RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 PRKCIP41743 596 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 STAT1P42224 750 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 GPC3P51654 580 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 ZNF143P52747 638 aaPredicted RBP9.34□□□□□ -0.91
TPM3-213ENST00000368545 AP3M2P53677 418 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 ETF1P62495 437 aaKnown RBP9.34□□□□□ -0.91
TPM3-213ENST00000368545 POU5F1Q01860 360 aaKnown RBP9.34□□□□□ -0.91
TPM3-213ENST00000368545 KLHL30Q0D2K2 578 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 PIN1Q13526 163 aaPredicted RBP9.34□□□□□ -0.91
TPM3-213ENST00000368545 MAP7Q14244 749 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 SEPT7Q16181 437 aaKnown RBP9.34□□□□□ -0.91
TPM3-213ENST00000368545 KYAT1Q16773 422 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 ZNF568Q3ZCX4 644 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 ZNF468Q5VIY5 522 aaPredicted RBP9.34□□□□□ -0.91
TPM3-213ENST00000368545 IQCEQ6IPM2 695 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 BRSK2Q8IWQ3 736 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 LRRN4CLQ8ND94 238 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 PPP1R14AQ96A00 147 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 SCLT1Q96NL6 688 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 TGS1Q96RS0 853 aaKnown RBP9.34□□□□□ -0.91
TPM3-213ENST00000368545 CGRRF1Q99675 332 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 TCHPQ9BT92 498 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 HAPLN2Q9GZV7 340 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 HAUS4Q9H6D7 363 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 SOX17Q9H6I2 414 aaPredicted RBP9.34□□□□□ -0.91
TPM3-213ENST00000368545 COMMD10Q9Y6G5 202 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 COL4A4P53420 1690 aaPredicted RBP9.34□□□□□ -0.91
TPM3-213ENST00000368545 RALGAPA2Q2PPJ7 1873 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 A0A087WZ62 844 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 RBAK-RBAKDNI3L0D1 243 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 ABLIM1O14639 778 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 PRODHO43272 600 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 KRT86O43790 486 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 SIN3BO75182 1162 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 VTNP04004 478 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 CYP11A1P05108 521 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 C6orf222P0C671 652 aaPredicted RBP9.34□□□□□ -0.91
TPM3-213ENST00000368545 PABPC1P11940 636 aaKnown RBP9.34□□□□□ -0.91
TPM3-213ENST00000368545 MAOBP27338 520 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 ACOT2P49753 483 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 SUMO1P63165 101 aaKnown RBP9.34□□□□□ -0.91
TPM3-213ENST00000368545 PURAQ00577 322 aaKnown RBP9.34□□□□□ -0.91
TPM3-213ENST00000368545 APBA1Q02410 837 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 ZNF460Q14592 562 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 ST3GAL2Q16842 350 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 BBS9Q3SYG4 887 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 TXNDC11Q6PKC3 985 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 CRELD2Q6UXH1 353 aaPredicted RBP9.34□□□□□ -0.91
TPM3-213ENST00000368545 KIAA1328Q86T90 577 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 VPS36Q86VN1 386 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 ZNF227Q86WZ6 799 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 HERC6Q8IVU3 1022 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 ZBTB45Q96K62 511 aaPredicted RBP9.34□□□□□ -0.91
TPM3-213ENST00000368545 FDXACB1Q9BRP7 624 aaPredicted RBP9.34□□□□□ -0.91
TPM3-213ENST00000368545 YIPF4Q9BSR8 244 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 PTPRHQ9HD43 1115 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 SETD4Q9NVD3 440 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 RAB20Q9NX57 234 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 DNAJC12Q9UKB3 198 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 TNPO3Q9Y5L0 923 aaKnown RBP9.34□□□□□ -0.91
TPM3-213ENST00000368545 TRIP12Q14669 1992 aaPredicted RBP9.33□□□□□ -0.92
TPM3-213ENST00000368545 ATP8B3O60423 1300 aa9.33□□□□□ -0.92
TPM3-213ENST00000368545 C9IYK1 514 aa9.33□□□□□ -0.92
TPM3-213ENST00000368545 TBX1O43435 398 aa9.33□□□□□ -0.92
TPM3-213ENST00000368545 KIF5CO60282 957 aa9.33□□□□□ -0.92
TPM3-213ENST00000368545 FAM189A1O60320 539 aa9.33□□□□□ -0.92
TPM3-213ENST00000368545 GFPT2O94808 682 aa9.33□□□□□ -0.92
TPM3-213ENST00000368545 ERLIN2O94905 339 aa9.33□□□□□ -0.92
TPM3-213ENST00000368545 PLEKP08567 350 aaPredicted RBP9.33□□□□□ -0.92
TPM3-213ENST00000368545 CYP2C9P11712 490 aa9.33□□□□□ -0.92
TPM3-213ENST00000368545 TNNI1P19237 187 aa9.33□□□□□ -0.92
TPM3-213ENST00000368545 HOXC8P31273 242 aa9.33□□□□□ -0.92
TPM3-213ENST00000368545 VAV2P52735 878 aa9.33□□□□□ -0.92
TPM3-213ENST00000368545 TERF1P54274 439 aa9.33□□□□□ -0.92
TPM3-213ENST00000368545 MFAP3P55082 362 aa9.33□□□□□ -0.92
TPM3-213ENST00000368545 ADAM17P78536 824 aa9.33□□□□□ -0.92
TPM3-213ENST00000368545 ZXDAP98168 799 aa9.33□□□□□ -0.92
TPM3-213ENST00000368545 BEX3Q00994 111 aa9.33□□□□□ -0.92
TPM3-213ENST00000368545 DRAP1Q14919 205 aaPredicted RBP9.33□□□□□ -0.92
TPM3-213ENST00000368545 POU4F3Q15319 338 aa9.33□□□□□ -0.92
TPM3-213ENST00000368545 SMAD2Q15796 467 aaKnown RBP9.33□□□□□ -0.92
TPM3-213ENST00000368545 ASTE1Q2TB18 679 aaPredicted RBP9.33□□□□□ -0.92
TPM3-213ENST00000368545 ZACNQ401N2 412 aa9.33□□□□□ -0.92
TPM3-213ENST00000368545 RNF219Q5W0B1 726 aaPredicted RBP9.33□□□□□ -0.92
TPM3-213ENST00000368545 C15orf39Q6ZRI6 1047 aa9.33□□□□□ -0.92
TPM3-213ENST00000368545 SV2AQ7L0J3 742 aa9.33□□□□□ -0.92
TPM3-213ENST00000368545 ENOSF1Q7L5Y1 443 aa9.33□□□□□ -0.92
TPM3-213ENST00000368545 FGD2Q7Z6J4 655 aa9.33□□□□□ -0.92
TPM3-213ENST00000368545 KIAA0319LQ8IZA0 1049 aa9.33□□□□□ -0.92
TPM3-213ENST00000368545 ARNTL2Q8WYA1 636 aa9.33□□□□□ -0.92
TPM3-213ENST00000368545 ZBTB10Q96DT7 871 aa9.33□□□□□ -0.92
TPM3-213ENST00000368545 MRPL38Q96DV4 380 aaKnown RBP9.33□□□□□ -0.92
TPM3-213ENST00000368545 MTG1Q9BT17 334 aaPredicted RBP9.33□□□□□ -0.92
TPM3-213ENST00000368545 IFIH1Q9BYX4 1025 aaKnown RBP9.33□□□□□ -0.92
TPM3-213ENST00000368545 LZTFL1Q9NQ48 299 aa9.33□□□□□ -0.92
TPM3-213ENST00000368545 ADAM30Q9UKF2 790 aa9.33□□□□□ -0.92
TPM3-213ENST00000368545 COL4A6Q14031 1691 aa9.33□□□□□ -0.92
TPM3-213ENST00000368545 C17orf102A2RUQ5 167 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 AVPP01185 164 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 CAPNS1P04632 268 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms