RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 ZSCAN32Q9NX65 697 aa15.83■□□□□ 0.12
LMO4-201ENST00000370542 TBC1D7Q9P0N9 293 aa15.83■□□□□ 0.12
LMO4-201ENST00000370542 SAR1BQ9Y6B6 198 aa15.83■□□□□ 0.12
LMO4-201ENST00000370542 DENND4CQ5VZ89 1909 aa15.83■□□□□ 0.12
LMO4-201ENST00000370542 KIF26AQ9ULI4 1882 aaPredicted RBP15.82■□□□□ 0.12
LMO4-201ENST00000370542 A0A1W2PQC6 194 aa15.82■□□□□ 0.12
LMO4-201ENST00000370542 MYBPHLA2RUH7 354 aa15.82■□□□□ 0.12
LMO4-201ENST00000370542 GABRDO14764 452 aa15.82■□□□□ 0.12
LMO4-201ENST00000370542 KRT86O43790 486 aa15.82■□□□□ 0.12
LMO4-201ENST00000370542 CDC25CP30307 473 aa15.82■□□□□ 0.12
LMO4-201ENST00000370542 HOXD13P35453 343 aa15.82■□□□□ 0.12
LMO4-201ENST00000370542 CSTF1Q05048 431 aaKnown RBP15.82■□□□□ 0.12
LMO4-201ENST00000370542 WDR44Q5JSH3 913 aa15.82■□□□□ 0.12
LMO4-201ENST00000370542 TMEM150AQ86TG1 271 aa15.82■□□□□ 0.12
LMO4-201ENST00000370542 DCP1BQ8IZD4 617 aaKnown RBP15.82■□□□□ 0.12
LMO4-201ENST00000370542 TMEM86AQ8N2M4 240 aa15.82■□□□□ 0.12
LMO4-201ENST00000370542 NOC3LQ8WTT2 800 aaKnown RBP15.82■□□□□ 0.12
LMO4-201ENST00000370542 SAAL1Q96ER3 474 aa15.82■□□□□ 0.12
LMO4-201ENST00000370542 LPIN3Q9BQK8 851 aa15.82■□□□□ 0.12
LMO4-201ENST00000370542 NUP58Q9BVL2 599 aa15.82■□□□□ 0.12
LMO4-201ENST00000370542 ATXN3LQ9H3M9 355 aa15.82■□□□□ 0.12
LMO4-201ENST00000370542 SLITRK6Q9H5Y7 841 aa15.82■□□□□ 0.12
LMO4-201ENST00000370542 C8orf33Q9H7E9 229 aaPredicted RBP15.82■□□□□ 0.12
LMO4-201ENST00000370542 SAMSN1Q9NSI8 373 aaKnown RBP15.82■□□□□ 0.12
LMO4-201ENST00000370542 TMLHEQ9NVH6 421 aa15.82■□□□□ 0.12
LMO4-201ENST00000370542 RBAKQ9NYW8 714 aaPredicted RBP15.82■□□□□ 0.12
LMO4-201ENST00000370542 SIX4Q9UIU6 781 aa15.82■□□□□ 0.12
LMO4-201ENST00000370542 RWDD2AQ9UIY3 292 aa15.82■□□□□ 0.12
LMO4-201ENST00000370542 GGA2Q9UJY4 613 aa15.82■□□□□ 0.12
LMO4-201ENST00000370542 ITGA11Q9UKX5 1188 aa15.82■□□□□ 0.12
LMO4-201ENST00000370542 KIF1CO43896 1103 aaKnown RBP15.81■□□□□ 0.12
LMO4-201ENST00000370542 PAPSS2O95340 614 aaPredicted RBP15.81■□□□□ 0.12
LMO4-201ENST00000370542 IPO7O95373 1038 aaKnown RBP15.81■□□□□ 0.12
LMO4-201ENST00000370542 SYF2O95926 243 aaKnown RBP15.81■□□□□ 0.12
LMO4-201ENST00000370542 F11P03951 625 aa15.81■□□□□ 0.12
LMO4-201ENST00000370542 ITGB3P05106 788 aa15.81■□□□□ 0.12
LMO4-201ENST00000370542 EPB41P11171 864 aaKnown RBP15.81■□□□□ 0.12
LMO4-201ENST00000370542 IDEP14735 1019 aa15.81■□□□□ 0.12
LMO4-201ENST00000370542 POLR2BP30876 1174 aaKnown RBP15.81■□□□□ 0.12
LMO4-201ENST00000370542 CASP14P31944 242 aa15.81■□□□□ 0.12
LMO4-201ENST00000370542 CYLC1P35663 651 aaPredicted RBP15.81■□□□□ 0.12
LMO4-201ENST00000370542 ARHGAP25P42331 645 aa15.81■□□□□ 0.12
LMO4-201ENST00000370542 GSCP56915 257 aaPredicted RBP15.81■□□□□ 0.12
LMO4-201ENST00000370542 EHHADHQ08426 723 aa15.81■□□□□ 0.12
LMO4-201ENST00000370542 NNTQ13423 1086 aa15.81■□□□□ 0.12
LMO4-201ENST00000370542 GAS6Q14393 721 aa15.81■□□□□ 0.12
LMO4-201ENST00000370542 VEPH1Q14D04 833 aa15.81■□□□□ 0.12
LMO4-201ENST00000370542 NFE2Q16621 373 aaPredicted RBP15.81■□□□□ 0.12
LMO4-201ENST00000370542 MGAT5BQ3V5L5 792 aa15.81■□□□□ 0.12
LMO4-201ENST00000370542 ARHGAP15Q53QZ3 475 aa15.81■□□□□ 0.12
LMO4-201ENST00000370542 GPR158Q5T848 1215 aa15.81■□□□□ 0.12
LMO4-201ENST00000370542 EPM2AIP1Q7L775 607 aaPredicted RBP15.81■□□□□ 0.12
LMO4-201ENST00000370542 CCDC65Q8IXS2 484 aa15.81■□□□□ 0.12
LMO4-201ENST00000370542 SEPT5Q99719 369 aaPredicted RBP15.81■□□□□ 0.12
LMO4-201ENST00000370542 SLC46A2Q9BY10 475 aa15.81■□□□□ 0.12
LMO4-201ENST00000370542 TRIM9Q9C026 710 aa15.81■□□□□ 0.12
LMO4-201ENST00000370542 LRRC27Q9C0I9 530 aa15.81■□□□□ 0.12
LMO4-201ENST00000370542 LMAN1LQ9HAT1 526 aa15.81■□□□□ 0.12
LMO4-201ENST00000370542 ANGPTL2Q9UKU9 493 aa15.81■□□□□ 0.12
LMO4-201ENST00000370542 AGAP1Q9UPQ3 857 aa15.81■□□□□ 0.12
LMO4-201ENST00000370542 PCDHB5Q9Y5E4 795 aa15.81■□□□□ 0.12
LMO4-201ENST00000370542 EPN1Q9Y6I3 576 aaPredicted RBP15.81■□□□□ 0.12
LMO4-201ENST00000370542 GOLGA6CA6NDK9 693 aa15.8■□□□□ 0.12
LMO4-201ENST00000370542 LRRIQ3A6PVS8 624 aaPredicted RBP15.8■□□□□ 0.12
LMO4-201ENST00000370542 SLC30A4O14863 429 aa15.8■□□□□ 0.12
LMO4-201ENST00000370542 PRAMEF12O95522 483 aa15.8■□□□□ 0.12
LMO4-201ENST00000370542 GYPCP04921 128 aa15.8■□□□□ 0.12
LMO4-201ENST00000370542 GOLGA6DP0CG33 693 aa15.8■□□□□ 0.12
LMO4-201ENST00000370542 PRLRP16471 622 aa15.8■□□□□ 0.12
LMO4-201ENST00000370542 CCNE1P24864 410 aa15.8■□□□□ 0.12
LMO4-201ENST00000370542 TFAMQ00059 246 aaKnown RBP15.8■□□□□ 0.12
LMO4-201ENST00000370542 MTF1Q14872 753 aa15.8■□□□□ 0.12
LMO4-201ENST00000370542 DPH6Q7L8W6 267 aa15.8■□□□□ 0.12
LMO4-201ENST00000370542 ZNF572Q7Z3I7 529 aaPredicted RBP15.8■□□□□ 0.12
LMO4-201ENST00000370542 RALGPS2Q86X27 583 aaPredicted RBP15.8■□□□□ 0.12
LMO4-201ENST00000370542 CCDC170Q8IYT3 715 aa15.8■□□□□ 0.12
LMO4-201ENST00000370542 SYCP3Q8IZU3 236 aa15.8■□□□□ 0.12
LMO4-201ENST00000370542 GPD1LQ8N335 351 aa15.8■□□□□ 0.12
LMO4-201ENST00000370542 TOP6BLQ8N6T0 577 aa15.8■□□□□ 0.12
LMO4-201ENST00000370542 GLIS3Q8NEA6 775 aa15.8■□□□□ 0.12
LMO4-201ENST00000370542 OR8K1Q8NGG5 319 aa15.8■□□□□ 0.12
LMO4-201ENST00000370542 ZNF507Q8TCN5 953 aa15.8■□□□□ 0.12
LMO4-201ENST00000370542 SECISBP2LQ93073 1101 aaKnown RBP15.8■□□□□ 0.12
LMO4-201ENST00000370542 MYRFLQ96LU7 910 aa15.8■□□□□ 0.12
LMO4-201ENST00000370542 GOLGA6AQ9NYA3 693 aa15.8■□□□□ 0.12
LMO4-201ENST00000370542 NDRG2Q9UN36 371 aaKnown RBP15.8■□□□□ 0.12
LMO4-201ENST00000370542 EIF3DO15371 548 aaKnown RBP eCLIP15.79■□□□□ 0.12
LMO4-201ENST00000370542 CHRM1P11229 460 aaPredicted RBP15.79■□□□□ 0.12
LMO4-201ENST00000370542 DDX6P26196 483 aaKnown RBP eCLIP15.79■□□□□ 0.12
LMO4-201ENST00000370542 TNFRSF8P28908 595 aa15.79■□□□□ 0.12
LMO4-201ENST00000370542 CTHP32929 405 aa15.79■□□□□ 0.12
LMO4-201ENST00000370542 PPP1R2P41236 205 aa15.79■□□□□ 0.12
LMO4-201ENST00000370542 COPB1P53618 953 aaKnown RBP15.79■□□□□ 0.12
LMO4-201ENST00000370542 RBP5P82980 135 aa15.79■□□□□ 0.12
LMO4-201ENST00000370542 SKOR1P84550 965 aa15.79■□□□□ 0.12
LMO4-201ENST00000370542 SHC2P98077 582 aa15.79■□□□□ 0.12
LMO4-201ENST00000370542 TSPY1Q01534 308 aa15.79■□□□□ 0.12
LMO4-201ENST00000370542 CFAP221Q4G0U5 840 aa15.79■□□□□ 0.12
LMO4-201ENST00000370542 INTS6LQ5JSJ4 861 aaKnown RBP15.79■□□□□ 0.12
LMO4-201ENST00000370542 FAM171BQ6P995 826 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms