RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 KCND3Q9UK17 655 aa4.11□□□□□ -1.75
RNU6-1249P-201ENST00000363237 ZHX1Q9UKY1 873 aaPredicted RBP4.11□□□□□ -1.75
RNU6-1249P-201ENST00000363237 BAG5Q9UL15 447 aa4.11□□□□□ -1.75
RNU6-1249P-201ENST00000363237 HSF4Q9ULV5 492 aa4.11□□□□□ -1.75
RNU6-1249P-201ENST00000363237 ANGEL1Q9UNK9 670 aaKnown RBP4.11□□□□□ -1.75
RNU6-1249P-201ENST00000363237 SMG5Q9UPR3 1016 aaKnown RBP4.11□□□□□ -1.75
RNU6-1249P-201ENST00000363237 PSAT1Q9Y617 370 aa4.11□□□□□ -1.75
RNU6-1249P-201ENST00000363237 E9PLN8 166 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 TSPAN4O14817 238 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 TULP3O75386 442 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 TAF5LO75529 589 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 MLYCDO95822 493 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 CSH1P0DML2 217 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 CSH2P0DML3 217 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 NR2F1P10589 423 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 UBL4AP11441 157 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 IL11P20809 199 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 MAPK4P31152 587 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 IL13P35225 146 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 MC3RP41968 323 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 DGKEP52429 567 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 RARSP54136 660 aaKnown RBP4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 NPEPPSP55786 919 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 ADAM17P78536 824 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 IFI35P80217 286 aaPredicted RBP4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 ATP2C1P98194 919 aaPredicted RBP4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 MC1RQ01726 317 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 TBL3Q12788 808 aaKnown RBP4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 EPS8Q12929 822 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 TBCEQ15813 527 aaPredicted RBP4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 FAM69AQ5T7M9 428 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 AGBL4Q5VU57 503 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 LIPMQ5VYY2 423 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 LAYNQ6UX15 382 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 USP30Q70CQ3 517 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 GET4Q7L5D6 327 aaPredicted RBP4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 PXKQ7Z7A4 578 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 TRABD2AQ86V40 505 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 VSIG1Q86XK7 387 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 TEX11Q8IYF3 940 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 CCDC105Q8IYK2 499 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 CNPY4Q8N129 248 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 ANKRD44Q8N8A2 993 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 FSIP1Q8NA03 581 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 SLC35B2Q8TB61 432 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 ETNPPLQ8TBG4 499 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 BPIFB1Q8TDL5 484 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 AFAP1L1Q8TED9 768 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 SLC22A17Q8WUG5 538 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 TBC1D5Q92609 795 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 STAMQ92783 540 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 KLHL32Q96NJ5 620 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 SLC46A1Q96NT5 459 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 SMOQ99835 787 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 VKORC1Q9BQB6 163 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 SYT3Q9BQG1 590 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 ITPAQ9BY32 194 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 TRIM5Q9C035 493 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 TTYH3Q9C0H2 523 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 VEZTQ9HBM0 779 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 SEPT11Q9NVA2 429 aaKnown RBP4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 PPP1R14DQ9NXH3 145 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 DNAJB11Q9UBS4 358 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 RPS6KA6Q9UK32 745 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 USP22Q9UPT9 525 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 NAALADL1Q9UQQ1 740 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 USP15Q9Y4E8 981 aaPredicted RBP4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 LYVE1Q9Y5Y7 322 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 PNPLA7Q6ZV29 1317 aa4.1□□□□□ -1.75
RNU6-1249P-201ENST00000363237 TBKBP1A7MCY6 615 aa4.09□□□□□ -1.75
RNU6-1249P-201ENST00000363237 DCLK1O15075 740 aa4.09□□□□□ -1.75
RNU6-1249P-201ENST00000363237 RPP40O75818 363 aaKnown RBP4.09□□□□□ -1.75
RNU6-1249P-201ENST00000363237 CCNDBP1O95273 360 aa4.09□□□□□ -1.75
RNU6-1249P-201ENST00000363237 MED26O95402 600 aa4.09□□□□□ -1.75
RNU6-1249P-201ENST00000363237 ADRB2P07550 413 aa4.09□□□□□ -1.75
RNU6-1249P-201ENST00000363237 ATF2P15336 505 aa4.09□□□□□ -1.75
RNU6-1249P-201ENST00000363237 ITGB5P18084 799 aa4.09□□□□□ -1.75
RNU6-1249P-201ENST00000363237 VIPR1P32241 457 aa4.09□□□□□ -1.75
RNU6-1249P-201ENST00000363237 MAGEA10P43363 369 aaPredicted RBP4.09□□□□□ -1.75
RNU6-1249P-201ENST00000363237 LOXL3P58215 753 aa4.09□□□□□ -1.75
RNU6-1249P-201ENST00000363237 RAP2BP61225 183 aa4.09□□□□□ -1.75
RNU6-1249P-201ENST00000363237 PLIN5Q00G26 463 aa4.09□□□□□ -1.75
RNU6-1249P-201ENST00000363237 PIGFQ07326 219 aa4.09□□□□□ -1.75
RNU6-1249P-201ENST00000363237 SF3A3Q12874 501 aaKnown RBP eCLIP4.09□□□□□ -1.75
RNU6-1249P-201ENST00000363237 DCTN1Q14203 1278 aa4.09□□□□□ -1.75
RNU6-1249P-201ENST00000363237 RASA2Q15283 850 aa4.09□□□□□ -1.75
RNU6-1249P-201ENST00000363237 NFIL3Q16649 462 aa4.09□□□□□ -1.75
RNU6-1249P-201ENST00000363237 BMT2Q1RMZ1 405 aa4.09□□□□□ -1.75
RNU6-1249P-201ENST00000363237 PRICKLE4Q2TBC4 344 aa4.09□□□□□ -1.75
RNU6-1249P-201ENST00000363237 CCDC92Q53HC0 331 aaPredicted RBP4.09□□□□□ -1.75
RNU6-1249P-201ENST00000363237 ZMAT1Q5H9K5 638 aa4.09□□□□□ -1.75
RNU6-1249P-201ENST00000363237 ZNF569Q5MCW4 686 aa4.09□□□□□ -1.75
RNU6-1249P-201ENST00000363237 CBWD5Q5RIA9 395 aa4.09□□□□□ -1.75
RNU6-1249P-201ENST00000363237 KRTAP5-3Q6L8H2 238 aa4.09□□□□□ -1.75
RNU6-1249P-201ENST00000363237 NAA16Q6N069 864 aaPredicted RBP4.09□□□□□ -1.75
RNU6-1249P-201ENST00000363237 RPUSD3Q6P087 351 aaKnown RBP4.09□□□□□ -1.75
RNU6-1249P-201ENST00000363237 ZNF280BQ86YH2 543 aa4.09□□□□□ -1.75
RNU6-1249P-201ENST00000363237 SPARTQ8N0X7 666 aa4.09□□□□□ -1.75
RNU6-1249P-201ENST00000363237 TAGAPQ8N103 731 aa4.09□□□□□ -1.75
RNU6-1249P-201ENST00000363237 GALNT4Q8N4A0 578 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms