RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 HEY2Q9UBP5 337 aa18.76■□□□□ 0.59
SNX27-202ENST00000368841 TSC22D4Q9Y3Q8 395 aa18.76■□□□□ 0.59
SNX27-202ENST00000368841 SNX13Q9Y5W8 968 aa18.76■□□□□ 0.59
SNX27-202ENST00000368841 PLA2G6O60733 806 aa18.76■□□□□ 0.59
SNX27-202ENST00000368841 TRAF2Q12933 501 aa18.76■□□□□ 0.59
SNX27-202ENST00000368841 BMPR2Q13873 1038 aa18.76■□□□□ 0.59
SNX27-202ENST00000368841 NFYCQ13952 458 aa18.76■□□□□ 0.59
SNX27-202ENST00000368841 DAB2IPQ5VWQ8 1189 aa18.76■□□□□ 0.59
SNX27-202ENST00000368841 UGT3A1Q6NUS8 523 aa18.76■□□□□ 0.59
SNX27-202ENST00000368841 LRIG3Q6UXM1 1119 aa18.76■□□□□ 0.59
SNX27-202ENST00000368841 STRA8Q7Z7C7 330 aa18.76■□□□□ 0.59
SNX27-202ENST00000368841 LRRC34Q8IZ02 419 aa18.76■□□□□ 0.59
SNX27-202ENST00000368841 TC2NQ8N9U0 490 aa18.76■□□□□ 0.59
SNX27-202ENST00000368841 PHF21BQ96EK2 531 aa18.76■□□□□ 0.59
SNX27-202ENST00000368841 SERAC1Q96JX3 654 aa18.76■□□□□ 0.59
SNX27-202ENST00000368841 ACAT1P24752 427 aaKnown RBP18.76■□□□□ 0.59
SNX27-202ENST00000368841 PON1P27169 355 aa18.76■□□□□ 0.59
SNX27-202ENST00000368841 HSD17B3P37058 310 aa18.76■□□□□ 0.59
SNX27-202ENST00000368841 TKFCQ3LXA3 575 aa18.76■□□□□ 0.59
SNX27-202ENST00000368841 DENND1BQ6P3S1 775 aa18.76■□□□□ 0.59
SNX27-202ENST00000368841 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.76■□□□□ 0.59
SNX27-202ENST00000368841 TNIP2Q8NFZ5 429 aa18.76■□□□□ 0.59
SNX27-202ENST00000368841 TPCN2Q8NHX9 752 aa18.76■□□□□ 0.59
SNX27-202ENST00000368841 ADAM32Q8TC27 787 aa18.76■□□□□ 0.59
SNX27-202ENST00000368841 CATSPER2Q96P56 530 aa18.76■□□□□ 0.59
SNX27-202ENST00000368841 COPAP53621 1224 aa18.76■□□□□ 0.59
SNX27-202ENST00000368841 TRPC4APQ8TEL6 797 aa18.76■□□□□ 0.59
SNX27-202ENST00000368841 CCSER1Q9C0I3 900 aa18.76■□□□□ 0.59
SNX27-202ENST00000368841 PAPOLBQ9NRJ5 636 aaKnown RBP18.76■□□□□ 0.59
SNX27-202ENST00000368841 NDOR1Q9UHB4 597 aa18.76■□□□□ 0.59
SNX27-202ENST00000368841 ARHGAP31Q2M1Z3 1444 aa18.76■□□□□ 0.59
SNX27-202ENST00000368841 PQBP1O60828 265 aaKnown RBP18.75■□□□□ 0.59
SNX27-202ENST00000368841 ZCCHC18P0CG32 403 aa18.75■□□□□ 0.59
SNX27-202ENST00000368841 STAG3L1P0CL83 205 aa18.75■□□□□ 0.59
SNX27-202ENST00000368841 MAPK10P53779 464 aa18.75■□□□□ 0.59
SNX27-202ENST00000368841 OR8H2Q8N162 312 aa18.75■□□□□ 0.59
SNX27-202ENST00000368841 EXD1Q8NHP7 514 aa18.75■□□□□ 0.59
SNX27-202ENST00000368841 SNTG2Q9NY99 539 aa18.75■□□□□ 0.59
SNX27-202ENST00000368841 COPG1Q9Y678 874 aaKnown RBP18.75■□□□□ 0.59
SNX27-202ENST00000368841 CAMTA2O94983 1202 aa18.75■□□□□ 0.59
SNX27-202ENST00000368841 CES3Q6UWW8 571 aa18.75■□□□□ 0.59
SNX27-202ENST00000368841 AGPAT3Q9NRZ7 376 aa18.75■□□□□ 0.59
SNX27-202ENST00000368841 RCAN1P53805 252 aa18.75■□□□□ 0.59
SNX27-202ENST00000368841 SREBF2Q12772 1141 aa18.75■□□□□ 0.59
SNX27-202ENST00000368841 SLFN11Q7Z7L1 901 aa18.75■□□□□ 0.59
SNX27-202ENST00000368841 VPS37AQ8NEZ2 397 aa18.75■□□□□ 0.59
SNX27-202ENST00000368841 CCDC3Q9BQI4 270 aa18.75■□□□□ 0.59
SNX27-202ENST00000368841 DYRK1BQ9Y463 629 aa18.75■□□□□ 0.59
SNX27-202ENST00000368841 MORC2Q9Y6X9 1032 aaPredicted RBP18.75■□□□□ 0.59
SNX27-202ENST00000368841 FDX1P10109 184 aa18.75■□□□□ 0.59
SNX27-202ENST00000368841 PSMA4P25789 261 aaKnown RBP18.75■□□□□ 0.59
SNX27-202ENST00000368841 CDC42EP1Q00587 391 aa18.75■□□□□ 0.59
SNX27-202ENST00000368841 AGAP9Q5VTM2 703 aa18.75■□□□□ 0.59
SNX27-202ENST00000368841 SH3GL3Q99963 347 aa18.75■□□□□ 0.59
SNX27-202ENST00000368841 SMPD4Q9NXE4 827 aa18.75■□□□□ 0.59
SNX27-202ENST00000368841 AGGF1Q8N302 714 aaeCLIP18.75■□□□□ 0.59
SNX27-202ENST00000368841 CDY2AQ9Y6F7 541 aa18.75■□□□□ 0.59
SNX27-202ENST00000368841 CDY1Q9Y6F8 540 aa18.75■□□□□ 0.59
SNX27-202ENST00000368841 RGL2O15211 777 aa18.75■□□□□ 0.59
SNX27-202ENST00000368841 SYNCRIPO60506 623 aaKnown RBP18.75■□□□□ 0.59
SNX27-202ENST00000368841 ATP12AP54707 1039 aa18.75■□□□□ 0.59
SNX27-202ENST00000368841 USP39Q53GS9 565 aaKnown RBP18.75■□□□□ 0.59
SNX27-202ENST00000368841 ALKBH2Q6NS38 261 aa18.75■□□□□ 0.59
SNX27-202ENST00000368841 LPCAT1Q8NF37 534 aa18.75■□□□□ 0.59
SNX27-202ENST00000368841 TMC2Q8TDI7 906 aa18.75■□□□□ 0.59
SNX27-202ENST00000368841 OSMRQ99650 979 aa18.75■□□□□ 0.59
SNX27-202ENST00000368841 RBBP8Q99708 897 aa18.75■□□□□ 0.59
SNX27-202ENST00000368841 FOXN3O00409 490 aaPredicted RBP18.74■□□□□ 0.59
SNX27-202ENST00000368841 TDRD5Q8NAT2 981 aaKnown RBP18.74■□□□□ 0.59
SNX27-202ENST00000368841 GLT1D1Q96MS3 346 aa18.74■□□□□ 0.59
SNX27-202ENST00000368841 MKL2Q9ULH7 1088 aa18.74■□□□□ 0.59
SNX27-202ENST00000368841 GOLGA8TH3BQL2 631 aa18.74■□□□□ 0.59
SNX27-202ENST00000368841 BAIAP3O94812 1187 aa18.74■□□□□ 0.59
SNX27-202ENST00000368841 SCNN1BP51168 640 aa18.74■□□□□ 0.59
SNX27-202ENST00000368841 RHOAP61586 193 aa18.74■□□□□ 0.59
SNX27-202ENST00000368841 TRMT11Q7Z4G4 463 aaKnown RBP18.74■□□□□ 0.59
SNX27-202ENST00000368841 MYO1HQ8N1T3 1032 aa18.74■□□□□ 0.59
SNX27-202ENST00000368841 USP6NLQ92738 828 aa18.74■□□□□ 0.59
SNX27-202ENST00000368841 SENP6Q9GZR1 1112 aaPredicted RBP18.74■□□□□ 0.59
SNX27-202ENST00000368841 RHOCP08134 193 aa18.74■□□□□ 0.59
SNX27-202ENST00000368841 GRK2P25098 689 aa18.74■□□□□ 0.59
SNX27-202ENST00000368841 YWHAZP63104 245 aaKnown RBP18.74■□□□□ 0.59
SNX27-202ENST00000368841 LAMB3Q13751 1172 aa18.74■□□□□ 0.59
SNX27-202ENST00000368841 LUZP2Q86TE4 346 aa18.74■□□□□ 0.59
SNX27-202ENST00000368841 CBWD1Q9BRT8 395 aa18.74■□□□□ 0.59
SNX27-202ENST00000368841 ERP44Q9BS26 406 aa18.74■□□□□ 0.59
SNX27-202ENST00000368841 TBC1D23Q9NUY8 699 aa18.74■□□□□ 0.59
SNX27-202ENST00000368841 ZMYM5Q9UJ78 669 aa18.74■□□□□ 0.59
SNX27-202ENST00000368841 SLC9A8Q9Y2E8 581 aa18.74■□□□□ 0.59
SNX27-202ENST00000368841 LRRC7Q96NW7 1537 aa18.74■□□□□ 0.59
SNX27-202ENST00000368841 EIF3DO15371 548 aaKnown RBP eCLIP18.74■□□□□ 0.59
SNX27-202ENST00000368841 BGNP21810 368 aa18.74■□□□□ 0.59
SNX27-202ENST00000368841 KLC1Q07866 573 aa18.74■□□□□ 0.59
SNX27-202ENST00000368841 POU6F1Q14863 301 aa18.74■□□□□ 0.59
SNX27-202ENST00000368841 POTEAQ6S8J7 498 aa18.74■□□□□ 0.59
SNX27-202ENST00000368841 SLC20A1Q8WUM9 679 aa18.74■□□□□ 0.59
SNX27-202ENST00000368841 TBKBP1A7MCY6 615 aa18.74■□□□□ 0.59
SNX27-202ENST00000368841 PPP1R3GB7ZBB8 358 aa18.74■□□□□ 0.59
SNX27-202ENST00000368841 KIAA0391O15091 583 aaKnown RBP18.74■□□□□ 0.59
SNX27-202ENST00000368841 GEMP55040 296 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms