RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 F8VZ95 297 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 TPPPO94811 219 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 CCDC175P0C221 793 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 MUTP22033 750 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 MYH11P35749 1972 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 LHX1P48742 406 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 CORO7P57737 925 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 RPL10AP62906 217 aaKnown RBP7.38□□□□□ -1.23
USP1-202ENST00000371146 DEUP1Q05D60 604 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 COL9A2Q14055 689 aaPredicted RBP7.38□□□□□ -1.23
USP1-202ENST00000371146 UPP1Q16831 310 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 CRELD2Q6UXH1 353 aaPredicted RBP7.38□□□□□ -1.23
USP1-202ENST00000371146 RSPO2Q6UXX9 243 aaPredicted RBP7.38□□□□□ -1.23
USP1-202ENST00000371146 DENND1CQ8IV53 801 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 RGL4Q8IZJ4 473 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 CARNMT1Q8N4J0 409 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 CCNYQ8ND76 341 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 ZNF461Q8TAF7 563 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 ZSCAN18Q8TBC5 510 aaPredicted RBP7.38□□□□□ -1.23
USP1-202ENST00000371146 SLC20A1Q8WUM9 679 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 KHSRPQ92945 711 aaKnown RBP eCLIP7.38□□□□□ -1.239e-6■□□□□ 10.6
USP1-202ENST00000371146 SLC35C1Q96A29 364 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 CCDC51Q96ER9 411 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 RPP25Q9BUL9 199 aaKnown RBP7.38□□□□□ -1.23
USP1-202ENST00000371146 SMOC2Q9H3U7 446 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 ZFP14Q9HCL3 533 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 TMLHEQ9NVH6 421 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 GPATCH2LQ9NWQ4 482 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 YIPF1Q9Y548 306 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 LRRC53A6NM62 1247 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 H3BNC9 293 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 SCAMP1O15126 338 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 TLR5O60602 858 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 N4BP1O75113 896 aaKnown RBP7.38□□□□□ -1.23
USP1-202ENST00000371146 ZNF623O75123 536 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 STK10O94804 968 aaKnown RBP7.38□□□□□ -1.23
USP1-202ENST00000371146 DCNP07585 359 aaKnown RBP7.38□□□□□ -1.23
USP1-202ENST00000371146 ZNF24P17028 368 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 STIP1P31948 543 aaKnown RBP7.38□□□□□ -1.23
USP1-202ENST00000371146 TAF5Q15542 800 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 RNF219Q5W0B1 726 aaPredicted RBP7.38□□□□□ -1.23
USP1-202ENST00000371146 TTI2Q6NXR4 508 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 RFWD3Q6PCD5 774 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 CHPFQ8IZ52 775 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 C17orf53Q8N3J3 647 aaPredicted RBP7.38□□□□□ -1.23
USP1-202ENST00000371146 MSANTD4Q8NCY6 345 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 TMEM176AQ96HP8 235 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 BTBD6Q96KE9 485 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 CLSTN3Q9BQT9 956 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 SYNDIG1Q9H7V2 258 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 GMIPQ9P107 970 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 CFAP97Q9P2B7 532 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 TJP2Q9UDY2 1190 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 ITGA11Q9UKX5 1188 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 RWDD3Q9Y3V2 267 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 TYW5A2RUC4 315 aaKnown RBP7.37□□□□□ -1.23
USP1-202ENST00000371146 C2orf71A6NGG8 1288 aa7.37□□□□□ -1.23
USP1-202ENST00000371146 MYL1P05976 194 aa7.37□□□□□ -1.23
USP1-202ENST00000371146 RALAP11233 206 aa7.37□□□□□ -1.23
USP1-202ENST00000371146 PTPN2P17706 415 aa7.37□□□□□ -1.23
USP1-202ENST00000371146 ETFBP38117 255 aa7.37□□□□□ -1.23
USP1-202ENST00000371146 VPS41P49754 854 aa7.37□□□□□ -1.23
USP1-202ENST00000371146 SESN3P58005 492 aa7.37□□□□□ -1.23
USP1-202ENST00000371146 MTM1Q13496 603 aa7.37□□□□□ -1.23
USP1-202ENST00000371146 CENPPQ6IPU0 288 aa7.37□□□□□ -1.23
USP1-202ENST00000371146 TDRD5Q8NAT2 981 aaKnown RBP7.37□□□□□ -1.23
USP1-202ENST00000371146 PBXIP1Q96AQ6 731 aa7.37□□□□□ -1.23
USP1-202ENST00000371146 NTPCRQ9BSD7 190 aaKnown RBP7.37□□□□□ -1.23
USP1-202ENST00000371146 IRX2Q9BZI1 471 aaPredicted RBP7.37□□□□□ -1.23
USP1-202ENST00000371146 DPP7Q9UHL4 492 aa7.37□□□□□ -1.23
USP1-202ENST00000371146 MTCH2Q9Y6C9 303 aa7.37□□□□□ -1.23
USP1-202ENST00000371146 PLXNB2O15031 1838 aa7.37□□□□□ -1.23
USP1-202ENST00000371146 ATP8B3O60423 1300 aa7.37□□□□□ -1.23
USP1-202ENST00000371146 NEDD8-MDP1E9PL57 170 aa7.37□□□□□ -1.23
USP1-202ENST00000371146 SEC24AO95486 1093 aa7.37□□□□□ -1.23
USP1-202ENST00000371146 MMEP08473 750 aa7.37□□□□□ -1.23
USP1-202ENST00000371146 PLEKP08567 350 aaPredicted RBP7.37□□□□□ -1.23
USP1-202ENST00000371146 CTSAP10619 480 aa7.37□□□□□ -1.23
USP1-202ENST00000371146 RPL9P32969 192 aaKnown RBP7.37□□□□□ -1.23
USP1-202ENST00000371146 PPP1R2P41236 205 aa7.37□□□□□ -1.23
USP1-202ENST00000371146 RBL2Q08999 1139 aa7.37□□□□□ -1.23
USP1-202ENST00000371146 PSMD6Q15008 389 aa7.37□□□□□ -1.23
USP1-202ENST00000371146 KYAT1Q16773 422 aa7.37□□□□□ -1.23
USP1-202ENST00000371146 KCNT1Q5JUK3 1230 aa7.37□□□□□ -1.23
USP1-202ENST00000371146 TMEM31Q5JXX7 168 aa7.37□□□□□ -1.23
USP1-202ENST00000371146 DNAJC24Q6P3W2 148 aa7.37□□□□□ -1.23
USP1-202ENST00000371146 TRIM65Q6PJ69 517 aa7.37□□□□□ -1.23
USP1-202ENST00000371146 SND1Q7KZF4 910 aaKnown RBP eCLIP7.37□□□□□ -1.23
USP1-202ENST00000371146 TRIML1Q8N9V2 468 aa7.37□□□□□ -1.23
USP1-202ENST00000371146 EHBP1Q8NDI1 1231 aa7.37□□□□□ -1.23
USP1-202ENST00000371146 GSTCDQ8NEC7 633 aa7.37□□□□□ -1.23
USP1-202ENST00000371146 CLEC4CQ8WTT0 213 aa7.37□□□□□ -1.23
USP1-202ENST00000371146 RPRD1AQ96P16 312 aaPredicted RBP7.37□□□□□ -1.23
USP1-202ENST00000371146 FAM118BQ9BPY3 351 aa7.37□□□□□ -1.23
USP1-202ENST00000371146 TRAIPQ9BWF2 469 aa7.37□□□□□ -1.23
USP1-202ENST00000371146 CCSER2Q9H7U1 834 aa7.37□□□□□ -1.23
USP1-202ENST00000371146 SLC24A3Q9HC58 644 aa7.37□□□□□ -1.23
USP1-202ENST00000371146 HEBP1Q9NRV9 189 aa7.37□□□□□ -1.23
USP1-202ENST00000371146 RBM12Q9NTZ6 932 aaKnown RBP7.37□□□□□ -1.23
USP1-202ENST00000371146 FAM86C1Q9NVL1 165 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms