RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 ENOX2Q16206 610 aaKnown RBP11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 ARHGAP44Q17R89 818 aa11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 DUOXA2Q1HG44 320 aa11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 DCAF4L1Q3SXM0 396 aa11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 CCDC122Q5T0U0 273 aa11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 TANGO2Q6ICL3 276 aa11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 CEP68Q76N32 757 aa11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 FAM71AQ8IYT1 594 aa11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 SPEM1Q8N4L4 309 aa11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 LNX1Q8TBB1 728 aaPredicted RBP11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 SLC7A14Q8TBB6 771 aa11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 SHC3Q92529 594 aa11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 ZNF592Q92610 1267 aa11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 MCRS1Q96EZ8 462 aa11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 KREMEN1Q96MU8 473 aa11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 ADPGKQ9BRR6 497 aa11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 SYT11Q9BT88 431 aa11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 ARRDC1-AS1Q9H2J1 176 aa11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 NXF3Q9H4D5 531 aaKnown RBP11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 BRD9Q9H8M2 597 aa11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 RPF1Q9H9Y2 349 aaKnown RBP11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 DNAI1Q9UI46 699 aa11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 NENFQ9UMX5 172 aa11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 LHX6Q9UPM6 363 aa11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 MRPS23Q9Y3D9 190 aaKnown RBP11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 SMG1Q96Q15 3661 aaKnown RBP11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 FREM2Q5SZK8 3169 aa11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 BPTFQ12830 3046 aa11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 SF3B1O75533 1304 aaKnown RBP eCLIP11.94□□□□□ -0.5
CSNK1E-202ENST00000366216 A0A087X0T9 212 aa11.94□□□□□ -0.5
CSNK1E-202ENST00000366216 RCCD1A6NED2 376 aa11.94□□□□□ -0.5
CSNK1E-202ENST00000366216 K7ESF4 209 aa11.94□□□□□ -0.5
CSNK1E-202ENST00000366216 AXIN1O15169 862 aa11.94□□□□□ -0.5
CSNK1E-202ENST00000366216 PAPSS2O95340 614 aaPredicted RBP11.94□□□□□ -0.5
CSNK1E-202ENST00000366216 VNN1O95497 513 aa11.94□□□□□ -0.5
CSNK1E-202ENST00000366216 FAM228BP0C875 321 aa11.94□□□□□ -0.5
CSNK1E-202ENST00000366216 CHRNB1P11230 501 aa11.94□□□□□ -0.5
CSNK1E-202ENST00000366216 AKAP5P24588 427 aa11.94□□□□□ -0.5
CSNK1E-202ENST00000366216 CASQ1P31415 396 aa11.94□□□□□ -0.5
CSNK1E-202ENST00000366216 PIK3CAP42336 1068 aa11.94□□□□□ -0.5
CSNK1E-202ENST00000366216 BIRC3Q13489 604 aa11.94□□□□□ -0.5
CSNK1E-202ENST00000366216 GRM2Q14416 872 aa11.94□□□□□ -0.5
CSNK1E-202ENST00000366216 PSMD5Q16401 504 aa11.94□□□□□ -0.5
CSNK1E-202ENST00000366216 SEZ6Q53EL9 994 aa11.94□□□□□ -0.5
CSNK1E-202ENST00000366216 HEATR6Q6AI08 1181 aaKnown RBP11.94□□□□□ -0.5
CSNK1E-202ENST00000366216 CDR2LQ86X02 465 aaPredicted RBP11.94□□□□□ -0.5
CSNK1E-202ENST00000366216 PPM1KQ8N3J5 372 aa11.94□□□□□ -0.5
CSNK1E-202ENST00000366216 OR5B17Q8NGF7 314 aa11.94□□□□□ -0.5
CSNK1E-202ENST00000366216 SLC30A5Q8TAD4 765 aa11.94□□□□□ -0.5
CSNK1E-202ENST00000366216 HASPINQ8TF76 798 aa11.94□□□□□ -0.5
CSNK1E-202ENST00000366216 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.94□□□□□ -0.5
CSNK1E-202ENST00000366216 APOL6Q9BWW8 343 aa11.94□□□□□ -0.5
CSNK1E-202ENST00000366216 TMEM121BQ9BXQ6 578 aaPredicted RBP11.94□□□□□ -0.5
CSNK1E-202ENST00000366216 ADAM33Q9BZ11 813 aa11.94□□□□□ -0.5
CSNK1E-202ENST00000366216 LACRTQ9GZZ8 138 aa11.94□□□□□ -0.5
CSNK1E-202ENST00000366216 ASB7Q9H672 318 aa11.94□□□□□ -0.5
CSNK1E-202ENST00000366216 ADAMTS1Q9UHI8 967 aa11.94□□□□□ -0.5
CSNK1E-202ENST00000366216 PIAS3Q9Y6X2 628 aa11.94□□□□□ -0.5
CSNK1E-202ENST00000366216 MAST4O15021 2626 aa11.94□□□□□ -0.5
CSNK1E-202ENST00000366216 SHROOM3Q8TF72 1996 aa11.94□□□□□ -0.5
CSNK1E-202ENST00000366216 BTNL10A8MVZ5 291 aa11.93□□□□□ -0.5
CSNK1E-202ENST00000366216 TADA2AO75478 443 aa11.93□□□□□ -0.5
CSNK1E-202ENST00000366216 ABL1P00519 1130 aa11.93□□□□□ -0.5
CSNK1E-202ENST00000366216 TBXAS1P24557 533 aaPredicted RBP11.93□□□□□ -0.5
CSNK1E-202ENST00000366216 GRM5P41594 1212 aa11.93□□□□□ -0.5
CSNK1E-202ENST00000366216 FOXC1Q12948 553 aa11.93□□□□□ -0.5
CSNK1E-202ENST00000366216 NCOA4Q13772 614 aa11.93□□□□□ -0.5
CSNK1E-202ENST00000366216 NAB2Q15742 525 aa11.93□□□□□ -0.5
CSNK1E-202ENST00000366216 ZNF569Q5MCW4 686 aa11.93□□□□□ -0.5
CSNK1E-202ENST00000366216 LMBRD2Q68DH5 695 aaPredicted RBP11.93□□□□□ -0.5
CSNK1E-202ENST00000366216 TRAPPC11Q7Z392 1133 aa11.93□□□□□ -0.5
CSNK1E-202ENST00000366216 NT5DC4Q86YG4 428 aa11.93□□□□□ -0.5
CSNK1E-202ENST00000366216 GPIHBP1Q8IV16 184 aa11.93□□□□□ -0.5
CSNK1E-202ENST00000366216 CD302Q8IX05 232 aa11.93□□□□□ -0.5
CSNK1E-202ENST00000366216 CEP120Q8N960 986 aa11.93□□□□□ -0.5
CSNK1E-202ENST00000366216 PIK3R5Q8WYR1 880 aa11.93□□□□□ -0.5
CSNK1E-202ENST00000366216 IRF7Q92985 503 aa11.93□□□□□ -0.5
CSNK1E-202ENST00000366216 KAT5Q92993 513 aa11.93□□□□□ -0.5
CSNK1E-202ENST00000366216 TATDN2Q93075 761 aa11.93□□□□□ -0.5
CSNK1E-202ENST00000366216 FAXDC2Q96IV6 333 aa11.93□□□□□ -0.5
CSNK1E-202ENST00000366216 ANKRD36BP1Q96IX9 119 aa11.93□□□□□ -0.5
CSNK1E-202ENST00000366216 LOXL4Q96JB6 756 aa11.93□□□□□ -0.5
CSNK1E-202ENST00000366216 WDR24Q96S15 920 aa11.93□□□□□ -0.5
CSNK1E-202ENST00000366216 TTPALQ9BTX7 342 aa11.93□□□□□ -0.5
CSNK1E-202ENST00000366216 TRMT61BQ9BVS5 477 aaKnown RBP11.93□□□□□ -0.5
CSNK1E-202ENST00000366216 L2HGDHQ9H9P8 463 aa11.93□□□□□ -0.5
CSNK1E-202ENST00000366216 ZFP14Q9HCL3 533 aa11.93□□□□□ -0.5
CSNK1E-202ENST00000366216 TRPV5Q9NQA5 729 aa11.93□□□□□ -0.5
CSNK1E-202ENST00000366216 KLK14Q9P0G3 267 aa11.93□□□□□ -0.5
CSNK1E-202ENST00000366216 NAGPAQ9UK23 515 aa11.93□□□□□ -0.5
CSNK1E-202ENST00000366216 INTUQ9ULD6 942 aa11.93□□□□□ -0.5
CSNK1E-202ENST00000366216 WASF3Q9UPY6 502 aa11.93□□□□□ -0.5
CSNK1E-202ENST00000366216 ADAMTS9Q9P2N4 1935 aa11.93□□□□□ -0.5
CSNK1E-202ENST00000366216 TNRC6BQ9UPQ9 1833 aaKnown RBP11.93□□□□□ -0.5
CSNK1E-202ENST00000366216 ASXL3Q9C0F0 2248 aa11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 TULP1O00294 542 aaPredicted RBP11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 DDX3XO00571 662 aaKnown RBP eCLIP11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 FANCGO15287 622 aa11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 PHACTR2O75167 634 aa11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 EPN2O95208 641 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms