RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 RFC1P35251 1148 aaPredicted RBP12.85□□□□□ -0.35
CAPN9-203ENST00000366666 ZNF252P-AS1Q0IIN9 211 aa12.85□□□□□ -0.35
CAPN9-203ENST00000366666 PSMD5Q16401 504 aa12.85□□□□□ -0.35
CAPN9-203ENST00000366666 KIAA1841Q6NSI8 718 aa12.85□□□□□ -0.35
CAPN9-203ENST00000366666 ANKS3Q6ZW76 656 aa12.85□□□□□ -0.35
CAPN9-203ENST00000366666 TMEM110Q86TL2 294 aa12.85□□□□□ -0.35
CAPN9-203ENST00000366666 DDX53Q86TM3 631 aaKnown RBP12.85□□□□□ -0.35
CAPN9-203ENST00000366666 RHOT2Q8IXI1 618 aa12.85□□□□□ -0.35
CAPN9-203ENST00000366666 GPR152Q8TDT2 470 aa12.85□□□□□ -0.35
CAPN9-203ENST00000366666 PIK3R5Q8WYR1 880 aa12.85□□□□□ -0.35
CAPN9-203ENST00000366666 KHSRPQ92945 711 aaKnown RBP eCLIP12.85□□□□□ -0.35
CAPN9-203ENST00000366666 ZBTB9Q96C00 473 aa12.85□□□□□ -0.35
CAPN9-203ENST00000366666 SMARCD1Q96GM5 515 aa12.85□□□□□ -0.35
CAPN9-203ENST00000366666 MCEEQ96PE7 176 aa12.85□□□□□ -0.35
CAPN9-203ENST00000366666 GDF15Q99988 308 aa12.85□□□□□ -0.35
CAPN9-203ENST00000366666 CSNK1G1Q9HCP0 422 aa12.85□□□□□ -0.35
CAPN9-203ENST00000366666 AVENQ9NQS1 362 aaPredicted RBP12.85□□□□□ -0.35
CAPN9-203ENST00000366666 METTL5Q9NRN9 209 aaKnown RBP12.85□□□□□ -0.35
CAPN9-203ENST00000366666 ANAPC7Q9UJX3 599 aa12.85□□□□□ -0.35
CAPN9-203ENST00000366666 SLC27A5Q9Y2P5 690 aa12.85□□□□□ -0.35
CAPN9-203ENST00000366666 PCDHB12Q9Y5F1 795 aa12.85□□□□□ -0.35
CAPN9-203ENST00000366666 MYO16Q9Y6X6 1858 aa12.85□□□□□ -0.35
CAPN9-203ENST00000366666 CPP00450 1065 aa12.84□□□□□ -0.35
CAPN9-203ENST00000366666 SETSIPP0DME0 302 aa12.84□□□□□ -0.35
CAPN9-203ENST00000366666 MYBL1P10243 752 aa12.84□□□□□ -0.35
CAPN9-203ENST00000366666 RPL34P49207 117 aaKnown RBP12.84□□□□□ -0.35
CAPN9-203ENST00000366666 RNASE9P60153 205 aaKnown RBP12.84□□□□□ -0.35
CAPN9-203ENST00000366666 DSG1Q02413 1049 aa12.84□□□□□ -0.35
CAPN9-203ENST00000366666 ADIGQ0VDE8 80 aa12.84□□□□□ -0.35
CAPN9-203ENST00000366666 MESDQ14696 234 aa12.84□□□□□ -0.35
CAPN9-203ENST00000366666 OR6B2Q6IFH4 312 aa12.84□□□□□ -0.35
CAPN9-203ENST00000366666 OLFML1Q6UWY5 402 aa12.84□□□□□ -0.35
CAPN9-203ENST00000366666 DAAM2Q86T65 1068 aa12.84□□□□□ -0.35
CAPN9-203ENST00000366666 SPATA2LQ8IUW3 424 aaPredicted RBP12.84□□□□□ -0.35
CAPN9-203ENST00000366666 C3orf20Q8ND61 904 aa12.84□□□□□ -0.35
CAPN9-203ENST00000366666 RUBCNQ92622 972 aa12.84□□□□□ -0.35
CAPN9-203ENST00000366666 MCRS1Q96EZ8 462 aa12.84□□□□□ -0.35
CAPN9-203ENST00000366666 MTRRQ9UBK8 725 aa12.84□□□□□ -0.35
CAPN9-203ENST00000366666 YBX2Q9Y2T7 364 aaKnown RBP12.84□□□□□ -0.35
CAPN9-203ENST00000366666 ATG2AQ2TAZ0 1938 aa12.84□□□□□ -0.35
CAPN9-203ENST00000366666 PLXNA3P51805 1871 aa12.84□□□□□ -0.35
CAPN9-203ENST00000366666 MYO9BQ13459 2157 aa12.84□□□□□ -0.35
CAPN9-203ENST00000366666 MTMR11A4FU01 709 aa12.84□□□□□ -0.35
CAPN9-203ENST00000366666 MTA2O94776 668 aa12.84□□□□□ -0.35
CAPN9-203ENST00000366666 SYF2O95926 243 aaKnown RBP12.84□□□□□ -0.35
CAPN9-203ENST00000366666 CTNNB1P35222 781 aa12.84□□□□□ -0.35
CAPN9-203ENST00000366666 GLUD2P49448 558 aa12.84□□□□□ -0.35
CAPN9-203ENST00000366666 DNA2P51530 1060 aa12.84□□□□□ -0.35
CAPN9-203ENST00000366666 ROR1Q01973 937 aa12.84□□□□□ -0.35
CAPN9-203ENST00000366666 TCEAL1Q15170 157 aa12.84□□□□□ -0.35
CAPN9-203ENST00000366666 DDR2Q16832 855 aa12.84□□□□□ -0.35
CAPN9-203ENST00000366666 RAB6CQ53S08 254 aa12.84□□□□□ -0.35
CAPN9-203ENST00000366666 FAM102AQ5T9C2 384 aaPredicted RBP12.84□□□□□ -0.35
CAPN9-203ENST00000366666 LIN9Q5TKA1 542 aa12.84□□□□□ -0.35
CAPN9-203ENST00000366666 DNAJC24Q6P3W2 148 aa12.84□□□□□ -0.35
CAPN9-203ENST00000366666 LRRC31Q6UY01 552 aa12.84□□□□□ -0.35
CAPN9-203ENST00000366666 TRIM58Q8NG06 486 aa12.84□□□□□ -0.35
CAPN9-203ENST00000366666 SCAMP5Q8TAC9 235 aa12.84□□□□□ -0.35
CAPN9-203ENST00000366666 COG1Q8WTW3 980 aa12.84□□□□□ -0.35
CAPN9-203ENST00000366666 STK32AQ8WU08 396 aa12.84□□□□□ -0.35
CAPN9-203ENST00000366666 TRIM11Q96F44 468 aa12.84□□□□□ -0.35
CAPN9-203ENST00000366666 PSMB7Q99436 277 aa12.84□□□□□ -0.35
CAPN9-203ENST00000366666 HERC2P3Q9BVR0 1158 aa12.84□□□□□ -0.35
CAPN9-203ENST00000366666 UBE2OQ9C0C9 1292 aaKnown RBP12.84□□□□□ -0.35
CAPN9-203ENST00000366666 RAB6CQ9H0N0 254 aa12.84□□□□□ -0.35
CAPN9-203ENST00000366666 MTIF3Q9H2K0 278 aaKnown RBP12.84□□□□□ -0.35
CAPN9-203ENST00000366666 FAM204AQ9H8W3 233 aa12.84□□□□□ -0.35
CAPN9-203ENST00000366666 PARVAQ9NVD7 372 aa12.84□□□□□ -0.35
CAPN9-203ENST00000366666 HPCAL4Q9UM19 191 aa12.84□□□□□ -0.35
CAPN9-203ENST00000366666 OR6C75A6NL08 312 aa12.83□□□□□ -0.36
CAPN9-203ENST00000366666 RNF40O75150 1001 aa12.83□□□□□ -0.36
CAPN9-203ENST00000366666 BMPR1AP36894 532 aa12.83□□□□□ -0.36
CAPN9-203ENST00000366666 HADHBP55084 474 aaKnown RBP12.83□□□□□ -0.36
CAPN9-203ENST00000366666 GSCP56915 257 aaPredicted RBP12.83□□□□□ -0.36
CAPN9-203ENST00000366666 ERVFC1P60507 584 aa12.83□□□□□ -0.36
CAPN9-203ENST00000366666 ADCY1Q08828 1119 aa12.83□□□□□ -0.36
CAPN9-203ENST00000366666 GPR17Q13304 367 aa12.83□□□□□ -0.36
CAPN9-203ENST00000366666 SLC8B1Q6J4K2 584 aa12.83□□□□□ -0.36
CAPN9-203ENST00000366666 SLFN11Q7Z7L1 901 aa12.83□□□□□ -0.36
CAPN9-203ENST00000366666 SCN4BQ8IWT1 228 aa12.83□□□□□ -0.36
CAPN9-203ENST00000366666 DCP1BQ8IZD4 617 aaKnown RBP12.83□□□□□ -0.36
CAPN9-203ENST00000366666 FEZF2Q8TBJ5 459 aa12.83□□□□□ -0.36
CAPN9-203ENST00000366666 DNAI2Q9GZS0 605 aa12.83□□□□□ -0.36
CAPN9-203ENST00000366666 AAASQ9NRG9 546 aa12.83□□□□□ -0.36
CAPN9-203ENST00000366666 UVRAGQ9P2Y5 699 aa12.83□□□□□ -0.36
CAPN9-203ENST00000366666 ALG6Q9Y672 507 aa12.83□□□□□ -0.36
CAPN9-203ENST00000366666 TMEM191CA6NGB0 347 aa12.83□□□□□ -0.36
CAPN9-203ENST00000366666 KIF1CO43896 1103 aaKnown RBP12.83□□□□□ -0.36
CAPN9-203ENST00000366666 SRGAP2O75044 1071 aa12.83□□□□□ -0.36
CAPN9-203ENST00000366666 KRT3P12035 628 aa12.83□□□□□ -0.36
CAPN9-203ENST00000366666 TCF4P15884 667 aa12.83□□□□□ -0.36
CAPN9-203ENST00000366666 PPM1AP35813 382 aa12.83□□□□□ -0.36
CAPN9-203ENST00000366666 FLT3P36888 993 aa12.83□□□□□ -0.36
CAPN9-203ENST00000366666 GRIK1P39086 918 aa12.83□□□□□ -0.36
CAPN9-203ENST00000366666 PGFP49763 221 aa12.83□□□□□ -0.36
CAPN9-203ENST00000366666 TKTL1P51854 596 aa12.83□□□□□ -0.36
CAPN9-203ENST00000366666 DUSP4Q13115 394 aa12.83□□□□□ -0.36
CAPN9-203ENST00000366666 ZNF268Q14587 947 aaPredicted RBP12.83□□□□□ -0.36
CAPN9-203ENST00000366666 MAPRE1Q15691 268 aaKnown RBP12.83□□□□□ -0.36
CAPN9-203ENST00000366666 CFAP221Q4G0U5 840 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms