RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 GBP2P32456 591 aaPredicted RBP14.63□□□□□ -0.07
TPM3-211ENST00000368531 PRKCIP41743 596 aa14.63□□□□□ -0.07
TPM3-211ENST00000368531 EPHA5P54756 1037 aa14.63□□□□□ -0.07
TPM3-211ENST00000368531 PDCLQ13371 301 aa14.63□□□□□ -0.07
TPM3-211ENST00000368531 AAK1Q2M2I8 961 aa14.63□□□□□ -0.07
TPM3-211ENST00000368531 PRSS36Q5K4E3 855 aa14.63□□□□□ -0.07
TPM3-211ENST00000368531 STXBP5Q5T5C0 1151 aa14.63□□□□□ -0.07
TPM3-211ENST00000368531 TMEM150AQ86TG1 271 aa14.63□□□□□ -0.07
TPM3-211ENST00000368531 CNGA4Q8IV77 575 aa14.63□□□□□ -0.07
TPM3-211ENST00000368531 SCUBE3Q8IX30 993 aa14.63□□□□□ -0.07
TPM3-211ENST00000368531 LEMD2Q8NC56 503 aa14.63□□□□□ -0.07
TPM3-211ENST00000368531 ST13P5Q8NFI4 369 aaPredicted RBP14.63□□□□□ -0.07
TPM3-211ENST00000368531 SLC30A5Q8TAD4 765 aa14.63□□□□□ -0.07
TPM3-211ENST00000368531 CLEC4CQ8WTT0 213 aa14.63□□□□□ -0.07
TPM3-211ENST00000368531 KCTD13Q8WZ19 329 aa14.63□□□□□ -0.07
TPM3-211ENST00000368531 MCRS1Q96EZ8 462 aa14.63□□□□□ -0.07
TPM3-211ENST00000368531 TRMT2BQ96GJ1 504 aaKnown RBP14.63□□□□□ -0.07
TPM3-211ENST00000368531 PPP1R13BQ96KQ4 1090 aa14.63□□□□□ -0.07
TPM3-211ENST00000368531 HSFY1Q96LI6 401 aa14.63□□□□□ -0.07
TPM3-211ENST00000368531 NOX5Q96PH1 765 aa14.63□□□□□ -0.07
TPM3-211ENST00000368531 CPXM1Q96SM3 734 aa14.63□□□□□ -0.07
TPM3-211ENST00000368531 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.63□□□□□ -0.07
TPM3-211ENST00000368531 TTLL2Q9BWV7 592 aa14.63□□□□□ -0.07
TPM3-211ENST00000368531 SLITRK6Q9H5Y7 841 aa14.63□□□□□ -0.07
TPM3-211ENST00000368531 SYNCQ9H7C4 482 aa14.63□□□□□ -0.07
TPM3-211ENST00000368531 TRPC7Q9HCX4 862 aa14.63□□□□□ -0.07
TPM3-211ENST00000368531 ABHD10Q9NUJ1 306 aa14.63□□□□□ -0.07
TPM3-211ENST00000368531 COMMD8Q9NX08 183 aa14.63□□□□□ -0.07
TPM3-211ENST00000368531 TRPM5Q9NZQ8 1165 aa14.63□□□□□ -0.07
TPM3-211ENST00000368531 TADA3O75528 432 aa14.62□□□□□ -0.07
TPM3-211ENST00000368531 FGF19O95750 216 aa14.62□□□□□ -0.07
TPM3-211ENST00000368531 ERBB2P04626 1255 aa14.62□□□□□ -0.07
TPM3-211ENST00000368531 CDC25CP30307 473 aa14.62□□□□□ -0.07
TPM3-211ENST00000368531 ACADSBP45954 432 aa14.62□□□□□ -0.07
TPM3-211ENST00000368531 PGFP49763 221 aa14.62□□□□□ -0.07
TPM3-211ENST00000368531 MRE11P49959 708 aa14.62□□□□□ -0.07
TPM3-211ENST00000368531 NOMO3P69849 1222 aa14.62□□□□□ -0.07
TPM3-211ENST00000368531 MRPS5P82675 430 aaKnown RBP14.62□□□□□ -0.07
TPM3-211ENST00000368531 SMAD2Q15796 467 aaKnown RBP14.62□□□□□ -0.07
TPM3-211ENST00000368531 MEA1Q16626 185 aa14.62□□□□□ -0.07
TPM3-211ENST00000368531 PUS10Q3MIT2 529 aaKnown RBP14.62□□□□□ -0.07
TPM3-211ENST00000368531 PTPN20Q4JDL3 420 aa14.62□□□□□ -0.07
TPM3-211ENST00000368531 ARHGAP15Q53QZ3 475 aa14.62□□□□□ -0.07
TPM3-211ENST00000368531 C2CD6Q53TS8 623 aa14.62□□□□□ -0.07
TPM3-211ENST00000368531 RAB41Q5JT25 222 aa14.62□□□□□ -0.07
TPM3-211ENST00000368531 GPR158Q5T848 1215 aa14.62□□□□□ -0.07
TPM3-211ENST00000368531 HGSNATQ68CP4 663 aa14.62□□□□□ -0.07
TPM3-211ENST00000368531 TXNDC8Q6A555 127 aa14.62□□□□□ -0.07
TPM3-211ENST00000368531 WDR59Q6PJI9 974 aa14.62□□□□□ -0.07
TPM3-211ENST00000368531 TRIM72Q6ZMU5 477 aa14.62□□□□□ -0.07
TPM3-211ENST00000368531 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.62□□□□□ -0.07
TPM3-211ENST00000368531 PHLDB2Q86SQ0 1253 aa14.62□□□□□ -0.07
TPM3-211ENST00000368531 ERICH1Q86X53 443 aa14.62□□□□□ -0.07
TPM3-211ENST00000368531 MAB21L3Q8N8X9 362 aa14.62□□□□□ -0.07
TPM3-211ENST00000368531 TC2NQ8N9U0 490 aa14.62□□□□□ -0.07
TPM3-211ENST00000368531 MRPS31Q92665 395 aaKnown RBP14.62□□□□□ -0.07
TPM3-211ENST00000368531 RPGRIP1Q96KN7 1286 aa14.62□□□□□ -0.07
TPM3-211ENST00000368531 MYADMQ96S97 322 aa14.62□□□□□ -0.07
TPM3-211ENST00000368531 DNAJC7Q99615 494 aa14.62□□□□□ -0.07
TPM3-211ENST00000368531 SLC4A5Q9BY07 1137 aa14.62□□□□□ -0.07
TPM3-211ENST00000368531 IL37Q9NZH6 218 aa14.62□□□□□ -0.07
TPM3-211ENST00000368531 ARHGAP20Q9P2F6 1191 aa14.62□□□□□ -0.07
TPM3-211ENST00000368531 SCML2Q9UQR0 700 aa14.62□□□□□ -0.07
TPM3-211ENST00000368531 FAM50BQ9Y247 325 aa14.62□□□□□ -0.07
TPM3-211ENST00000368531 BZW2Q9Y6E2 419 aaKnown RBP14.62□□□□□ -0.07
TPM3-211ENST00000368531 USP3Q9Y6I4 520 aa14.62□□□□□ -0.07
TPM3-211ENST00000368531 A0A1W2PQH9 124 aa14.61□□□□□ -0.07
TPM3-211ENST00000368531 LSM8O95777 96 aaKnown RBP14.61□□□□□ -0.07
TPM3-211ENST00000368531 ZBED1O96006 694 aa14.61□□□□□ -0.07
TPM3-211ENST00000368531 CYP1A1P04798 512 aaPredicted RBP14.61□□□□□ -0.07
TPM3-211ENST00000368531 CDH5P33151 784 aaPredicted RBP14.61□□□□□ -0.07
TPM3-211ENST00000368531 EIF4A3P38919 411 aaKnown RBP14.61□□□□□ -0.07
TPM3-211ENST00000368531 CLEC16AQ2KHT3 1053 aa14.61□□□□□ -0.07
TPM3-211ENST00000368531 OR6B2Q6IFH4 312 aa14.61□□□□□ -0.07
TPM3-211ENST00000368531 DNAAF5Q86Y56 855 aa14.61□□□□□ -0.07
TPM3-211ENST00000368531 IPO4Q8TEX9 1081 aaKnown RBP14.61□□□□□ -0.07
TPM3-211ENST00000368531 STK32AQ8WU08 396 aa14.61□□□□□ -0.07
TPM3-211ENST00000368531 FGF13Q92913 245 aa14.61□□□□□ -0.07
TPM3-211ENST00000368531 ZSWIM3Q96MP5 696 aa14.61□□□□□ -0.07
TPM3-211ENST00000368531 CHP1Q99653 195 aa14.61□□□□□ -0.07
TPM3-211ENST00000368531 SYT11Q9BT88 431 aa14.61□□□□□ -0.07
TPM3-211ENST00000368531 NMUR1Q9HB89 426 aa14.61□□□□□ -0.07
TPM3-211ENST00000368531 AVENQ9NQS1 362 aaPredicted RBP14.61□□□□□ -0.07
TPM3-211ENST00000368531 CNGB3Q9NQW8 809 aa14.61□□□□□ -0.07
TPM3-211ENST00000368531 TLR8Q9NR97 1041 aaKnown RBP14.61□□□□□ -0.07
TPM3-211ENST00000368531 NAGPAQ9UK23 515 aa14.61□□□□□ -0.07
TPM3-211ENST00000368531 NUDT5Q9UKK9 219 aa14.61□□□□□ -0.07
TPM3-211ENST00000368531 C2orf78A6NCI8 922 aa14.6□□□□□ -0.07
TPM3-211ENST00000368531 ZNF840PA6NDX5 716 aa14.6□□□□□ -0.07
TPM3-211ENST00000368531 DDX3XO00571 662 aaKnown RBP eCLIP14.6□□□□□ -0.07
TPM3-211ENST00000368531 PAPSS1O43252 624 aaPredicted RBP14.6□□□□□ -0.07
TPM3-211ENST00000368531 UNGP13051 313 aaPredicted RBP14.6□□□□□ -0.07
TPM3-211ENST00000368531 HNRNPH3P31942 346 aaKnown RBP14.6□□□□□ -0.07
TPM3-211ENST00000368531 NSFP46459 744 aaKnown RBP14.6□□□□□ -0.07
TPM3-211ENST00000368531 DAOAP59103 153 aa14.6□□□□□ -0.07
TPM3-211ENST00000368531 ARID5BQ14865 1188 aa14.6□□□□□ -0.07
TPM3-211ENST00000368531 MMS22LQ6ZRQ5 1243 aa14.6□□□□□ -0.07
TPM3-211ENST00000368531 HFE2Q6ZVN8 426 aa14.6□□□□□ -0.07
TPM3-211ENST00000368531 FAM183BPQ6ZVS7 135 aa14.6□□□□□ -0.07
TPM3-211ENST00000368531 CCDC186Q7Z3E2 898 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms