RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 RAP1GAPP47736 663 aa17.11■□□□□ 0.33
VMA21-202ENST00000370361 VAMP7P51809 220 aa17.11■□□□□ 0.33
VMA21-202ENST00000370361 SLC5A3P53794 718 aa17.11■□□□□ 0.33
VMA21-202ENST00000370361 ATXN1P54253 815 aaKnown RBP17.11■□□□□ 0.33
VMA21-202ENST00000370361 MRPS21P82921 87 aaKnown RBP17.11■□□□□ 0.33
VMA21-202ENST00000370361 BECN1Q14457 450 aa17.11■□□□□ 0.33
VMA21-202ENST00000370361 NUDT18Q6ZVK8 323 aa17.11■□□□□ 0.33
VMA21-202ENST00000370361 FILIP1Q7Z7B0 1213 aa17.11■□□□□ 0.33
VMA21-202ENST00000370361 ADGRG2Q8IZP9 1017 aa17.11■□□□□ 0.33
VMA21-202ENST00000370361 GTPBP4Q9BZE4 634 aaKnown RBP17.11■□□□□ 0.33
VMA21-202ENST00000370361 RNF38Q9H0F5 515 aa17.11■□□□□ 0.33
VMA21-202ENST00000370361 FBRSL1Q9HCM7 1045 aaKnown RBP17.11■□□□□ 0.33
VMA21-202ENST00000370361 CSNK1G1Q9HCP0 422 aa17.11■□□□□ 0.33
VMA21-202ENST00000370361 KRT82Q9NSB4 513 aa17.11■□□□□ 0.33
VMA21-202ENST00000370361 C2orf42Q9NWW7 574 aa17.11■□□□□ 0.33
VMA21-202ENST00000370361 KIAA1549LQ6ZVL6 1849 aa17.1■□□□□ 0.33
VMA21-202ENST00000370361 CLDN5O00501 218 aa17.1■□□□□ 0.33
VMA21-202ENST00000370361 TNFRSF10BO14763 440 aa17.1■□□□□ 0.33
VMA21-202ENST00000370361 SLC30A4O14863 429 aa17.1■□□□□ 0.33
VMA21-202ENST00000370361 AP1G2O75843 785 aa17.1■□□□□ 0.33
VMA21-202ENST00000370361 RHOBTB1O94844 696 aa17.1■□□□□ 0.33
VMA21-202ENST00000370361 EPN2O95208 641 aa17.1■□□□□ 0.33
VMA21-202ENST00000370361 CYP17A1P05093 508 aa17.1■□□□□ 0.33
VMA21-202ENST00000370361 ZDHHC11BP0C7U3 371 aa17.1■□□□□ 0.33
VMA21-202ENST00000370361 PSMC2P35998 433 aaKnown RBP17.1■□□□□ 0.33
VMA21-202ENST00000370361 NDUFA8P51970 172 aa17.1■□□□□ 0.33
VMA21-202ENST00000370361 LIMK1P53667 647 aa17.1■□□□□ 0.33
VMA21-202ENST00000370361 CACNA2D1P54289 1103 aa17.1■□□□□ 0.33
VMA21-202ENST00000370361 CDH8P55286 799 aa17.1■□□□□ 0.33
VMA21-202ENST00000370361 GOLGA8FQ08AF8 430 aa17.1■□□□□ 0.33
VMA21-202ENST00000370361 GOLGA8DPQ0D2H9 430 aa17.1■□□□□ 0.33
VMA21-202ENST00000370361 INCA1Q0VD86 236 aa17.1■□□□□ 0.33
VMA21-202ENST00000370361 DPYDQ12882 1025 aa17.1■□□□□ 0.33
VMA21-202ENST00000370361 DMC1Q14565 340 aa17.1■□□□□ 0.33
VMA21-202ENST00000370361 DHCR24Q15392 516 aa17.1■□□□□ 0.33
VMA21-202ENST00000370361 ELF2Q15723 593 aa17.1■□□□□ 0.33
VMA21-202ENST00000370361 EDRF1Q3B7T1 1238 aa17.1■□□□□ 0.33
VMA21-202ENST00000370361 PKN3Q6P5Z2 889 aa17.1■□□□□ 0.33
VMA21-202ENST00000370361 KRBA2Q6ZNG9 492 aa17.1■□□□□ 0.33
VMA21-202ENST00000370361 FUKQ8N0W3 1084 aa17.1■□□□□ 0.33
VMA21-202ENST00000370361 KCNV2Q8TDN2 545 aa17.1■□□□□ 0.33
VMA21-202ENST00000370361 USP33Q8TEY7 942 aa17.1■□□□□ 0.33
VMA21-202ENST00000370361 LINC00597Q9H2U6 94 aa17.1■□□□□ 0.33
VMA21-202ENST00000370361 TLR8Q9NR97 1041 aaKnown RBP17.1■□□□□ 0.33
VMA21-202ENST00000370361 TMEM30AQ9NV96 361 aa17.1■□□□□ 0.33
VMA21-202ENST00000370361 CFAP97Q9P2B7 532 aa17.1■□□□□ 0.33
VMA21-202ENST00000370361 RALGAPA1Q6GYQ0 2036 aa17.09■□□□□ 0.33
VMA21-202ENST00000370361 STX10O60499 249 aa17.09■□□□□ 0.33
VMA21-202ENST00000370361 APODP05090 189 aa17.09■□□□□ 0.33
VMA21-202ENST00000370361 ZNF806P0C7X5 589 aa17.09■□□□□ 0.33
VMA21-202ENST00000370361 FAM200BP0CF97 657 aa17.09■□□□□ 0.33
VMA21-202ENST00000370361 OPRD1P41143 372 aa17.09■□□□□ 0.33
VMA21-202ENST00000370361 ASPAP45381 313 aa17.09■□□□□ 0.33
VMA21-202ENST00000370361 DGKEP52429 567 aa17.09■□□□□ 0.33
VMA21-202ENST00000370361 NDST1P52848 882 aa17.09■□□□□ 0.33
VMA21-202ENST00000370361 MCCD1P59942 119 aaPredicted RBP17.09■□□□□ 0.33
VMA21-202ENST00000370361 DLG4P78352 724 aa17.09■□□□□ 0.33
VMA21-202ENST00000370361 ZXDBP98169 803 aa17.09■□□□□ 0.33
VMA21-202ENST00000370361 SRSF5Q13243 272 aaKnown RBP17.09■□□□□ 0.33
VMA21-202ENST00000370361 SCARA5Q6ZMJ2 495 aa17.09■□□□□ 0.33
VMA21-202ENST00000370361 ACOT1Q86TX2 421 aa17.09■□□□□ 0.33
VMA21-202ENST00000370361 C12orf50Q8NA57 414 aaPredicted RBP17.09■□□□□ 0.33
VMA21-202ENST00000370361 TSTD1Q8NFU3 115 aa17.09■□□□□ 0.33
VMA21-202ENST00000370361 KCNK16Q96T55 309 aa17.09■□□□□ 0.33
VMA21-202ENST00000370361 PNKPQ96T60 521 aa17.09■□□□□ 0.33
VMA21-202ENST00000370361 NACA2Q9H009 215 aa17.09■□□□□ 0.33
VMA21-202ENST00000370361 RMND1Q9NWS8 449 aa17.09■□□□□ 0.33
VMA21-202ENST00000370361 SH3BP1Q9Y3L3 701 aa17.09■□□□□ 0.33
VMA21-202ENST00000370361 PCDHA5Q9Y5H7 936 aa17.09■□□□□ 0.33
VMA21-202ENST00000370361 DNAH14Q0VDD8 3507 aa17.09■□□□□ 0.33
VMA21-202ENST00000370361 A0A0A0MRY4 1105 aa17.08■□□□□ 0.32
VMA21-202ENST00000370361 COCHO43405 550 aa17.08■□□□□ 0.32
VMA21-202ENST00000370361 ALDH1A2O94788 518 aa17.08■□□□□ 0.32
VMA21-202ENST00000370361 HLA-DRAP01903 254 aa17.08■□□□□ 0.32
VMA21-202ENST00000370361 ADH5P11766 374 aa17.08■□□□□ 0.32
VMA21-202ENST00000370361 GRIA2P42262 883 aa17.08■□□□□ 0.32
VMA21-202ENST00000370361 TNFRSF4P43489 277 aa17.08■□□□□ 0.32
VMA21-202ENST00000370361 GAD2Q05329 585 aa17.08■□□□□ 0.32
VMA21-202ENST00000370361 IFRD2Q12894 506 aaPredicted RBP17.08■□□□□ 0.32
VMA21-202ENST00000370361 USP39Q53GS9 565 aaKnown RBP17.08■□□□□ 0.32
VMA21-202ENST00000370361 BTBD8Q5XKL5 378 aa17.08■□□□□ 0.32
VMA21-202ENST00000370361 KLHDC10Q6PID8 442 aa17.08■□□□□ 0.32
VMA21-202ENST00000370361 PAQR9Q6ZVX9 377 aa17.08■□□□□ 0.32
VMA21-202ENST00000370361 TRMT11Q7Z4G4 463 aaKnown RBP17.08■□□□□ 0.32
VMA21-202ENST00000370361 TADA2BQ86TJ2 420 aa17.08■□□□□ 0.32
VMA21-202ENST00000370361 FAM186BQ8IYM0 893 aa17.08■□□□□ 0.32
VMA21-202ENST00000370361 CHAMP1Q96JM3 812 aa17.08■□□□□ 0.32
VMA21-202ENST00000370361 HHIPQ96QV1 700 aa17.08■□□□□ 0.32
VMA21-202ENST00000370361 CDK5RAP1Q96SZ6 601 aaKnown RBP17.08■□□□□ 0.32
VMA21-202ENST00000370361 HNRNPABQ99729 332 aaKnown RBP17.08■□□□□ 0.32
VMA21-202ENST00000370361 NT5C1AQ9BXI3 368 aa17.08■□□□□ 0.32
VMA21-202ENST00000370361 NIF3L1Q9GZT8 377 aa17.08■□□□□ 0.32
VMA21-202ENST00000370361 SDCBP2Q9H190 292 aa17.08■□□□□ 0.32
VMA21-202ENST00000370361 TMEM8AQ9HCN3 771 aa17.08■□□□□ 0.32
VMA21-202ENST00000370361 SMPD4Q9NXE4 827 aa17.08■□□□□ 0.32
VMA21-202ENST00000370361 MMP17Q9ULZ9 603 aa17.08■□□□□ 0.32
VMA21-202ENST00000370361 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.08■□□□□ 0.32
VMA21-202ENST00000370361 MYO16Q9Y6X6 1858 aa17.07■□□□□ 0.32
VMA21-202ENST00000370361 MED19A0JLT2 244 aaPredicted RBP17.07■□□□□ 0.32
VMA21-202ENST00000370361 K7EQS6 105 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms