459 IZUMO3Q5VZ72 239 aa26.11■■□□□ 1.77
CTSA-203ENST00000372459 ZNF598Q86UK7 904 aaKnown RBP26.11■■□□□ 1.77
CTSA-203ENST00000372459 ATP6V1G3Q96LB4 118 aa26.11■■□□□ 1.77
CTSA-203ENST00000372459 UROC1Q96N76 676 aa26.11■■□□□ 1.77
CTSA-203ENST00000372459 TDRD15B5MCY1 1934 aaKnown RBP26.11■■□□□ 1.77
CTSA-203ENST00000372459 HTTP42858 3142 aa26.11■■□□□ 1.77
CTSA-203ENST00000372459 SHOX2O60902 331 aaPredicted RBP26.11■■□□□ 1.77
CTSA-203ENST00000372459 B3GAT3O94766 335 aa26.11■■□□□ 1.77
CTSA-203ENST00000372459 HDAC4P56524 1084 aa26.11■■□□□ 1.77
CTSA-203ENST00000372459 DPYSL3Q14195 570 aa26.11■■□□□ 1.77
CTSA-203ENST00000372459 CLEC20AQ6ZU45 233 aa26.11■■□□□ 1.77
CTSA-203ENST00000372459 CCDC25Q86WR0 208 aa26.11■■□□□ 1.77
CTSA-203ENST00000372459 SPATA18Q8TC71 538 aa26.11■■□□□ 1.77
CTSA-203ENST00000372459 CENPIQ92674 756 aaPredicted RBP26.11■■□□□ 1.77
CTSA-203ENST00000372459 TMEM121Q9BTD3 319 aa26.11■■□□□ 1.77
CTSA-203ENST00000372459 C11orf84Q9BUA3 381 aaPredicted RBP26.11■■□□□ 1.77
CTSA-203ENST00000372459 DDX23Q9BUQ8 820 aaKnown RBP26.11■■□□□ 1.77
CTSA-203ENST00000372459 SEMA4AQ9H3S1 761 aa26.11■■□□□ 1.77
CTSA-203ENST00000372459 RGS18Q9NS28 235 aa26.11■■□□□ 1.77
CTSA-203ENST00000372459 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP26.11■■□□□ 1.772e-6■■□□□ 12.2
CTSA-203ENST00000372459 MDM4O15151 490 aa26.1■■□□□ 1.77
CTSA-203ENST00000372459 PCSK1P29120 753 aa26.1■■□□□ 1.77
CTSA-203ENST00000372459 ADIGQ0VDE8 80 aa26.1■■□□□ 1.77
CTSA-203ENST00000372459 TFDP2Q14188 446 aa26.1■■□□□ 1.77
CTSA-203ENST00000372459 KCTD16Q68DU8 428 aa26.1■■□□□ 1.77
CTSA-203ENST00000372459 TRAF7Q6Q0C0 670 aa26.1■■□□□ 1.77
CTSA-203ENST00000372459 LRRC31Q6UY01 552 aa26.1■■□□□ 1.77
CTSA-203ENST00000372459 LRRC4Q9HBW1 653 aa26.1■■□□□ 1.77
CTSA-203ENST00000372459 SAE1Q9UBE0 346 aaPredicted RBP26.1■■□□□ 1.77
CTSA-203ENST00000372459 SGK1O00141 431 aa26.09■■□□□ 1.77
CTSA-203ENST00000372459 BEST1O76090 585 aa26.09■■□□□ 1.77
CTSA-203ENST00000372459 P3H1Q32P28 736 aa26.09■■□□□ 1.77
CTSA-203ENST00000372459 TRMT10CQ7L0Y3 403 aaKnown RBP26.09■■□□□ 1.77
CTSA-203ENST00000372459 PRUNE1Q86TP1 453 aa26.09■■□□□ 1.77
CTSA-203ENST00000372459 METTL23Q86XA0 190 aa26.09■■□□□ 1.77
CTSA-203ENST00000372459 VSIG1Q86XK7 387 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms