RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 MCM3P25205 808 aa17.61■□□□□ 0.41
PHGDH-202ENST00000369409 PCK1P35558 622 aa17.61■□□□□ 0.41
PHGDH-202ENST00000369409 MRPS5P82675 430 aaKnown RBP17.61■□□□□ 0.41
PHGDH-202ENST00000369409 EFHC1Q5JVL4 640 aa17.61■□□□□ 0.41
PHGDH-202ENST00000369409 FUT10Q6P4F1 479 aa17.61■□□□□ 0.41
PHGDH-202ENST00000369409 TMEM173Q86WV6 379 aaPredicted RBP17.61■□□□□ 0.41
PHGDH-202ENST00000369409 CEP57Q86XR8 500 aa17.61■□□□□ 0.41
PHGDH-202ENST00000369409 RCOR2Q8IZ40 523 aa17.61■□□□□ 0.41
PHGDH-202ENST00000369409 FAM172AQ8WUF8 416 aa17.61■□□□□ 0.41
PHGDH-202ENST00000369409 RAPGEF5Q92565 580 aa17.61■□□□□ 0.41
PHGDH-202ENST00000369409 RUBCNQ92622 972 aa17.61■□□□□ 0.41
PHGDH-202ENST00000369409 B3GALT6Q96L58 329 aa17.61■□□□□ 0.41
PHGDH-202ENST00000369409 ULBP1Q9BZM6 244 aa17.61■□□□□ 0.41
PHGDH-202ENST00000369409 CSNK1G1Q9HCP0 422 aa17.61■□□□□ 0.41
PHGDH-202ENST00000369409 HHLA1C9JL84 531 aa17.6■□□□□ 0.41
PHGDH-202ENST00000369409 KIAA0355O15063 1070 aa17.6■□□□□ 0.41
PHGDH-202ENST00000369409 HSF2BPO75031 334 aa17.6■□□□□ 0.41
PHGDH-202ENST00000369409 RAG1P15918 1043 aa17.6■□□□□ 0.41
PHGDH-202ENST00000369409 CETN2P41208 172 aa17.6■□□□□ 0.41
PHGDH-202ENST00000369409 PPP2R5EQ16537 467 aa17.6■□□□□ 0.41
PHGDH-202ENST00000369409 KCTD19Q17RG1 926 aaPredicted RBP17.6■□□□□ 0.41
PHGDH-202ENST00000369409 SLC39A12Q504Y0 691 aa17.6■□□□□ 0.41
PHGDH-202ENST00000369409 TMCO3Q6UWJ1 677 aa17.6■□□□□ 0.41
PHGDH-202ENST00000369409 SPOCD1Q6ZMY3 1216 aa17.6■□□□□ 0.41
PHGDH-202ENST00000369409 SPATA2LQ8IUW3 424 aaPredicted RBP17.6■□□□□ 0.41
PHGDH-202ENST00000369409 GSPT2Q8IYD1 628 aaKnown RBP17.6■□□□□ 0.41
PHGDH-202ENST00000369409 DMAP1Q9NPF5 467 aaPredicted RBP17.6■□□□□ 0.41
PHGDH-202ENST00000369409 KIAA1671Q9BY89 1806 aa17.6■□□□□ 0.41
PHGDH-202ENST00000369409 ESYT3A0FGR9 886 aa17.59■□□□□ 0.41
PHGDH-202ENST00000369409 TTI1O43156 1089 aa17.59■□□□□ 0.41
PHGDH-202ENST00000369409 ERLIN1O75477 346 aa17.59■□□□□ 0.41
PHGDH-202ENST00000369409 DAB1O75553 588 aa17.59■□□□□ 0.41
PHGDH-202ENST00000369409 DGKIO75912 1065 aa17.59■□□□□ 0.41
PHGDH-202ENST00000369409 TRUB2O95900 331 aaKnown RBP17.59■□□□□ 0.41
PHGDH-202ENST00000369409 DESP17661 470 aa17.59■□□□□ 0.41
PHGDH-202ENST00000369409 TFE3P19532 575 aaPredicted RBP17.59■□□□□ 0.41
PHGDH-202ENST00000369409 PTPN9P43378 593 aa17.59■□□□□ 0.41
PHGDH-202ENST00000369409 GUCY2DQ02846 1103 aa17.59■□□□□ 0.41
PHGDH-202ENST00000369409 KLF1Q13351 362 aaPredicted RBP17.59■□□□□ 0.41
PHGDH-202ENST00000369409 RAB41Q5JT25 222 aa17.59■□□□□ 0.41
PHGDH-202ENST00000369409 C4orf50Q6ZRC1 276 aa17.59■□□□□ 0.41
PHGDH-202ENST00000369409 ARCQ7LC44 396 aa17.59■□□□□ 0.41
PHGDH-202ENST00000369409 CCDC26Q8TAB7 109 aa17.59■□□□□ 0.41
PHGDH-202ENST00000369409 BCL7CQ8WUZ0 217 aaPredicted RBP17.59■□□□□ 0.41
PHGDH-202ENST00000369409 MAIP1Q8WWC4 291 aa17.59■□□□□ 0.41
PHGDH-202ENST00000369409 HSPH1Q92598 858 aa17.59■□□□□ 0.41
PHGDH-202ENST00000369409 MAGOHBQ96A72 148 aaKnown RBP17.59■□□□□ 0.41
PHGDH-202ENST00000369409 ZCWPW1Q9H0M4 648 aa17.59■□□□□ 0.41
PHGDH-202ENST00000369409 ABHD14A-ACY1A0A1B0GW23 586 aa17.58■□□□□ 0.41
PHGDH-202ENST00000369409 FBXO21O94952 628 aa17.58■□□□□ 0.41
PHGDH-202ENST00000369409 MYBL2P10244 700 aa17.58■□□□□ 0.41
PHGDH-202ENST00000369409 KRT10P13645 584 aa17.58■□□□□ 0.41
PHGDH-202ENST00000369409 CHRNA3P32297 505 aa17.58■□□□□ 0.41
PHGDH-202ENST00000369409 DEFB103AP81534 67 aa17.58■□□□□ 0.41
PHGDH-202ENST00000369409 CYP1B1Q16678 543 aa17.58■□□□□ 0.41
PHGDH-202ENST00000369409 KAZNQ674X7 775 aa17.58■□□□□ 0.41
PHGDH-202ENST00000369409 ZNF280DQ6N043 979 aa17.58■□□□□ 0.41
PHGDH-202ENST00000369409 TTC27Q6P3X3 843 aa17.58■□□□□ 0.41
PHGDH-202ENST00000369409 CYP4V2Q6ZWL3 525 aaPredicted RBP17.58■□□□□ 0.41
PHGDH-202ENST00000369409 TMCO2Q7Z6W1 182 aaPredicted RBP17.58■□□□□ 0.41
PHGDH-202ENST00000369409 DEFB106AQ8N104 65 aa17.58■□□□□ 0.41
PHGDH-202ENST00000369409 C1orf54Q8WWF1 131 aa17.58■□□□□ 0.41
PHGDH-202ENST00000369409 ADAM33Q9BZ11 813 aa17.58■□□□□ 0.41
PHGDH-202ENST00000369409 EPB41L5Q9HCM4 733 aa17.58■□□□□ 0.41
PHGDH-202ENST00000369409 ARFGAP3Q9NP61 516 aa17.58■□□□□ 0.41
PHGDH-202ENST00000369409 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.58■□□□□ 0.41
PHGDH-202ENST00000369409 ZNF446Q9NWS9 450 aa17.58■□□□□ 0.41
PHGDH-202ENST00000369409 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.58■□□□□ 0.41
PHGDH-202ENST00000369409 hCG_1818297A0A087WSY0 165 aa17.58■□□□□ 0.4
PHGDH-202ENST00000369409 PRPSAP2O60256 369 aa17.58■□□□□ 0.4
PHGDH-202ENST00000369409 FGFR3P22607 806 aa17.58■□□□□ 0.4
PHGDH-202ENST00000369409 CDKN2BP42772 138 aa17.58■□□□□ 0.4
PHGDH-202ENST00000369409 HDAC4P56524 1084 aa17.58■□□□□ 0.4
PHGDH-202ENST00000369409 DAOAP59103 153 aa17.58■□□□□ 0.4
PHGDH-202ENST00000369409 COPS2P61201 443 aa17.58■□□□□ 0.4
PHGDH-202ENST00000369409 DR1Q01658 176 aa17.58■□□□□ 0.4
PHGDH-202ENST00000369409 CTXN3Q4LDR2 81 aa17.58■□□□□ 0.4
PHGDH-202ENST00000369409 FAM117BQ6P1L5 589 aa17.58■□□□□ 0.4
PHGDH-202ENST00000369409 SCYL2Q6P3W7 929 aa17.58■□□□□ 0.4
PHGDH-202ENST00000369409 HFE2Q6ZVN8 426 aa17.58■□□□□ 0.4
PHGDH-202ENST00000369409 MAATS1Q7Z4T9 603 aa17.58■□□□□ 0.4
PHGDH-202ENST00000369409 DCP1BQ8IZD4 617 aaKnown RBP17.58■□□□□ 0.4
PHGDH-202ENST00000369409 C12orf50Q8NA57 414 aaPredicted RBP17.58■□□□□ 0.4
PHGDH-202ENST00000369409 ATG4AQ8WYN0 398 aa17.58■□□□□ 0.4
PHGDH-202ENST00000369409 C11orf84Q9BUA3 381 aaPredicted RBP17.58■□□□□ 0.4
PHGDH-202ENST00000369409 DDX23Q9BUQ8 820 aaKnown RBP17.58■□□□□ 0.4
PHGDH-202ENST00000369409 CNGB3Q9NQW8 809 aa17.58■□□□□ 0.4
PHGDH-202ENST00000369409 ABI2Q9NYB9 513 aaPredicted RBP17.58■□□□□ 0.4
PHGDH-202ENST00000369409 C3orf70A6NLC5 250 aaPredicted RBP17.57■□□□□ 0.4
PHGDH-202ENST00000369409 AMHP03971 560 aa17.57■□□□□ 0.4
PHGDH-202ENST00000369409 USP17L7P0C7H9 530 aa17.57■□□□□ 0.4
PHGDH-202ENST00000369409 ACRP10323 421 aa17.57■□□□□ 0.4
PHGDH-202ENST00000369409 CYP2F1P24903 491 aa17.57■□□□□ 0.4
PHGDH-202ENST00000369409 PTPN7P35236 360 aa17.57■□□□□ 0.4
PHGDH-202ENST00000369409 MATKP42679 507 aa17.57■□□□□ 0.4
PHGDH-202ENST00000369409 YWHAZP63104 245 aaKnown RBP17.57■□□□□ 0.4
PHGDH-202ENST00000369409 ADCY2Q08462 1091 aa17.57■□□□□ 0.4
PHGDH-202ENST00000369409 ELAVL2Q12926 359 aaKnown RBP17.57■□□□□ 0.4
PHGDH-202ENST00000369409 TFDP3Q5H9I0 405 aa17.57■□□□□ 0.4
PHGDH-202ENST00000369409 MFSD5Q6N075 450 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms