RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 ZSWIM2Q8NEG5 633 aa8.84□□□□□ -0.99
ABCA4-201ENST00000370225 ECSITQ9BQ95 431 aa8.84□□□□□ -0.99
ABCA4-201ENST00000370225 EMILIN2Q9BXX0 1053 aa8.84□□□□□ -0.99
ABCA4-201ENST00000370225 PADI4Q9UM07 663 aa8.84□□□□□ -0.99
ABCA4-201ENST00000370225 USP31Q70CQ4 1352 aa8.84□□□□□ -0.99
ABCA4-201ENST00000370225 MADDQ8WXG6 1647 aa8.84□□□□□ -0.99
ABCA4-201ENST00000370225 GAS2O43903 313 aaKnown RBP8.84□□□□□ -0.99
ABCA4-201ENST00000370225 MAN1A2O60476 641 aa8.84□□□□□ -0.99
ABCA4-201ENST00000370225 RASSF9O75901 435 aa8.84□□□□□ -0.99
ABCA4-201ENST00000370225 ABCB1P08183 1280 aaPredicted RBP8.84□□□□□ -0.99
ABCA4-201ENST00000370225 RPS7P62081 194 aaKnown RBP8.84□□□□□ -0.99
ABCA4-201ENST00000370225 ZNF677Q86XU0 584 aa8.84□□□□□ -0.99
ABCA4-201ENST00000370225 RGL4Q8IZJ4 473 aa8.84□□□□□ -0.99
ABCA4-201ENST00000370225 HMX1Q9NP08 348 aaPredicted RBP8.84□□□□□ -0.99
ABCA4-201ENST00000370225 DSEQ9UL01 958 aa8.84□□□□□ -0.99
ABCA4-201ENST00000370225 DYRK1BQ9Y463 629 aa8.84□□□□□ -0.99
ABCA4-201ENST00000370225 EVPLLA8MZ36 301 aa8.84□□□□□ -0.99
ABCA4-201ENST00000370225 CHUKO15111 745 aa8.84□□□□□ -0.99
ABCA4-201ENST00000370225 WDR47O94967 919 aa8.84□□□□□ -0.99
ABCA4-201ENST00000370225 TCF3P15923 654 aa8.84□□□□□ -0.99
ABCA4-201ENST00000370225 BCAT1P54687 386 aa8.84□□□□□ -0.99
ABCA4-201ENST00000370225 TOMM20Q15388 145 aa8.84□□□□□ -0.99
ABCA4-201ENST00000370225 SLC39A12Q504Y0 691 aa8.84□□□□□ -0.99
ABCA4-201ENST00000370225 OVOS1Q6IE37 1185 aa8.84□□□□□ -0.99
ABCA4-201ENST00000370225 RIN3Q8TB24 985 aa8.84□□□□□ -0.99
ABCA4-201ENST00000370225 RIN2Q8WYP3 895 aaPredicted RBP8.84□□□□□ -0.99
ABCA4-201ENST00000370225 P2RX7Q99572 595 aaKnown RBP8.84□□□□□ -0.99
ABCA4-201ENST00000370225 CLPBQ9H078 707 aa8.84□□□□□ -0.99
ABCA4-201ENST00000370225 SPATS2LQ9NUQ6 558 aaKnown RBP8.84□□□□□ -0.99
ABCA4-201ENST00000370225 RIC8BQ9NVN3 520 aa8.84□□□□□ -0.99
ABCA4-201ENST00000370225 NUDT5Q9UKK9 219 aa8.84□□□□□ -0.99
ABCA4-201ENST00000370225 CCDC130P13994 396 aa8.84□□□□□ -0.99
ABCA4-201ENST00000370225 LHX1P48742 406 aa8.84□□□□□ -0.99
ABCA4-201ENST00000370225 ADIGQ0VDE8 80 aa8.84□□□□□ -0.99
ABCA4-201ENST00000370225 CCDC81Q6ZN84 652 aa8.84□□□□□ -0.99
ABCA4-201ENST00000370225 ADCK1Q86TW2 530 aa8.84□□□□□ -0.99
ABCA4-201ENST00000370225 RDM1Q8NG50 284 aa8.84□□□□□ -0.99
ABCA4-201ENST00000370225 PRPF18Q99633 342 aaKnown RBP8.84□□□□□ -0.99
ABCA4-201ENST00000370225 ASCC2Q9H1I8 757 aaPredicted RBP8.84□□□□□ -0.99
ABCA4-201ENST00000370225 EXOSC4Q9NPD3 245 aaKnown RBP8.84□□□□□ -0.99
ABCA4-201ENST00000370225 PDGFCQ9NRA1 345 aa8.84□□□□□ -0.99
ABCA4-201ENST00000370225 NFKBIL1Q9UBC1 381 aaPredicted RBP8.84□□□□□ -0.99
ABCA4-201ENST00000370225 RPS6KB2Q9UBS0 482 aa8.84□□□□□ -0.99
ABCA4-201ENST00000370225 ZNF229Q9UJW7 825 aa8.84□□□□□ -0.99
ABCA4-201ENST00000370225 SNCAIPQ9Y6H5 919 aa8.84□□□□□ -0.99
ABCA4-201ENST00000370225 FDPSP14324 419 aaKnown RBP8.84□□□□□ -1
ABCA4-201ENST00000370225 CNTN1Q12860 1018 aa8.84□□□□□ -1
ABCA4-201ENST00000370225 SFSWAPQ12872 951 aaKnown RBP8.84□□□□□ -1
ABCA4-201ENST00000370225 OVGP1Q12889 678 aa8.84□□□□□ -1
ABCA4-201ENST00000370225 C16orf89Q6UX73 402 aa8.84□□□□□ -1
ABCA4-201ENST00000370225 C3orf67Q6ZVT6 689 aa8.84□□□□□ -1
ABCA4-201ENST00000370225 PLD3Q8IV08 490 aa8.84□□□□□ -1
ABCA4-201ENST00000370225 MYO1HQ8N1T3 1032 aa8.84□□□□□ -1
ABCA4-201ENST00000370225 VPS37AQ8NEZ2 397 aa8.84□□□□□ -1
ABCA4-201ENST00000370225 EME1Q96AY2 570 aa8.84□□□□□ -1
ABCA4-201ENST00000370225 UTP6Q9NYH9 597 aaKnown RBP8.84□□□□□ -1
ABCA4-201ENST00000370225 USP18Q9UMW8 372 aa8.84□□□□□ -1
ABCA4-201ENST00000370225 HPS5Q9UPZ3 1129 aa8.84□□□□□ -1
ABCA4-201ENST00000370225 MANSC4A6NHS7 340 aaPredicted RBP8.83□□□□□ -1
ABCA4-201ENST00000370225 PLA2G6O60733 806 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 SH3BGRLO75368 114 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 KATNA1O75449 491 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 VDRP11473 427 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 GRK3P35626 688 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 COILP38432 576 aaPredicted RBP8.83□□□□□ -1
ABCA4-201ENST00000370225 FNTAP49354 379 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 FSCN1Q16658 493 aaKnown RBP8.83□□□□□ -1
ABCA4-201ENST00000370225 UNC45BQ8IWX7 931 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 PCYOX1LQ8NBM8 494 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 ANKRD49Q8WVL7 239 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 TUBGCP3Q96CW5 907 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 TMEM176AQ96HP8 235 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 MYCBPQ99417 103 aaPredicted RBP8.83□□□□□ -1
ABCA4-201ENST00000370225 MANSC1Q9H8J5 431 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 ZFYVE1Q9HBF4 777 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 SMG5Q9UPR3 1016 aaKnown RBP8.83□□□□□ -1
ABCA4-201ENST00000370225 MYPNQ86TC9 1320 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 CPS1P31327 1500 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 GYPCP04921 128 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 GSNP06396 782 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 HALP42357 657 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 CNTN2Q02246 1040 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 MRNIPQ6NTE8 343 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 UBXN6Q9BZV1 441 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 AP4E1Q9UPM8 1137 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 PIK3C2BO00750 1634 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 TRIM49D1C9J1S8 452 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 DYRK3O43781 588 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 SNRPFP62306 86 aaKnown RBP8.83□□□□□ -1
ABCA4-201ENST00000370225 DMTNQ08495 405 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 CYP51A1Q16850 503 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 KRT78Q8N1N4 520 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 FHDC1Q9C0D6 1143 aaPredicted RBP8.83□□□□□ -1
ABCA4-201ENST00000370225 AAR2Q9Y312 384 aaKnown RBP8.83□□□□□ -1
ABCA4-201ENST00000370225 PPP1R3GB7ZBB8 358 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 JCHAINP01591 159 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 TMEM253P0C7T8 217 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 MSH3P20585 1137 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 OR1E1P30953 314 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 CCL23P55773 120 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms