RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 FAM13CQ8NE31 585 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 ZFAND2BQ8WV99 257 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 BICD1Q96G01 975 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 TARS2Q9BW92 718 aaKnown RBP12□□□□□ -0.49
TSPAN1-201ENST00000372003 FTHL17Q9BXU8 183 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 PHACTR1Q9C0D0 580 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 CXXC1Q9P0U4 656 aaPredicted RBP12□□□□□ -0.49
TSPAN1-201ENST00000372003 TBX20Q9UMR3 447 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 PHTF1Q9UMS5 762 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 ABHD14A-ACY1A0A1B0GW23 586 aa11.99□□□□□ -0.49
TSPAN1-201ENST00000372003 RASA4BC9J798 803 aa11.99□□□□□ -0.49
TSPAN1-201ENST00000372003 C2CD2LO14523 706 aa11.99□□□□□ -0.49
TSPAN1-201ENST00000372003 CLDN3O15551 220 aa11.99□□□□□ -0.49
TSPAN1-201ENST00000372003 RASA4O43374 803 aa11.99□□□□□ -0.49
TSPAN1-201ENST00000372003 PSTPIP1O43586 416 aa11.99□□□□□ -0.49
TSPAN1-201ENST00000372003 ZWINTO95229 277 aa11.99□□□□□ -0.49
TSPAN1-201ENST00000372003 DLATP10515 647 aaKnown RBP11.99□□□□□ -0.49
TSPAN1-201ENST00000372003 CYP11B1P15538 503 aa11.99□□□□□ -0.49
TSPAN1-201ENST00000372003 PTPN4P29074 926 aa11.99□□□□□ -0.49
TSPAN1-201ENST00000372003 HOXA11P31270 313 aaPredicted RBP11.99□□□□□ -0.49
TSPAN1-201ENST00000372003 GTF2H1P32780 548 aa11.99□□□□□ -0.49
TSPAN1-201ENST00000372003 ADCY8P40145 1251 aa11.99□□□□□ -0.49
TSPAN1-201ENST00000372003 MXI1P50539 228 aa11.99□□□□□ -0.49
TSPAN1-201ENST00000372003 WDR4P57081 412 aaKnown RBP11.99□□□□□ -0.49
TSPAN1-201ENST00000372003 GTF2BQ00403 316 aa11.99□□□□□ -0.49
TSPAN1-201ENST00000372003 PPP3CAQ08209 521 aa11.99□□□□□ -0.49
TSPAN1-201ENST00000372003 RBBP5Q15291 538 aaKnown RBP11.99□□□□□ -0.49
TSPAN1-201ENST00000372003 ZNF677Q86XU0 584 aa11.99□□□□□ -0.49
TSPAN1-201ENST00000372003 MFN1Q8IWA4 741 aa11.99□□□□□ -0.49
TSPAN1-201ENST00000372003 SRRM1Q8IYB3 904 aaKnown RBP11.99□□□□□ -0.49
TSPAN1-201ENST00000372003 CYP4X1Q8N118 509 aa11.99□□□□□ -0.49
TSPAN1-201ENST00000372003 RBBP8NLQ8NC74 664 aaPredicted RBP11.99□□□□□ -0.49
TSPAN1-201ENST00000372003 C1orf54Q8WWF1 131 aa11.99□□□□□ -0.49
TSPAN1-201ENST00000372003 LINC01599Q8WXQ3 324 aa11.99□□□□□ -0.49
TSPAN1-201ENST00000372003 ERP27Q96DN0 273 aa11.99□□□□□ -0.49
TSPAN1-201ENST00000372003 IKZF4Q9H2S9 585 aa11.99□□□□□ -0.49
TSPAN1-201ENST00000372003 VCXQ9H320 206 aa11.99□□□□□ -0.49
TSPAN1-201ENST00000372003 KIF9Q9HAQ2 790 aa11.99□□□□□ -0.49
TSPAN1-201ENST00000372003 STOML1Q9UBI4 398 aa11.99□□□□□ -0.49
TSPAN1-201ENST00000372003 SLC24A2Q9UI40 661 aa11.99□□□□□ -0.49
TSPAN1-201ENST00000372003 CHKBQ9Y259 395 aa11.99□□□□□ -0.49
TSPAN1-201ENST00000372003 TNRC18O15417 2968 aaPredicted RBP11.99□□□□□ -0.49
TSPAN1-201ENST00000372003 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.98□□□□□ -0.49
TSPAN1-201ENST00000372003 ZC3H11AO75152 810 aaKnown RBP eCLIP11.98□□□□□ -0.49
TSPAN1-201ENST00000372003 UPP2O95045 317 aa11.98□□□□□ -0.49
TSPAN1-201ENST00000372003 RAD23BP54727 409 aa11.98□□□□□ -0.49
TSPAN1-201ENST00000372003 KLC1Q07866 573 aa11.98□□□□□ -0.49
TSPAN1-201ENST00000372003 DSC3Q14574 896 aa11.98□□□□□ -0.49
TSPAN1-201ENST00000372003 PCBP1Q15365 356 aaKnown RBP eCLIP11.98□□□□□ -0.49
TSPAN1-201ENST00000372003 FAM187BQ17R55 369 aa11.98□□□□□ -0.49
TSPAN1-201ENST00000372003 ATF7IP2Q5U623 682 aa11.98□□□□□ -0.49
TSPAN1-201ENST00000372003 AP1ARQ63HQ0 302 aa11.98□□□□□ -0.49
TSPAN1-201ENST00000372003 ANO7Q6IWH7 933 aa11.98□□□□□ -0.49
TSPAN1-201ENST00000372003 IRGCQ6NXR0 463 aa11.98□□□□□ -0.49
TSPAN1-201ENST00000372003 FAM117BQ6P1L5 589 aa11.98□□□□□ -0.49
TSPAN1-201ENST00000372003 NOTUMQ6P988 496 aa11.98□□□□□ -0.49
TSPAN1-201ENST00000372003 DRICH1Q6PGQ1 229 aaPredicted RBP11.98□□□□□ -0.49
TSPAN1-201ENST00000372003 TMCO2Q7Z6W1 182 aaPredicted RBP11.98□□□□□ -0.49
TSPAN1-201ENST00000372003 RNF169Q8NCN4 708 aa11.98□□□□□ -0.49
TSPAN1-201ENST00000372003 C10orf82Q8WW14 230 aa11.98□□□□□ -0.49
TSPAN1-201ENST00000372003 HERVK_113Q902F9 699 aa11.98□□□□□ -0.49
TSPAN1-201ENST00000372003 SLC7A6OSQ96CW6 309 aaPredicted RBP11.98□□□□□ -0.49
TSPAN1-201ENST00000372003 TCHPQ9BT92 498 aa11.98□□□□□ -0.49
TSPAN1-201ENST00000372003 MRPL4Q9BYD3 311 aaKnown RBP11.98□□□□□ -0.49
TSPAN1-201ENST00000372003 CYLDQ9NQC7 956 aa11.98□□□□□ -0.49
TSPAN1-201ENST00000372003 CHST12Q9NRB3 414 aa11.98□□□□□ -0.49
TSPAN1-201ENST00000372003 RGS18Q9NS28 235 aa11.98□□□□□ -0.49
TSPAN1-201ENST00000372003 CHST7Q9NS84 486 aa11.98□□□□□ -0.49
TSPAN1-201ENST00000372003 KLHL33A6NCF5 533 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 BAIAP3O94812 1187 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 GSTA2P09210 222 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 HARSP12081 509 aaKnown RBP11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 PECAM1P16284 738 aaPredicted RBP11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 AXLP30530 894 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 CETN2P41208 172 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 MAGEA4P43358 317 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 LIG4P49917 911 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 WDR5P61964 334 aaKnown RBP11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 DEFB103AP81534 67 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 SF3A3Q12874 501 aaKnown RBP eCLIP11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 KLF1Q13351 362 aaPredicted RBP11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 CCDC142Q17RM4 750 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 CLEC16AQ2KHT3 1053 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 C1orf220Q5T0J3 134 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 IZUMO3Q5VZ72 239 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 EEF1DP3Q658K8 133 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 EP400NLQ6ZTU2 488 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 ZBTB33Q86T24 672 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 USP37Q86T82 979 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 LONP2Q86WA8 852 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 TMC2Q8TDI7 906 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 LRRC8CQ8TDW0 803 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 DDX1Q92499 740 aaKnown RBP11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 ZBTB45Q96K62 511 aaPredicted RBP11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 NUDCD1Q96RS6 583 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 SMC6Q96SB8 1091 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 POP1Q99575 1024 aaKnown RBP11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 ACO2Q99798 780 aaKnown RBP11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 TBC1D10AQ9BXI6 508 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 EIF2AQ9BY44 585 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms