RNA–Protein interactions for RNA: ENST00000367367.8

PTPRC-203, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 2,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-203ENST00000367367 GPD1LQ8N335 351 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 MRPL43Q8N983 215 aaKnown RBP3.37□□□□□ -1.87
PTPRC-203ENST00000367367 RIN3Q8TB24 985 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 RIN2Q8WYP3 895 aaPredicted RBP3.37□□□□□ -1.87
PTPRC-203ENST00000367367 PPP2R3CQ969Q6 453 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 CCDC127Q96BQ5 260 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 PABPC5Q96DU9 382 aaKnown RBP3.37□□□□□ -1.87
PTPRC-203ENST00000367367 APOL5Q9BWW9 433 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 MTMR12Q9C0I1 747 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 KCTD10Q9H3F6 313 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 SLC38A7Q9NVC3 462 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 MCM8Q9UJA3 840 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 UBQLN1Q9UMX0 589 aaKnown RBP3.37□□□□□ -1.87
PTPRC-203ENST00000367367 MAPRE3Q9UPY8 281 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 NUB1Q9Y5A7 615 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 PCDHA5Q9Y5H7 936 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 CACNA1HO95180 2353 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 CACNA1IQ9P0X4 2223 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 TRIM49BA6NDI0 452 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 ZNF891A8MT65 544 aaPredicted RBP3.37□□□□□ -1.87
PTPRC-203ENST00000367367 TMEM189-UBE2V1I3L0A0 370 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 TEX28O15482 410 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 ADAM12O43184 909 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 EXTL3O43909 919 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 ZNF500O60304 480 aaPredicted RBP3.37□□□□□ -1.87
PTPRC-203ENST00000367367 EXOC3O60645 756 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 CLASP2O75122 1294 aaKnown RBP3.37□□□□□ -1.87
PTPRC-203ENST00000367367 CXCL14O95715 111 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 EFEMP2O95967 443 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 ITGB3P05106 788 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 WEE2P0C1S8 567 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 SPATA31D3P0C874 917 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 DLATP10515 647 aaKnown RBP3.37□□□□□ -1.87
PTPRC-203ENST00000367367 IL9P15248 144 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 TIMP2P16035 220 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 NR2F2P24468 414 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 DEKP35659 375 aaKnown RBP3.37□□□□□ -1.87
PTPRC-203ENST00000367367 PRCPP42785 496 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 PMS1P54277 932 aaKnown RBP3.37□□□□□ -1.87
PTPRC-203ENST00000367367 TFAMQ00059 246 aaKnown RBP3.37□□□□□ -1.87
PTPRC-203ENST00000367367 DHX9Q08211 1270 aaKnown RBP3.37□□□□□ -1.87
PTPRC-203ENST00000367367 POU4F2Q12837 409 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 NNTQ13423 1086 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 KCNB1Q14721 858 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 PCBP2Q15366 365 aaKnown RBP eCLIP3.37□□□□□ -1.87
PTPRC-203ENST00000367367 ZBTB6Q15916 424 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 KYAT1Q16773 422 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 DUSP6Q16828 381 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 USP41Q3LFD5 358 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 C9orf57Q5W0N0 161 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 HGSNATQ68CP4 663 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 KIAA1211LQ6NV74 962 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 LVRNQ6Q4G3 990 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 SPATA31D4Q6ZUB0 917 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 SYDE1Q6ZW31 735 aaPredicted RBP3.37□□□□□ -1.87
PTPRC-203ENST00000367367 PPFIBP1Q86W92 1011 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 PJA1Q8NG27 643 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 OR5B17Q8NGF7 314 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 SPATA20Q8TB22 786 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 DDX1Q92499 740 aaKnown RBP3.37□□□□□ -1.87
PTPRC-203ENST00000367367 SMARCE1Q969G3 411 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 CCDC47Q96A33 483 aaKnown RBP3.37□□□□□ -1.87
PTPRC-203ENST00000367367 ELMO3Q96BJ8 720 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 CCDC34Q96HJ3 373 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 TIGD1Q96MW7 591 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 NSUN5Q96P11 429 aaKnown RBP3.37□□□□□ -1.87
PTPRC-203ENST00000367367 POP1Q99575 1024 aaKnown RBP3.37□□□□□ -1.87
PTPRC-203ENST00000367367 HERC2P3Q9BVR0 1158 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 SARGQ9BW04 601 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 COLEC11Q9BWP8 271 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 ASB7Q9H672 318 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 PLEKHA5Q9HAU0 1116 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 NGRNQ9NPE2 291 aaKnown RBP3.37□□□□□ -1.87
PTPRC-203ENST00000367367 MRPL17Q9NRX2 175 aaKnown RBP3.37□□□□□ -1.87
PTPRC-203ENST00000367367 CHST7Q9NS84 486 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 CLEC1BQ9P126 229 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 C2CD2Q9Y426 696 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 TIMM13Q9Y5L4 95 aaPredicted RBP3.37□□□□□ -1.87
PTPRC-203ENST00000367367 IRAK3Q9Y616 596 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 WDR87Q6ZQQ6 2873 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 MUC6Q6W4X9 2439 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.36□□□□□ -1.87
PTPRC-203ENST00000367367 ZNF233A6NK53 670 aa3.36□□□□□ -1.87
PTPRC-203ENST00000367367 PDXKO00764 312 aa3.36□□□□□ -1.87
PTPRC-203ENST00000367367 RFPL2O75678 378 aa3.36□□□□□ -1.87
PTPRC-203ENST00000367367 RFPL3O75679 317 aa3.36□□□□□ -1.87
PTPRC-203ENST00000367367 PRKD3O94806 890 aa3.36□□□□□ -1.87
PTPRC-203ENST00000367367 NR3C1P04150 777 aa3.36□□□□□ -1.87
PTPRC-203ENST00000367367 KRT19P08727 400 aa3.36□□□□□ -1.87
PTPRC-203ENST00000367367 TMEM191BP0C7N4 346 aa3.36□□□□□ -1.87
PTPRC-203ENST00000367367 TNNI1P19237 187 aa3.36□□□□□ -1.87
PTPRC-203ENST00000367367 SP100P23497 879 aaPredicted RBP3.36□□□□□ -1.87
PTPRC-203ENST00000367367 KLRC2P26717 231 aa3.36□□□□□ -1.87
PTPRC-203ENST00000367367 CALRP27797 417 aaKnown RBP3.36□□□□□ -1.87
PTPRC-203ENST00000367367 LRPAP1P30533 357 aa3.36□□□□□ -1.87
PTPRC-203ENST00000367367 CLCN4P51793 760 aa3.36□□□□□ -1.87
PTPRC-203ENST00000367367 LILRA4P59901 499 aa3.36□□□□□ -1.87
PTPRC-203ENST00000367367 DLG4P78352 724 aa3.36□□□□□ -1.87
PTPRC-203ENST00000367367 ATP11AP98196 1134 aa3.36□□□□□ -1.87
PTPRC-203ENST00000367367 DSG1Q02413 1049 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms