RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 GRB14Q14449 540 aa30.21■■■□□ 2.43
SSBP3-204ENST00000371320 BOLA3Q53S33 107 aa30.21■■■□□ 2.43
SSBP3-204ENST00000371320 C1orf228Q6PIY5 440 aa30.21■■■□□ 2.43
SSBP3-204ENST00000371320 PALM2Q8IXS6 379 aa30.21■■■□□ 2.43
SSBP3-204ENST00000371320 TINF2Q9BSI4 451 aa30.21■■■□□ 2.43
SSBP3-204ENST00000371320 EIF2AQ9BY44 585 aaKnown RBP30.21■■■□□ 2.43
SSBP3-204ENST00000371320 NGRNQ9NPE2 291 aaKnown RBP30.21■■■□□ 2.43
SSBP3-204ENST00000371320 HESX1Q9UBX0 185 aa30.21■■■□□ 2.43
SSBP3-204ENST00000371320 TUBGCP4Q9UGJ1 667 aa30.21■■■□□ 2.43
SSBP3-204ENST00000371320 H7C0C1 242 aa30.21■■■□□ 2.43
SSBP3-204ENST00000371320 DPYSL4O14531 572 aa30.21■■■□□ 2.43
SSBP3-204ENST00000371320 SETSIPP0DME0 302 aa30.21■■■□□ 2.43
SSBP3-204ENST00000371320 ATP5OP48047 213 aa30.21■■■□□ 2.43
SSBP3-204ENST00000371320 NRLP54845 237 aa30.21■■■□□ 2.43
SSBP3-204ENST00000371320 SLC6A3Q01959 620 aa30.21■■■□□ 2.43
SSBP3-204ENST00000371320 RNASELQ05823 741 aaKnown RBP30.21■■■□□ 2.43
SSBP3-204ENST00000371320 XRCC4Q13426 336 aa30.21■■■□□ 2.43
SSBP3-204ENST00000371320 PDK2Q15119 407 aa30.21■■■□□ 2.43
SSBP3-204ENST00000371320 FAM133BQ5BKY9 247 aaKnown RBP30.21■■■□□ 2.43
SSBP3-204ENST00000371320 IQSEC1Q6DN90 963 aa30.21■■■□□ 2.43
SSBP3-204ENST00000371320 BEST2Q8NFU1 509 aa30.21■■■□□ 2.43
SSBP3-204ENST00000371320 PLCD4Q9BRC7 762 aa30.21■■■□□ 2.43
SSBP3-204ENST00000371320 WDR83Q9BRX9 315 aaKnown RBP30.21■■■□□ 2.43
SSBP3-204ENST00000371320 SLC4A5Q9BY07 1137 aa30.21■■■□□ 2.43
SSBP3-204ENST00000371320 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP30.21■■■□□ 2.433e-7■■■■□ 26.1
SSBP3-204ENST00000371320 SDC4P31431 198 aa30.2■■■□□ 2.43
SSBP3-204ENST00000371320 SPARCL1Q14515 664 aa30.2■■■□□ 2.43
SSBP3-204ENST00000371320 TMEM110Q86TL2 294 aa30.2■■■□□ 2.43
SSBP3-204ENST00000371320 SUGP1Q8IWZ8 645 aaKnown RBP30.2■■■□□ 2.43
SSBP3-204ENST00000371320 MTM1Q13496 603 aa30.19■■■□□ 2.42
SSBP3-204ENST00000371320 EFTUD2Q15029 972 aaKnown RBP eCLIP30.19■■■□□ 2.424e-7■■■■■ 32.3
SSBP3-204ENST00000371320 MTFR1Q15390 333 aa30.19■■■□□ 2.42
SSBP3-204ENST00000371320 KLHL38Q2WGJ6 581 aa30.19■■■□□ 2.42
SSBP3-204ENST00000371320 ANKRD23Q86SG2 305 aa30.19■■■□□ 2.42
SSBP3-204ENST00000371320 SESTD1Q86VW0 696 aa30.19■■■□□ 2.42
SSBP3-204ENST00000371320 SCUBE3Q8IX30 993 aa30.19■■■□□ 2.42
SSBP3-204ENST00000371320 FBF1Q8TES7 1133 aa30.19■■■□□ 2.42
SSBP3-204ENST00000371320 FAM172AQ8WUF8 416 aa30.19■■■□□ 2.42
SSBP3-204ENST00000371320 C18orf25Q96B23 403 aaPredicted RBP30.19■■■□□ 2.42
SSBP3-204ENST00000371320 ACSS3Q9H6R3 686 aa30.19■■■□□ 2.42
SSBP3-204ENST00000371320 HES2Q9Y543 173 aa30.19■■■□□ 2.42
SSBP3-204ENST00000371320 A0A1W2PPM1 405 aa30.19■■■□□ 2.42
SSBP3-204ENST00000371320 UNCXA6NJT0 531 aa30.19■■■□□ 2.42
SSBP3-204ENST00000371320 SNX16P57768 344 aa30.19■■■□□ 2.42
SSBP3-204ENST00000371320 ZBTB6Q15916 424 aa30.19■■■□□ 2.42
SSBP3-204ENST00000371320 NOTUMQ6P988 496 aa30.19■■■□□ 2.42
SSBP3-204ENST00000371320 FUKQ8N0W3 1084 aa30.19■■■□□ 2.42
SSBP3-204ENST00000371320 LRRC52Q8N7C0 313 aa30.19■■■□□ 2.42
SSBP3-204ENST00000371320 OR6B3Q8NGW1 331 aa30.19■■■□□ 2.42
SSBP3-204ENST00000371320 SLC35F5Q8WV83 523 aa30.19■■■□□ 2.42
SSBP3-204ENST00000371320 GRAMD1AQ96CP6 724 aa30.19■■■□□ 2.42
SSBP3-204ENST00000371320 ADAM33Q9BZ11 813 aa30.19■■■□□ 2.42
SSBP3-204ENST00000371320 PITPNM3Q9BZ71 974 aa30.19■■■□□ 2.42
SSBP3-204ENST00000371320 CDHR5Q9HBB8 845 aa30.19■■■□□ 2.42
SSBP3-204ENST00000371320 GPATCH2LQ9NWQ4 482 aa30.19■■■□□ 2.42
SSBP3-204ENST00000371320 GGT7Q9UJ14 662 aa30.19■■■□□ 2.42
SSBP3-204ENST00000371320 NME7Q9Y5B8 376 aa30.19■■■□□ 2.42
SSBP3-204ENST00000371320 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP30.18■■■□□ 2.42
SSBP3-204ENST00000371320 GPR32O75388 356 aa30.18■■■□□ 2.42
SSBP3-204ENST00000371320 DESP17661 470 aa30.18■■■□□ 2.42
SSBP3-204ENST00000371320 CA4P22748 312 aa30.18■■■□□ 2.42
SSBP3-204ENST00000371320 RPA3P35244 121 aaPredicted RBP30.18■■■□□ 2.42
SSBP3-204ENST00000371320 CDC42EP1Q00587 391 aa30.18■■■□□ 2.42
SSBP3-204ENST00000371320 ZC3H12AQ5D1E8 599 aaKnown RBP30.18■■■□□ 2.42
SSBP3-204ENST00000371320 PLD5Q8N7P1 536 aa30.18■■■□□ 2.42
SSBP3-204ENST00000371320 TEKT4Q8WW24 435 aa30.18■■■□□ 2.42
SSBP3-204ENST00000371320 PRKAG3Q9UGI9 489 aa30.18■■■□□ 2.42
SSBP3-204ENST00000371320 TSHRP16473 764 aa30.18■■■□□ 2.42
SSBP3-204ENST00000371320 GLRA4Q5JXX5 417 aa30.18■■■□□ 2.42
SSBP3-204ENST00000371320 CGB2Q6NT52 195 aa30.18■■■□□ 2.42
SSBP3-204ENST00000371320 OSMRQ99650 979 aa30.18■■■□□ 2.42
SSBP3-204ENST00000371320 ADCY6O43306 1168 aa30.17■■■□□ 2.42
SSBP3-204ENST00000371320 ATP2A2P16615 1042 aaKnown RBP30.17■■■□□ 2.42
SSBP3-204ENST00000371320 IL4RP24394 825 aa30.17■■■□□ 2.42
SSBP3-204ENST00000371320 PLEKHH3Q7Z736 793 aa30.17■■■□□ 2.42
SSBP3-204ENST00000371320 KHSRPQ92945 711 aaKnown RBP eCLIP30.17■■■□□ 2.426e-7■■■□□ 16.7
SSBP3-204ENST00000371320 TBCBQ99426 244 aa30.17■■■□□ 2.42
SSBP3-204ENST00000371320 PAFAH2Q99487 392 aa30.17■■■□□ 2.42
SSBP3-204ENST00000371320 CLEC11AQ9Y240 323 aa30.17■■■□□ 2.42
SSBP3-204ENST00000371320 APOL1O14791 398 aa30.16■■■□□ 2.42
SSBP3-204ENST00000371320 PAPSS1O43252 624 aaPredicted RBP30.16■■■□□ 2.42
SSBP3-204ENST00000371320 UBOX5O94941 541 aa30.16■■■□□ 2.42
SSBP3-204ENST00000371320 ADGRD1Q6QNK2 874 aa30.16■■■□□ 2.42
SSBP3-204ENST00000371320 FAM47EQ6ZV65 393 aa30.16■■■□□ 2.42
SSBP3-204ENST00000371320 UNC93AQ86WB7 457 aa30.16■■■□□ 2.42
SSBP3-204ENST00000371320 TRIM6Q9C030 488 aaPredicted RBP30.16■■■□□ 2.42
SSBP3-204ENST00000371320 PCDH18Q9HCL0 1135 aa30.16■■■□□ 2.42
SSBP3-204ENST00000371320 KAT6AQ92794 2004 aa30.16■■■□□ 2.42
SSBP3-204ENST00000371320 TYROBPO43914 113 aa30.16■■■□□ 2.42
SSBP3-204ENST00000371320 KRT4P19013 534 aa30.16■■■□□ 2.42
SSBP3-204ENST00000371320 TGM2P21980 687 aa30.16■■■□□ 2.42
SSBP3-204ENST00000371320 CYB5D1Q6P9G0 228 aa30.16■■■□□ 2.42
SSBP3-204ENST00000371320 GBP7Q8N8V2 638 aaPredicted RBP30.16■■■□□ 2.42
SSBP3-204ENST00000371320 STK32AQ8WU08 396 aa30.16■■■□□ 2.42
SSBP3-204ENST00000371320 USP6NLQ92738 828 aa30.16■■■□□ 2.42
SSBP3-204ENST00000371320 DHRS4Q9BTZ2 278 aa30.16■■■□□ 2.42
SSBP3-204ENST00000371320 USP29Q9HBJ7 922 aa30.16■■■□□ 2.42
SSBP3-204ENST00000371320 CHMP2BQ9UQN3 213 aa30.16■■■□□ 2.42
SSBP3-204ENST00000371320 HEY1Q9Y5J3 304 aa30.16■■■□□ 2.42
SSBP3-204ENST00000371320 GLTPD2A6NH11 291 aa30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms