RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 MYH11P35749 1972 aa10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 ETFBP38117 255 aa10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 ROR1Q01973 937 aa10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 TAF5Q15542 800 aa10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 FASTKD1Q53R41 847 aaKnown RBP10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 FOXR2Q6PJQ5 311 aa10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 TSHZ1Q6ZSZ6 1077 aa10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 EEPD1Q7L9B9 569 aa10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 ARPINQ7Z6K5 226 aa10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 ALLCQ8N6M5 410 aa10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 ZNF606Q8WXB4 792 aa10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 HSPBAP1Q96EW2 488 aa10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 APOPT1Q96IL0 206 aa10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 RNPEPQ9H4A4 650 aa10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 SUDS3Q9H7L9 328 aaPredicted RBP10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 XAB2Q9HCS7 855 aaKnown RBP10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 PNPOQ9NVS9 261 aa10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 SLC17A6Q9P2U8 582 aa10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 AGO2Q9UKV8 859 aaKnown RBP10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 ASB3Q9Y575 518 aa10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 PSMD10O75832 226 aa10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 RGS7P49802 495 aa10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 FLOT2Q14254 428 aa10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 SLC27A3Q5K4L6 730 aa10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 C6orf52Q5T4I8 152 aa10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 CCNYL1Q8N7R7 359 aa10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 FAM156AQ8NDB6 213 aa10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 DIS3LQ8TF46 1054 aaKnown RBP10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 LENG1Q96BZ8 264 aaPredicted RBP10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 MOCOSQ96EN8 888 aa10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 TIPINQ9BVW5 301 aa10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 NUF2Q9BZD4 464 aa10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 DHX35Q9H5Z1 703 aaKnown RBP10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 HERC5Q9UII4 1024 aaKnown RBP10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 CICQ96RK0 1608 aaPredicted RBP10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 UBE4BO95155 1302 aa10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 CYP3A7-CYP3A51PA0A087WV96 503 aa10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 PSTPIP1O43586 416 aa10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 CYP1A1P04798 512 aaPredicted RBP10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 CHN2P52757 468 aa10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 ITGA9Q13797 1035 aa10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 NLRP7Q8WX94 980 aa10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 C20orf96Q9NUD7 363 aaPredicted RBP10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 COMMD3-BMI1R4GMX3 469 aa10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 A0A0B4J269 797 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 POLRMTO00411 1230 aaKnown RBP10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 ABLIM1O14639 778 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 TP73O15350 636 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 TYROBPO43914 113 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 TM7SF2O76062 418 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 TMEM63AO94886 807 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 ITGA2BP08514 1039 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 TMEM191BP0C7N4 346 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 GEN1Q17RS7 908 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 FAM102AQ5T9C2 384 aaPredicted RBP10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 GRAMD4Q6IC98 578 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 IGDCC3Q8IVU1 814 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 CERS5Q8N5B7 392 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 C12orf50Q8NA57 414 aaPredicted RBP10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 IL31RAQ8NI17 732 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 UBA3Q8TBC4 463 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 CPT1BQ92523 772 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 MKL1Q969V6 931 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 DMAC2Q9NW81 257 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 BTBD7Q9P203 1132 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 KANSL3Q9P2N6 904 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 COL4A1P02462 1669 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 CLUHO75153 1309 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 NFIBO00712 420 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 TMCC1O94876 653 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 OSBPP22059 807 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 EEF1B2P24534 225 aaKnown RBP10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 GCAP28676 217 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 PSMD7P51665 324 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 CCNG1P51959 295 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 BCAR1P56945 870 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 ATP1A4Q13733 1029 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 RARS2Q5T160 578 aaKnown RBP10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 WDR78Q5VTH9 848 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 TTC39BQ5VTQ0 682 aaPredicted RBP10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 AMIGO2Q86SJ2 522 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 TNS4Q8IZW8 715 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 GATA6Q92908 595 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 NR1H4Q96RI1 486 aaPredicted RBP10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 CDRT15Q96T59 188 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 PAIP2BQ9ULR5 123 aaKnown RBP10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 ARHGAP10A1A4S6 786 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 NDC80O14777 642 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 GIPC1O14908 333 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 RPS6KA4O75676 772 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 UQCRBP14927 111 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 NLRP11P59045 1033 aaKnown RBP10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 CYP24A1Q07973 514 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 CUL2Q13617 745 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 UGCGQ16739 394 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 ITPRIPL1Q6GPH6 555 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 C16orf87Q6PH81 154 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 SLC26A11Q86WA9 606 aa10.81□□□□□ -0.68
PRPF38B-201ENST00000370021 UNC5BQ8IZJ1 945 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms