RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 UGT1A8Q9HAW9 530 aa12.21□□□□□ -0.46
PTPN1-201ENST00000371621 DNPEPQ9ULA0 475 aa12.21□□□□□ -0.46
PTPN1-201ENST00000371621 ADGRA3Q8IWK6 1321 aa12.21□□□□□ -0.46
PTPN1-201ENST00000371621 IGSF9BQ9UPX0 1349 aa12.21□□□□□ -0.46
PTPN1-201ENST00000371621 CCRL2O00421 344 aa12.21□□□□□ -0.46
PTPN1-201ENST00000371621 IDH3BO43837 385 aa12.21□□□□□ -0.46
PTPN1-201ENST00000371621 TCP10Q12799 353 aa12.21□□□□□ -0.46
PTPN1-201ENST00000371621 PTK2BQ14289 1009 aa12.21□□□□□ -0.46
PTPN1-201ENST00000371621 ZNF354CQ86Y25 554 aa12.21□□□□□ -0.46
PTPN1-201ENST00000371621 BPIFB6Q8NFQ5 453 aa12.21□□□□□ -0.46
PTPN1-201ENST00000371621 ETNPPLQ8TBG4 499 aa12.21□□□□□ -0.46
PTPN1-201ENST00000371621 SKA1Q96BD8 255 aa12.21□□□□□ -0.46
PTPN1-201ENST00000371621 PANX3Q96QZ0 392 aa12.21□□□□□ -0.46
PTPN1-201ENST00000371621 CCDC28BQ9BUN5 200 aa12.21□□□□□ -0.46
PTPN1-201ENST00000371621 CHID1Q9BWS9 393 aa12.21□□□□□ -0.46
PTPN1-201ENST00000371621 ZNF395Q9H8N7 513 aaPredicted RBP12.21□□□□□ -0.46
PTPN1-201ENST00000371621 BLOC1S4Q9NUP1 217 aa12.21□□□□□ -0.46
PTPN1-201ENST00000371621 ZNF219Q9P2Y4 722 aaPredicted RBP12.21□□□□□ -0.46
PTPN1-201ENST00000371621 UVRAGQ9P2Y5 699 aa12.21□□□□□ -0.46
PTPN1-201ENST00000371621 STK39Q9UEW8 545 aa12.21□□□□□ -0.46
PTPN1-201ENST00000371621 USP32Q8NFA0 1604 aa12.2□□□□□ -0.46
PTPN1-201ENST00000371621 TM9SF1O15321 606 aa12.2□□□□□ -0.46
PTPN1-201ENST00000371621 PHGDHO43175 533 aaKnown RBP12.2□□□□□ -0.46
PTPN1-201ENST00000371621 SNX2O60749 519 aa12.2□□□□□ -0.46
PTPN1-201ENST00000371621 INPP1P49441 399 aa12.2□□□□□ -0.46
PTPN1-201ENST00000371621 POU5F1BQ06416 359 aa12.2□□□□□ -0.46
PTPN1-201ENST00000371621 GABPAQ06546 454 aa12.2□□□□□ -0.46
PTPN1-201ENST00000371621 FOXB2Q5VYV0 432 aa12.2□□□□□ -0.46
PTPN1-201ENST00000371621 SLC30A10Q6XR72 485 aa12.2□□□□□ -0.46
PTPN1-201ENST00000371621 SCARA5Q6ZMJ2 495 aa12.2□□□□□ -0.46
PTPN1-201ENST00000371621 CLEC10AQ8IUN9 316 aa12.2□□□□□ -0.46
PTPN1-201ENST00000371621 PCDH20Q8N6Y1 951 aaKnown RBP12.2□□□□□ -0.46
PTPN1-201ENST00000371621 CIB1Q99828 191 aa12.2□□□□□ -0.46
PTPN1-201ENST00000371621 TOR3AQ9H497 397 aa12.2□□□□□ -0.46
PTPN1-201ENST00000371621 DHX35Q9H5Z1 703 aaKnown RBP12.2□□□□□ -0.46
PTPN1-201ENST00000371621 AFG3L2Q9Y4W6 797 aa12.2□□□□□ -0.46
PTPN1-201ENST00000371621 CYB561D2O14569 222 aa12.2□□□□□ -0.46
PTPN1-201ENST00000371621 RBP3P10745 1247 aa12.2□□□□□ -0.46
PTPN1-201ENST00000371621 IL2RBP14784 551 aa12.2□□□□□ -0.46
PTPN1-201ENST00000371621 DDX5P17844 614 aaKnown RBP12.2□□□□□ -0.46
PTPN1-201ENST00000371621 IST1P53990 364 aa12.2□□□□□ -0.46
PTPN1-201ENST00000371621 PEX3P56589 373 aa12.2□□□□□ -0.46
PTPN1-201ENST00000371621 ACTR3P61158 418 aa12.2□□□□□ -0.46
PTPN1-201ENST00000371621 NFX1Q12986 1120 aaKnown RBP12.2□□□□□ -0.46
PTPN1-201ENST00000371621 DGCR6Q14129 220 aa12.2□□□□□ -0.46
PTPN1-201ENST00000371621 GET4Q7L5D6 327 aaPredicted RBP12.2□□□□□ -0.46
PTPN1-201ENST00000371621 GATAD2AQ86YP4 633 aa12.2□□□□□ -0.46
PTPN1-201ENST00000371621 KAT5Q92993 513 aa12.2□□□□□ -0.46
PTPN1-201ENST00000371621 DCLK3Q9C098 648 aa12.2□□□□□ -0.46
PTPN1-201ENST00000371621 IKZF4Q9H2S9 585 aa12.2□□□□□ -0.46
PTPN1-201ENST00000371621 RPAP3Q9H6T3 665 aaPredicted RBP12.2□□□□□ -0.46
PTPN1-201ENST00000371621 ZNF510Q9Y2H8 683 aa12.2□□□□□ -0.46
PTPN1-201ENST00000371621 ZMYM2Q9UBW7 1377 aa12.2□□□□□ -0.46
PTPN1-201ENST00000371621 MYH7BA7E2Y1 1941 aa12.2□□□□□ -0.46
PTPN1-201ENST00000371621 TESPA1A2RU30 521 aaPredicted RBP12.2□□□□□ -0.46
PTPN1-201ENST00000371621 A8MU76 341 aa12.2□□□□□ -0.46
PTPN1-201ENST00000371621 RIMBP2O15034 1052 aa12.2□□□□□ -0.46
PTPN1-201ENST00000371621 SIN3BO75182 1162 aa12.2□□□□□ -0.46
PTPN1-201ENST00000371621 LYPLA1O75608 230 aaPredicted RBP12.2□□□□□ -0.46
PTPN1-201ENST00000371621 CDK4P11802 303 aa12.2□□□□□ -0.46
PTPN1-201ENST00000371621 NME5P56597 212 aa12.2□□□□□ -0.46
PTPN1-201ENST00000371621 TTLL12Q14166 644 aaPredicted RBP12.2□□□□□ -0.46
PTPN1-201ENST00000371621 XKR9Q5GH70 373 aa12.2□□□□□ -0.46
PTPN1-201ENST00000371621 SLC4A11Q8NBS3 891 aa12.2□□□□□ -0.46
PTPN1-201ENST00000371621 MARK4Q96L34 752 aa12.2□□□□□ -0.46
PTPN1-201ENST00000371621 FGFBP2Q9BYJ0 223 aa12.2□□□□□ -0.46
PTPN1-201ENST00000371621 EHD1Q9H4M9 534 aa12.2□□□□□ -0.46
PTPN1-201ENST00000371621 PIF1Q9H611 641 aa12.2□□□□□ -0.46
PTPN1-201ENST00000371621 NGRNQ9NPE2 291 aaKnown RBP12.2□□□□□ -0.46
PTPN1-201ENST00000371621 TRPV5Q9NQA5 729 aa12.2□□□□□ -0.46
PTPN1-201ENST00000371621 KRT7P08729 469 aa12.19□□□□□ -0.46
PTPN1-201ENST00000371621 ZNF23P17027 643 aa12.19□□□□□ -0.46
PTPN1-201ENST00000371621 SLC1A1P43005 524 aa12.19□□□□□ -0.46
PTPN1-201ENST00000371621 NKX2-5P52952 324 aaPredicted RBP12.19□□□□□ -0.46
PTPN1-201ENST00000371621 WASHC5Q12768 1159 aa12.19□□□□□ -0.46
PTPN1-201ENST00000371621 COG2Q14746 738 aa12.19□□□□□ -0.46
PTPN1-201ENST00000371621 PRR23BQ6ZRT6 265 aa12.19□□□□□ -0.46
PTPN1-201ENST00000371621 RTKN2Q8IZC4 609 aa12.19□□□□□ -0.46
PTPN1-201ENST00000371621 RASGEF1CQ8N431 466 aa12.19□□□□□ -0.46
PTPN1-201ENST00000371621 RYBPQ8N488 228 aaPredicted RBP12.19□□□□□ -0.46
PTPN1-201ENST00000371621 POC5Q8NA72 575 aa12.19□□□□□ -0.46
PTPN1-201ENST00000371621 KYQ8NBH2 561 aa12.19□□□□□ -0.46
PTPN1-201ENST00000371621 FAM156AQ8NDB6 213 aa12.19□□□□□ -0.46
PTPN1-201ENST00000371621 RIN3Q8TB24 985 aa12.19□□□□□ -0.46
PTPN1-201ENST00000371621 PPP1R1BQ9UD71 204 aaPredicted RBP12.19□□□□□ -0.46
PTPN1-201ENST00000371621 SLC24A2Q9UI40 661 aa12.19□□□□□ -0.46
PTPN1-201ENST00000371621 ANKRD12Q6UB98 2062 aa12.19□□□□□ -0.46
PTPN1-201ENST00000371621 F8W8V4 182 aa12.19□□□□□ -0.46
PTPN1-201ENST00000371621 K7EPI3 171 aa12.19□□□□□ -0.46
PTPN1-201ENST00000371621 GAP43P17677 238 aa12.19□□□□□ -0.46
PTPN1-201ENST00000371621 ELK3P41970 407 aa12.19□□□□□ -0.46
PTPN1-201ENST00000371621 MYLK3Q32MK0 819 aa12.19□□□□□ -0.46
PTPN1-201ENST00000371621 ATP13A4Q4VNC1 1196 aa12.19□□□□□ -0.46
PTPN1-201ENST00000371621 POTEHQ6S545 545 aa12.19□□□□□ -0.46
PTPN1-201ENST00000371621 XXYLT1Q8NBI6 393 aa12.19□□□□□ -0.46
PTPN1-201ENST00000371621 DHX38Q92620 1227 aaKnown RBP12.19□□□□□ -0.46
PTPN1-201ENST00000371621 SGF29Q96ES7 293 aa12.19□□□□□ -0.46
PTPN1-201ENST00000371621 DNAI2Q9GZS0 605 aa12.19□□□□□ -0.46
PTPN1-201ENST00000371621 NXF1Q9UBU9 619 aaKnown RBP12.19□□□□□ -0.46
PTPN1-201ENST00000371621 ZBTB1Q9Y2K1 713 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms