RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 TERB1Q8NA31 727 aa5.49□□□□□ -1.53
RNU4-28P-201ENST00000364739 PNLDC1Q8NA58 520 aaKnown RBP5.49□□□□□ -1.53
RNU4-28P-201ENST00000364739 PHKBQ93100 1093 aa5.49□□□□□ -1.53
RNU4-28P-201ENST00000364739 THAP7Q9BT49 309 aaPredicted RBP5.49□□□□□ -1.53
RNU4-28P-201ENST00000364739 CIPCQ9C0C6 399 aa5.49□□□□□ -1.53
RNU4-28P-201ENST00000364739 GJB4Q9NTQ9 266 aa5.49□□□□□ -1.53
RNU4-28P-201ENST00000364739 DKK4Q9UBT3 224 aa5.49□□□□□ -1.53
RNU4-28P-201ENST00000364739 LINC01548A6NM66 108 aa5.48□□□□□ -1.53
RNU4-28P-201ENST00000364739 PRRT4C9JH25 899 aa5.48□□□□□ -1.53
RNU4-28P-201ENST00000364739 PSMD9O00233 223 aa5.48□□□□□ -1.53
RNU4-28P-201ENST00000364739 KPNA5O15131 536 aa5.48□□□□□ -1.53
RNU4-28P-201ENST00000364739 FGAP02671 866 aa5.48□□□□□ -1.53
RNU4-28P-201ENST00000364739 DLDP09622 509 aaKnown RBP5.48□□□□□ -1.53
RNU4-28P-201ENST00000364739 PGDP52209 483 aa5.48□□□□□ -1.53
RNU4-28P-201ENST00000364739 HTRA4P83105 476 aaPredicted RBP5.48□□□□□ -1.53
RNU4-28P-201ENST00000364739 COBLL1Q53SF7 1204 aa5.48□□□□□ -1.53
RNU4-28P-201ENST00000364739 LRCH2Q5VUJ6 765 aa5.48□□□□□ -1.53
RNU4-28P-201ENST00000364739 KIRREL2Q6UWL6 708 aa5.48□□□□□ -1.53
RNU4-28P-201ENST00000364739 TRIM72Q6ZMU5 477 aa5.48□□□□□ -1.53
RNU4-28P-201ENST00000364739 PTF1AQ7RTS3 328 aa5.48□□□□□ -1.53
RNU4-28P-201ENST00000364739 ZNF804AQ7Z570 1209 aa5.48□□□□□ -1.53
RNU4-28P-201ENST00000364739 LIX1LQ8IVB5 337 aa5.48□□□□□ -1.53
RNU4-28P-201ENST00000364739 YAF2Q8IY57 180 aa5.48□□□□□ -1.53
RNU4-28P-201ENST00000364739 METTL25Q8N6Q8 603 aa5.48□□□□□ -1.53
RNU4-28P-201ENST00000364739 SIRT6Q8N6T7 355 aa5.48□□□□□ -1.53
RNU4-28P-201ENST00000364739 CTHRC1Q96CG8 243 aa5.48□□□□□ -1.53
RNU4-28P-201ENST00000364739 QTRT1Q9BXR0 403 aaKnown RBP5.48□□□□□ -1.53
RNU4-28P-201ENST00000364739 NUP62CLQ9H1M0 184 aa5.48□□□□□ -1.53
RNU4-28P-201ENST00000364739 DDX21Q9NR30 783 aaKnown RBP eCLIP5.48□□□□□ -1.53
RNU4-28P-201ENST00000364739 RHPN2P1A8MT19 583 aa5.47□□□□□ -1.53
RNU4-28P-201ENST00000364739 EXOC5O00471 708 aa5.47□□□□□ -1.53
RNU4-28P-201ENST00000364739 CCP110O43303 1012 aa5.47□□□□□ -1.53
RNU4-28P-201ENST00000364739 SPRY2O43597 315 aa5.47□□□□□ -1.53
RNU4-28P-201ENST00000364739 TJP3O95049 919 aa5.47□□□□□ -1.53
RNU4-28P-201ENST00000364739 PRKCBP05771 671 aa5.47□□□□□ -1.53
RNU4-28P-201ENST00000364739 CELA2AP08217 269 aa5.47□□□□□ -1.53
RNU4-28P-201ENST00000364739 PARP1P09874 1014 aaKnown RBP5.47□□□□□ -1.53
RNU4-28P-201ENST00000364739 IL1R2P27930 398 aa5.47□□□□□ -1.53
RNU4-28P-201ENST00000364739 EPHA3P29320 983 aa5.47□□□□□ -1.53
RNU4-28P-201ENST00000364739 GATMP50440 423 aa5.47□□□□□ -1.53
RNU4-28P-201ENST00000364739 RENBPP51606 427 aa5.47□□□□□ -1.53
RNU4-28P-201ENST00000364739 TIRAPP58753 221 aa5.47□□□□□ -1.53
RNU4-28P-201ENST00000364739 CEP78Q5JTW2 689 aa5.47□□□□□ -1.53
RNU4-28P-201ENST00000364739 DAZAP1Q96EP5 407 aaKnown RBP5.47□□□□□ -1.53
RNU4-28P-201ENST00000364739 RITA1Q96K30 269 aa5.47□□□□□ -1.53
RNU4-28P-201ENST00000364739 MSLNLQ96KJ4 702 aa5.47□□□□□ -1.53
RNU4-28P-201ENST00000364739 MMS19Q96T76 1030 aa5.47□□□□□ -1.53
RNU4-28P-201ENST00000364739 VN1R3Q9BXE9 311 aa5.47□□□□□ -1.53
RNU4-28P-201ENST00000364739 ZNF212Q9UDV6 495 aa5.47□□□□□ -1.53
RNU4-28P-201ENST00000364739 AMFRQ9UKV5 643 aa5.47□□□□□ -1.53
RNU4-28P-201ENST00000364739 ASAP1Q9ULH1 1129 aa5.47□□□□□ -1.53
RNU4-28P-201ENST00000364739 PAXBP1Q9Y5B6 917 aa5.47□□□□□ -1.53
RNU4-28P-201ENST00000364739 COL3A1P02461 1466 aaPredicted RBP5.46□□□□□ -1.53
RNU4-28P-201ENST00000364739 WDR91A4D1P6 747 aa5.46□□□□□ -1.54
RNU4-28P-201ENST00000364739 DNAJC9-AS1A6NH13 148 aa5.46□□□□□ -1.54
RNU4-28P-201ENST00000364739 APAF1O14727 1248 aa5.46□□□□□ -1.54
RNU4-28P-201ENST00000364739 CREB1P16220 341 aa5.46□□□□□ -1.54
RNU4-28P-201ENST00000364739 LMO1P25800 156 aa5.46□□□□□ -1.54
RNU4-28P-201ENST00000364739 COPB1P53618 953 aaKnown RBP5.46□□□□□ -1.54
RNU4-28P-201ENST00000364739 TUBA4AP68366 448 aa5.46□□□□□ -1.54
RNU4-28P-201ENST00000364739 AWAT1Q58HT5 328 aa5.46□□□□□ -1.54
RNU4-28P-201ENST00000364739 CLEC9AQ6UXN8 241 aa5.46□□□□□ -1.54
RNU4-28P-201ENST00000364739 SERPINA13PQ6UXR4 307 aa5.46□□□□□ -1.54
RNU4-28P-201ENST00000364739 RNF44Q7L0R7 432 aa5.46□□□□□ -1.54
RNU4-28P-201ENST00000364739 BCDIN3DQ7Z5W3 292 aaKnown RBP5.46□□□□□ -1.54
RNU4-28P-201ENST00000364739 VGLL2Q8N8G2 317 aa5.46□□□□□ -1.54
RNU4-28P-201ENST00000364739 TTC17Q96AE7 1141 aa5.46□□□□□ -1.54
RNU4-28P-201ENST00000364739 RSPRY1Q96DX4 576 aa5.46□□□□□ -1.54
RNU4-28P-201ENST00000364739 WDYHV1Q96HA8 205 aa5.46□□□□□ -1.54
RNU4-28P-201ENST00000364739 STRBPQ96SI9 672 aaKnown RBP5.46□□□□□ -1.54
RNU4-28P-201ENST00000364739 TBCBQ99426 244 aa5.46□□□□□ -1.54
RNU4-28P-201ENST00000364739 BRIP1Q9BX63 1249 aa5.46□□□□□ -1.54
RNU4-28P-201ENST00000364739 DHX36Q9H2U1 1008 aaKnown RBP5.46□□□□□ -1.54
RNU4-28P-201ENST00000364739 ASIC5Q9NY37 505 aa5.46□□□□□ -1.54
RNU4-28P-201ENST00000364739 TCRBV5S1A1TA0A578 114 aa5.45□□□□□ -1.54
RNU4-28P-201ENST00000364739 LATS1O95835 1130 aa5.45□□□□□ -1.54
RNU4-28P-201ENST00000364739 A1BGP04217 495 aa5.45□□□□□ -1.54
RNU4-28P-201ENST00000364739 MYL3P08590 195 aa5.45□□□□□ -1.54
RNU4-28P-201ENST00000364739 SLC5A1P13866 664 aa5.45□□□□□ -1.54
RNU4-28P-201ENST00000364739 DIO1P49895 249 aa5.45□□□□□ -1.54
RNU4-28P-201ENST00000364739 MTHFSP49914 203 aa5.45□□□□□ -1.54
RNU4-28P-201ENST00000364739 SUMO2P61956 95 aaKnown RBP5.45□□□□□ -1.54
RNU4-28P-201ENST00000364739 TIAL1Q01085 375 aaKnown RBP eCLIP5.45□□□□□ -1.54
RNU4-28P-201ENST00000364739 DEUP1Q05D60 604 aa5.45□□□□□ -1.54
RNU4-28P-201ENST00000364739 ZNF543Q08ER8 600 aa5.45□□□□□ -1.54
RNU4-28P-201ENST00000364739 LMAN2Q12907 356 aa5.45□□□□□ -1.54
RNU4-28P-201ENST00000364739 SRSF7Q16629 238 aaKnown RBP eCLIP5.45□□□□□ -1.54
RNU4-28P-201ENST00000364739 MANEALQ5VSG8 457 aa5.45□□□□□ -1.54
RNU4-28P-201ENST00000364739 KRT78Q8N1N4 520 aa5.45□□□□□ -1.54
RNU4-28P-201ENST00000364739 LRRC46Q96FV0 321 aa5.45□□□□□ -1.54
RNU4-28P-201ENST00000364739 C5orf34Q96MH7 638 aa5.45□□□□□ -1.54
RNU4-28P-201ENST00000364739 HIST1H2AAQ96QV6 131 aa5.45□□□□□ -1.54
RNU4-28P-201ENST00000364739 SNX18Q96RF0 628 aa5.45□□□□□ -1.54
RNU4-28P-201ENST00000364739 INO80BQ9C086 356 aaPredicted RBP5.45□□□□□ -1.54
RNU4-28P-201ENST00000364739 BTBD1Q9H0C5 482 aa5.45□□□□□ -1.54
RNU4-28P-201ENST00000364739 MGAT4CQ9UBM8 478 aa5.45□□□□□ -1.54
RNU4-28P-201ENST00000364739 RIMKLBQ9ULI2 386 aa5.45□□□□□ -1.54
RNU4-28P-201ENST00000364739 HPSEQ9Y251 543 aa5.45□□□□□ -1.54
RNU4-28P-201ENST00000364739 POM121BA6NF01 834 aa5.44□□□□□ -1.54
RNU4-28P-201ENST00000364739 IL18RAPO95256 599 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms