RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 MSCO60682 206 aa13.79□□□□□ -0.2
RAPGEF1-201ENST00000372189 MBL2P11226 248 aaPredicted RBP13.79□□□□□ -0.2
RAPGEF1-201ENST00000372189 VHLP40337 213 aa13.79□□□□□ -0.2
RAPGEF1-201ENST00000372189 ELAVL2Q12926 359 aaKnown RBP13.79□□□□□ -0.2
RAPGEF1-201ENST00000372189 EIF2B5Q13144 721 aaKnown RBP13.79□□□□□ -0.2
RAPGEF1-201ENST00000372189 CBWD2Q8IUF1 395 aa13.79□□□□□ -0.2
RAPGEF1-201ENST00000372189 RNF217Q8TC41 542 aa13.79□□□□□ -0.2
RAPGEF1-201ENST00000372189 SYN2Q92777 582 aaPredicted RBP13.79□□□□□ -0.2
RAPGEF1-201ENST00000372189 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.79□□□□□ -0.2
RAPGEF1-201ENST00000372189 DOLKQ9UPQ8 538 aa13.79□□□□□ -0.2
RAPGEF1-201ENST00000372189 AURKCQ9UQB9 309 aa13.79□□□□□ -0.2
RAPGEF1-201ENST00000372189 C16orf96A6NNT2 1141 aa13.79□□□□□ -0.2
RAPGEF1-201ENST00000372189 IDH3BO43837 385 aa13.79□□□□□ -0.2
RAPGEF1-201ENST00000372189 CABYRO75952 493 aa13.79□□□□□ -0.2
RAPGEF1-201ENST00000372189 LCA5LO95447 670 aa13.79□□□□□ -0.2
RAPGEF1-201ENST00000372189 CDH18Q13634 790 aa13.79□□□□□ -0.2
RAPGEF1-201ENST00000372189 ITIH4Q14624 930 aa13.79□□□□□ -0.2
RAPGEF1-201ENST00000372189 PKN1Q16512 942 aa13.79□□□□□ -0.2
RAPGEF1-201ENST00000372189 HASPINQ8TF76 798 aa13.79□□□□□ -0.2
RAPGEF1-201ENST00000372189 AGAP3Q96P47 875 aa13.79□□□□□ -0.2
RAPGEF1-201ENST00000372189 TRIM45Q9H8W5 580 aaPredicted RBP13.79□□□□□ -0.2
RAPGEF1-201ENST00000372189 SMARCAL1Q9NZC9 954 aa13.79□□□□□ -0.2
RAPGEF1-201ENST00000372189 KIAA1257Q9ULG3 409 aa13.79□□□□□ -0.2
RAPGEF1-201ENST00000372189 RPH3AQ9Y2J0 694 aaPredicted RBP13.79□□□□□ -0.2
RAPGEF1-201ENST00000372189 ATP13A5Q4VNC0 1218 aa13.79□□□□□ -0.2
RAPGEF1-201ENST00000372189 WDR49Q8IV35 697 aa13.79□□□□□ -0.2
RAPGEF1-201ENST00000372189 SUN5Q8TC36 379 aa13.79□□□□□ -0.2
RAPGEF1-201ENST00000372189 ERP44Q9BS26 406 aa13.79□□□□□ -0.2
RAPGEF1-201ENST00000372189 RNPEPQ9H4A4 650 aa13.79□□□□□ -0.2
RAPGEF1-201ENST00000372189 ZFATQ9P243 1243 aa13.79□□□□□ -0.2
RAPGEF1-201ENST00000372189 ZNF212Q9UDV6 495 aa13.79□□□□□ -0.2
RAPGEF1-201ENST00000372189 ACADSP16219 412 aa13.79□□□□□ -0.2
RAPGEF1-201ENST00000372189 PDK1Q15118 436 aa13.79□□□□□ -0.2
RAPGEF1-201ENST00000372189 RUNDC3AQ59EK9 446 aa13.79□□□□□ -0.2
RAPGEF1-201ENST00000372189 DDIASQ8IXT1 998 aa13.79□□□□□ -0.2
RAPGEF1-201ENST00000372189 C4orf33Q8N1A6 199 aa13.79□□□□□ -0.2
RAPGEF1-201ENST00000372189 CERS5Q8N5B7 392 aa13.79□□□□□ -0.2
RAPGEF1-201ENST00000372189 ANKS1AQ92625 1134 aa13.79□□□□□ -0.2
RAPGEF1-201ENST00000372189 SLC15A5A6NIM6 579 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 VDRP11473 427 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 ABCE1P61221 599 aaKnown RBP13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 TMC7Q7Z402 723 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 ACOT1Q86TX2 421 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 NSL1Q96IY1 281 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 A1CFQ9NQ94 594 aaKnown RBP13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 PDP2Q9P2J9 529 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 ANGPT2O15123 496 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 SEC24DO94855 1032 aaPredicted RBP13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 KIRREL3Q8IZU9 778 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 ZNF555Q8NEP9 628 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 CNPY3Q9BT09 278 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 THTPAQ9BU02 230 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 PDCD10Q9BUL8 212 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 CD248Q9HCU0 757 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 SEPT3Q9UH03 358 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 CASTOR2A6NHX0 329 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 BAIAP3O94812 1187 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 TMEM253P0C7T8 217 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 HOXC8P31273 242 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 AKT1P31749 480 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 ZNF200P98182 395 aaPredicted RBP13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 CRYMQ14894 314 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 PTPAQ15257 358 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 SMAD1Q15797 465 aaKnown RBP13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 RBBP7Q16576 425 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 KYNUQ16719 465 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 LRRC8BQ6P9F7 803 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 FEZF2Q8TBJ5 459 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 PNKPQ96T60 521 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 SYNDIG1Q9H7V2 258 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 ITM2BQ9Y287 266 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 TRPV2Q9Y5S1 764 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 SPAG6O75602 509 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 SESN2P58004 480 aaPredicted RBP13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 ZNF177Q13360 481 aaPredicted RBP13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 LRRC36Q1X8D7 754 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 EPC2Q52LR7 807 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 GJB7Q6PEY0 223 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 SZRD1Q7Z422 152 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 C1orf131Q8NDD1 294 aaKnown RBP13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 SLC5A5Q92911 643 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 TINF2Q9BSI4 451 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 MRPL1Q9BYD6 325 aaKnown RBP13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 WDCPQ9H6R7 721 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 RSAD1Q9HA92 442 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 SNTG2Q9NY99 539 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 TRIM64A6NGJ6 449 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 TRIM64BA6NI03 449 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 GHRP10912 638 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 ACO1P21399 889 aaKnown RBP13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 AXLP30530 894 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 HSD17B3P37058 310 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 TWF1Q12792 350 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 FOXD4Q12950 439 aaPredicted RBP13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 TBCCQ15814 346 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 RNF135Q8IUD6 432 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 UNC45BQ8IWX7 931 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 KRT35Q92764 455 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 ARHGEF26Q96DR7 871 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms