RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 ARHGEF19Q8IW93 802 aa20.34■□□□□ 0.85
LMO4-202ENST00000370544 NR1H4Q96RI1 486 aaPredicted RBP20.34■□□□□ 0.85
LMO4-202ENST00000370544 LRRC40Q9H9A6 602 aa20.34■□□□□ 0.85
LMO4-202ENST00000370544 WWOXQ9NZC7 414 aa20.34■□□□□ 0.85
LMO4-202ENST00000370544 CASTOR2A6NHX0 329 aa20.34■□□□□ 0.85
LMO4-202ENST00000370544 PJA2O43164 708 aa20.34■□□□□ 0.85
LMO4-202ENST00000370544 CDH2P19022 906 aaPredicted RBP20.34■□□□□ 0.85
LMO4-202ENST00000370544 TKTL1P51854 596 aa20.34■□□□□ 0.85
LMO4-202ENST00000370544 CSE1LP55060 971 aaKnown RBP20.34■□□□□ 0.85
LMO4-202ENST00000370544 LRRC74AQ0VAA2 488 aa20.34■□□□□ 0.85
LMO4-202ENST00000370544 LRRC34Q8IZ02 419 aa20.34■□□□□ 0.85
LMO4-202ENST00000370544 ARRDC4Q8NCT1 418 aa20.34■□□□□ 0.85
LMO4-202ENST00000370544 REPS2Q8NFH8 660 aa20.34■□□□□ 0.85
LMO4-202ENST00000370544 TTLL9Q3SXZ7 439 aa20.34■□□□□ 0.85
LMO4-202ENST00000370544 FBXW10Q5XX13 1052 aa20.34■□□□□ 0.85
LMO4-202ENST00000370544 ILDR1Q86SU0 546 aaPredicted RBP20.34■□□□□ 0.85
LMO4-202ENST00000370544 MCOLN2Q8IZK6 566 aa20.34■□□□□ 0.85
LMO4-202ENST00000370544 SEPT8Q92599 483 aa20.34■□□□□ 0.85
LMO4-202ENST00000370544 UBE2OQ9C0C9 1292 aaKnown RBP20.34■□□□□ 0.85
LMO4-202ENST00000370544 SCUBE2Q9NQ36 999 aa20.34■□□□□ 0.85
LMO4-202ENST00000370544 BARX2Q9UMQ3 279 aaPredicted RBP20.34■□□□□ 0.85
LMO4-202ENST00000370544 MYO1GB0I1T2 1018 aa20.33■□□□□ 0.85
LMO4-202ENST00000370544 SOX11P35716 441 aa20.33■□□□□ 0.85
LMO4-202ENST00000370544 AARS2Q5JTZ9 985 aaKnown RBP20.33■□□□□ 0.85
LMO4-202ENST00000370544 CLEC4FQ8N1N0 589 aa20.33■□□□□ 0.85
LMO4-202ENST00000370544 VGLL2Q8N8G2 317 aa20.33■□□□□ 0.85
LMO4-202ENST00000370544 MRPS31Q92665 395 aaKnown RBP20.33■□□□□ 0.85
LMO4-202ENST00000370544 LOC100653049A0A140TA62 436 aa20.33■□□□□ 0.85
LMO4-202ENST00000370544 KRT34O76011 436 aa20.33■□□□□ 0.85
LMO4-202ENST00000370544 HSPA1AP0DMV8 641 aaKnown RBP20.33■□□□□ 0.85
LMO4-202ENST00000370544 HSPA1BP0DMV9 641 aaKnown RBP20.33■□□□□ 0.85
LMO4-202ENST00000370544 CARNMT1Q8N4J0 409 aa20.33■□□□□ 0.85
LMO4-202ENST00000370544 ILKAPQ9H0C8 392 aaPredicted RBP20.33■□□□□ 0.85
LMO4-202ENST00000370544 IL1RL2Q9HB29 575 aa20.33■□□□□ 0.85
LMO4-202ENST00000370544 PHTF1Q9UMS5 762 aa20.33■□□□□ 0.85
LMO4-202ENST00000370544 TIMM44O43615 452 aa20.33■□□□□ 0.84
LMO4-202ENST00000370544 FKBP9O95302 570 aa20.33■□□□□ 0.84
LMO4-202ENST00000370544 ZNF280DQ6N043 979 aa20.33■□□□□ 0.84
LMO4-202ENST00000370544 FKBP9P1Q75LS8 142 aa20.33■□□□□ 0.84
LMO4-202ENST00000370544 OTULINQ96BN8 352 aa20.33■□□□□ 0.84
LMO4-202ENST00000370544 CDC42EP4Q9H3Q1 356 aaKnown RBP20.33■□□□□ 0.84
LMO4-202ENST00000370544 IARS2Q9NSE4 1012 aaKnown RBP20.33■□□□□ 0.84
LMO4-202ENST00000370544 DOLKQ9UPQ8 538 aa20.33■□□□□ 0.84
LMO4-202ENST00000370544 A0A087X0B3 334 aa20.33■□□□□ 0.84
LMO4-202ENST00000370544 OVGP1Q12889 678 aa20.33■□□□□ 0.84
LMO4-202ENST00000370544 TMBIM4Q9HC24 238 aa20.33■□□□□ 0.84
LMO4-202ENST00000370544 H2AFYO75367 372 aaKnown RBP20.32■□□□□ 0.84
LMO4-202ENST00000370544 MAP3K10Q02779 954 aa20.32■□□□□ 0.84
LMO4-202ENST00000370544 MED21Q13503 144 aa20.32■□□□□ 0.84
LMO4-202ENST00000370544 TMEM132BQ14DG7 1078 aa20.32■□□□□ 0.84
LMO4-202ENST00000370544 DNAAF5Q86Y56 855 aa20.32■□□□□ 0.84
LMO4-202ENST00000370544 STARD7Q9NQZ5 370 aa20.32■□□□□ 0.84
LMO4-202ENST00000370544 DDX43Q9NXZ2 648 aaKnown RBP20.32■□□□□ 0.84
LMO4-202ENST00000370544 TRPM5Q9NZQ8 1165 aa20.32■□□□□ 0.84
LMO4-202ENST00000370544 DNAJB3Q8WWF6 145 aa20.32■□□□□ 0.84
LMO4-202ENST00000370544 TMEM161AQ9NX61 479 aa20.32■□□□□ 0.84
LMO4-202ENST00000370544 RNF112Q9ULX5 631 aa20.32■□□□□ 0.84
LMO4-202ENST00000370544 SLC12A8A0AV02 714 aa20.32■□□□□ 0.84
LMO4-202ENST00000370544 CPA2P48052 419 aa20.32■□□□□ 0.84
LMO4-202ENST00000370544 ARL4DP49703 201 aa20.32■□□□□ 0.84
LMO4-202ENST00000370544 CCDC15Q0P6D6 951 aa20.32■□□□□ 0.84
LMO4-202ENST00000370544 LAYNQ6UX15 382 aa20.32■□□□□ 0.84
LMO4-202ENST00000370544 ZFPM1Q8IX07 1006 aa20.32■□□□□ 0.84
LMO4-202ENST00000370544 RUVBL2Q9Y230 463 aaKnown RBP20.32■□□□□ 0.84
LMO4-202ENST00000370544 AP5Z1O43299 807 aa20.32■□□□□ 0.84
LMO4-202ENST00000370544 ADCY3O60266 1144 aa20.32■□□□□ 0.84
LMO4-202ENST00000370544 DMC1Q14565 340 aa20.32■□□□□ 0.84
LMO4-202ENST00000370544 DENND1BQ6P3S1 775 aa20.32■□□□□ 0.84
LMO4-202ENST00000370544 PAFAH2Q99487 392 aa20.32■□□□□ 0.84
LMO4-202ENST00000370544 P2RX7Q99572 595 aaKnown RBP20.32■□□□□ 0.84
LMO4-202ENST00000370544 INTS13Q9NVM9 706 aa20.32■□□□□ 0.84
LMO4-202ENST00000370544 SELENONQ9NZV5 590 aa20.32■□□□□ 0.84
LMO4-202ENST00000370544 TSPAN16Q9UKR8 245 aa20.32■□□□□ 0.84
LMO4-202ENST00000370544 ZBTB39O15060 712 aa20.32■□□□□ 0.84
LMO4-202ENST00000370544 ARIH2O95376 493 aa20.32■□□□□ 0.84
LMO4-202ENST00000370544 URODP06132 367 aa20.32■□□□□ 0.84
LMO4-202ENST00000370544 CYP2F1P24903 491 aa20.32■□□□□ 0.84
LMO4-202ENST00000370544 AASDHQ4L235 1098 aaPredicted RBP20.32■□□□□ 0.84
LMO4-202ENST00000370544 MAGEB18Q96M61 343 aa20.32■□□□□ 0.84
LMO4-202ENST00000370544 FICDQ9BVA6 458 aa20.32■□□□□ 0.84
LMO4-202ENST00000370544 YIPF2Q9BWQ6 316 aa20.32■□□□□ 0.84
LMO4-202ENST00000370544 VTA1Q9NP79 307 aa20.32■□□□□ 0.84
LMO4-202ENST00000370544 TMEM150BA6NC51 233 aa20.31■□□□□ 0.84
LMO4-202ENST00000370544 IGF2BP3O00425 579 aaKnown RBP eCLIP20.31■□□□□ 0.84
LMO4-202ENST00000370544 MZF1P28698 734 aaPredicted RBP20.31■□□□□ 0.84
LMO4-202ENST00000370544 NDST1P52848 882 aa20.31■□□□□ 0.84
LMO4-202ENST00000370544 SLC12A3P55017 1021 aa20.31■□□□□ 0.84
LMO4-202ENST00000370544 NAT9Q9BTE0 207 aa20.31■□□□□ 0.84
LMO4-202ENST00000370544 FUT8Q9BYC5 575 aa20.31■□□□□ 0.84
LMO4-202ENST00000370544 BRD8Q9H0E9 1235 aa20.31■□□□□ 0.84
LMO4-202ENST00000370544 SHCBP1LQ9BZQ2 653 aa20.31■□□□□ 0.84
LMO4-202ENST00000370544 COPAP53621 1224 aa20.31■□□□□ 0.84
LMO4-202ENST00000370544 DDR1Q08345 913 aa20.31■□□□□ 0.84
LMO4-202ENST00000370544 WASHC5Q12768 1159 aa20.31■□□□□ 0.84
LMO4-202ENST00000370544 FBXO25Q8TCJ0 367 aa20.31■□□□□ 0.84
LMO4-202ENST00000370544 SYT15Q9BQS2 421 aa20.31■□□□□ 0.84
LMO4-202ENST00000370544 MTG1Q9BT17 334 aaPredicted RBP20.31■□□□□ 0.84
LMO4-202ENST00000370544 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.31■□□□□ 0.84
LMO4-202ENST00000370544 SLC25A13Q9UJS0 675 aa20.31■□□□□ 0.84
LMO4-202ENST00000370544 AK9Q5TCS8 1911 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms