RNA–Protein interactions for RNA: ENST00000363904.1

RNU6-478P-201, Transcript of RNA, U6 small nuclear 478, pseudogene, humanhuman

BASIC

Gene RNU6-478P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-478P-201ENST00000363904 C9orf139Q6ZV77 190 aa0.34□□□□□ -2.36
RNU6-478P-201ENST00000363904 DDX53Q86TM3 631 aaKnown RBP0.34□□□□□ -2.36
RNU6-478P-201ENST00000363904 EPHX4Q8IUS5 362 aa0.34□□□□□ -2.36
RNU6-478P-201ENST00000363904 SRBD1Q8N5C6 995 aaKnown RBP0.34□□□□□ -2.36
RNU6-478P-201ENST00000363904 AOPEPQ8N6M6 819 aa0.34□□□□□ -2.36
RNU6-478P-201ENST00000363904 GRAPLQ8TC17 118 aaPredicted RBP0.34□□□□□ -2.36
RNU6-478P-201ENST00000363904 ZNF689Q96CS4 500 aaPredicted RBP0.34□□□□□ -2.36
RNU6-478P-201ENST00000363904 TRMT61AQ96FX7 289 aaKnown RBP0.34□□□□□ -2.36
RNU6-478P-201ENST00000363904 ZNF518BQ9C0D4 1074 aa0.34□□□□□ -2.36
RNU6-478P-201ENST00000363904 SMOC2Q9H3U7 446 aa0.34□□□□□ -2.36
RNU6-478P-201ENST00000363904 OGFRQ9NZT2 677 aa0.34□□□□□ -2.36
RNU6-478P-201ENST00000363904 COL20A1Q9P218 1284 aa0.34□□□□□ -2.36
RNU6-478P-201ENST00000363904 PPP1R1BQ9UD71 204 aaPredicted RBP0.34□□□□□ -2.36
RNU6-478P-201ENST00000363904 DDX41Q9UJV9 622 aaKnown RBP0.34□□□□□ -2.36
RNU6-478P-201ENST00000363904 SPO11Q9Y5K1 396 aa0.34□□□□□ -2.36
RNU6-478P-201ENST00000363904 PTGDR2Q9Y5Y4 395 aa0.34□□□□□ -2.36
RNU6-478P-201ENST00000363904 CDY2AQ9Y6F7 541 aa0.34□□□□□ -2.36
RNU6-478P-201ENST00000363904 IGLV3-10A0A075B6K4 115 aa0.33□□□□□ -2.36
RNU6-478P-201ENST00000363904 LOC101059915A0A1B0GWI6 518 aaPredicted RBP0.33□□□□□ -2.36
RNU6-478P-201ENST00000363904 A1L4Q6 167 aa0.33□□□□□ -2.36
RNU6-478P-201ENST00000363904 C2CD4BA6NLJ0 364 aa0.33□□□□□ -2.36
RNU6-478P-201ENST00000363904 AKAP10O43572 662 aa0.33□□□□□ -2.36
RNU6-478P-201ENST00000363904 CD48P09326 243 aa0.33□□□□□ -2.36
RNU6-478P-201ENST00000363904 PCSK1P29120 753 aa0.33□□□□□ -2.36
RNU6-478P-201ENST00000363904 MECP2P51608 486 aaKnown RBP0.33□□□□□ -2.36
RNU6-478P-201ENST00000363904 COPB1P53618 953 aaKnown RBP0.33□□□□□ -2.36
RNU6-478P-201ENST00000363904 Q0VFX4 171 aa0.33□□□□□ -2.36
RNU6-478P-201ENST00000363904 LARS2Q15031 903 aaKnown RBP0.33□□□□□ -2.36
RNU6-478P-201ENST00000363904 HLFQ16534 295 aa0.33□□□□□ -2.36
RNU6-478P-201ENST00000363904 TPRNQ4KMQ1 711 aa0.33□□□□□ -2.36
RNU6-478P-201ENST00000363904 FAM209AQ5JX71 171 aa0.33□□□□□ -2.36
RNU6-478P-201ENST00000363904 ICE2Q659A1 982 aa0.33□□□□□ -2.36
RNU6-478P-201ENST00000363904 FAM166AQ6J272 317 aa0.33□□□□□ -2.36
RNU6-478P-201ENST00000363904 DCDC5Q6ZRR9 648 aa0.33□□□□□ -2.36
RNU6-478P-201ENST00000363904 MARK2Q7KZI7 788 aaKnown RBP0.33□□□□□ -2.36
RNU6-478P-201ENST00000363904 FAM109AQ8N4B1 249 aa0.33□□□□□ -2.36
RNU6-478P-201ENST00000363904 LINC00612Q8N6U2 182 aa0.33□□□□□ -2.36
RNU6-478P-201ENST00000363904 ADAD2Q8NCV1 583 aaKnown RBP0.33□□□□□ -2.36
RNU6-478P-201ENST00000363904 CADM4Q8NFZ8 388 aa0.33□□□□□ -2.36
RNU6-478P-201ENST00000363904 SPATA20Q8TB22 786 aa0.33□□□□□ -2.36
RNU6-478P-201ENST00000363904 ZNF496Q96IT1 587 aaPredicted RBP0.33□□□□□ -2.36
RNU6-478P-201ENST00000363904 HS6ST2Q96MM7 605 aa0.33□□□□□ -2.36
RNU6-478P-201ENST00000363904 ORAI3Q9BRQ5 295 aa0.33□□□□□ -2.36
RNU6-478P-201ENST00000363904 ELOVL1Q9BW60 279 aa0.33□□□□□ -2.36
RNU6-478P-201ENST00000363904 CDK19Q9BWU1 502 aa0.33□□□□□ -2.36
RNU6-478P-201ENST00000363904 C11orf54Q9H0W9 315 aaPredicted RBP0.33□□□□□ -2.36
RNU6-478P-201ENST00000363904 ZMAT4Q9H898 229 aa0.33□□□□□ -2.36
RNU6-478P-201ENST00000363904 SLC52A2Q9HAB3 445 aa0.33□□□□□ -2.36
RNU6-478P-201ENST00000363904 RBM12Q9NTZ6 932 aaKnown RBP0.33□□□□□ -2.36
RNU6-478P-201ENST00000363904 DLGAP2Q9P1A6 1054 aa0.33□□□□□ -2.36
RNU6-478P-201ENST00000363904 KCNG1Q9UIX4 513 aa0.33□□□□□ -2.36
RNU6-478P-201ENST00000363904 MRVI1Q9Y6F6 885 aa0.33□□□□□ -2.36
RNU6-478P-201ENST00000363904 AHNAKQ09666 5890 aaKnown RBP0.32□□□□□ -2.36
RNU6-478P-201ENST00000363904 A0A0J9YWU9 116 aa0.32□□□□□ -2.36
RNU6-478P-201ENST00000363904 A0A1B0GVT2 93 aa0.32□□□□□ -2.36
RNU6-478P-201ENST00000363904 INAFM1C9JVW0 142 aa0.32□□□□□ -2.36
RNU6-478P-201ENST00000363904 AP4M1O00189 453 aa0.32□□□□□ -2.36
RNU6-478P-201ENST00000363904 ATG13O75143 517 aa0.32□□□□□ -2.36
RNU6-478P-201ENST00000363904 USP12O75317 370 aa0.32□□□□□ -2.36
RNU6-478P-201ENST00000363904 SLC22A3O75751 556 aa0.32□□□□□ -2.36
RNU6-478P-201ENST00000363904 PRKCBP05771 671 aa0.32□□□□□ -2.36
RNU6-478P-201ENST00000363904 DAOP14920 347 aa0.32□□□□□ -2.36
RNU6-478P-201ENST00000363904 GATA1P15976 413 aaPredicted RBP0.32□□□□□ -2.36
RNU6-478P-201ENST00000363904 KCNA6P17658 529 aa0.32□□□□□ -2.36
RNU6-478P-201ENST00000363904 SLC6A4P31645 630 aa0.32□□□□□ -2.36
RNU6-478P-201ENST00000363904 ILF3Q12906 894 aaKnown RBP eCLIP0.32□□□□□ -2.36
RNU6-478P-201ENST00000363904 LRRC32Q14392 662 aa0.32□□□□□ -2.36
RNU6-478P-201ENST00000363904 FAM110CQ1W6H9 321 aa0.32□□□□□ -2.36
RNU6-478P-201ENST00000363904 DALRD3Q5D0E6 543 aaKnown RBP0.32□□□□□ -2.36
RNU6-478P-201ENST00000363904 DACT2Q5SW24 774 aa0.32□□□□□ -2.36
RNU6-478P-201ENST00000363904 TMEM63BQ5T3F8 832 aa0.32□□□□□ -2.36
RNU6-478P-201ENST00000363904 PSD4Q8NDX1 1056 aa0.32□□□□□ -2.36
RNU6-478P-201ENST00000363904 C7orf57Q8NEG2 295 aa0.32□□□□□ -2.36
RNU6-478P-201ENST00000363904 DEPTORQ8TB45 409 aa0.32□□□□□ -2.36
RNU6-478P-201ENST00000363904 TMED6Q8WW62 240 aa0.32□□□□□ -2.36
RNU6-478P-201ENST00000363904 GLG1Q92896 1179 aa0.32□□□□□ -2.36
RNU6-478P-201ENST00000363904 CD101Q93033 1021 aa0.32□□□□□ -2.36
RNU6-478P-201ENST00000363904 MSI2Q96DH6 328 aaKnown RBP0.32□□□□□ -2.36
RNU6-478P-201ENST00000363904 SNX27Q96L92 541 aa0.32□□□□□ -2.36
RNU6-478P-201ENST00000363904 PUS7Q96PZ0 661 aaKnown RBP0.32□□□□□ -2.36
RNU6-478P-201ENST00000363904 WNT8AQ9H1J5 351 aa0.32□□□□□ -2.36
RNU6-478P-201ENST00000363904 PDZD7Q9H5P4 517 aa0.32□□□□□ -2.36
RNU6-478P-201ENST00000363904 ST7Q9NRC1 585 aa0.32□□□□□ -2.36
RNU6-478P-201ENST00000363904 TMPRSS11EQ9UL52 423 aa0.32□□□□□ -2.36
RNU6-478P-201ENST00000363904 FZD10Q9ULW2 581 aa0.32□□□□□ -2.36
RNU6-478P-201ENST00000363904 A0A0U1RQF3 1178 aa0.31□□□□□ -2.36
RNU6-478P-201ENST00000363904 TCRBV16S1A1N1A0A5B0 115 aa0.31□□□□□ -2.36
RNU6-478P-201ENST00000363904 C17orf51A8MQB3 221 aa0.31□□□□□ -2.36
RNU6-478P-201ENST00000363904 TRAFD1O14545 582 aaPredicted RBP0.31□□□□□ -2.36
RNU6-478P-201ENST00000363904 PRPF4O43172 522 aaKnown RBP eCLIP0.31□□□□□ -2.36
RNU6-478P-201ENST00000363904 IGKV3-15P01624 115 aa0.31□□□□□ -2.36
RNU6-478P-201ENST00000363904 CRYAAP02489 173 aa0.31□□□□□ -2.36
RNU6-478P-201ENST00000363904 CYP1A2P05177 515 aa0.31□□□□□ -2.36
RNU6-478P-201ENST00000363904 PRKCSHP14314 528 aaPredicted RBP0.31□□□□□ -2.36
RNU6-478P-201ENST00000363904 CHRM3P20309 590 aa0.31□□□□□ -2.36
RNU6-478P-201ENST00000363904 SLC12A2P55011 1212 aa0.31□□□□□ -2.36
RNU6-478P-201ENST00000363904 KRTAP10-10P60014 251 aa0.31□□□□□ -2.36
RNU6-478P-201ENST00000363904 IRX1P78414 480 aaPredicted RBP0.31□□□□□ -2.36
RNU6-478P-201ENST00000363904 KCNB1Q14721 858 aa0.31□□□□□ -2.36
RNU6-478P-201ENST00000363904 ST3GAL2Q16842 350 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms