RNA–Protein interactions for RNA: ENST00000362700.1

RNU6-228P-201, Transcript of RNA, U6 small nuclear 228, pseudogene, humanhuman

BASIC

Gene RNU6-228P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-228P-201ENST00000362700 MVB12BQ9H7P6 319 aa0.25□□□□□ -2.37
RNU6-228P-201ENST00000362700 RBM12Q9NTZ6 932 aaKnown RBP0.25□□□□□ -2.37
RNU6-228P-201ENST00000362700 NUMBLQ9Y6R0 609 aa0.25□□□□□ -2.37
RNU6-228P-201ENST00000362700 FSIP2Q5CZC0 6907 aa0.24□□□□□ -2.37
RNU6-228P-201ENST00000362700 KMT2DO14686 5537 aa0.24□□□□□ -2.37
RNU6-228P-201ENST00000362700 A0A0J9YWU9 116 aa0.24□□□□□ -2.37
RNU6-228P-201ENST00000362700 C2CD4BA6NLJ0 364 aa0.24□□□□□ -2.37
RNU6-228P-201ENST00000362700 SMAD7O15105 426 aaKnown RBP0.24□□□□□ -2.37
RNU6-228P-201ENST00000362700 ATG13O75143 517 aa0.24□□□□□ -2.37
RNU6-228P-201ENST00000362700 SOAT2O75908 522 aa0.24□□□□□ -2.37
RNU6-228P-201ENST00000362700 MT-CO3P00414 261 aa0.24□□□□□ -2.37
RNU6-228P-201ENST00000362700 TACR3P29371 465 aa0.24□□□□□ -2.37
RNU6-228P-201ENST00000362700 HOXD3P31249 432 aaPredicted RBP0.24□□□□□ -2.37
RNU6-228P-201ENST00000362700 TRAF2Q12933 501 aa0.24□□□□□ -2.37
RNU6-228P-201ENST00000362700 EARS2Q5JPH6 523 aaKnown RBP0.24□□□□□ -2.37
RNU6-228P-201ENST00000362700 GPR158Q5T848 1215 aa0.24□□□□□ -2.37
RNU6-228P-201ENST00000362700 Q6ZVL8 140 aa0.24□□□□□ -2.37
RNU6-228P-201ENST00000362700 LRRC47Q8N1G4 583 aaKnown RBP0.24□□□□□ -2.37
RNU6-228P-201ENST00000362700 FAM109AQ8N4B1 249 aa0.24□□□□□ -2.37
RNU6-228P-201ENST00000362700 MSI2Q96DH6 328 aaKnown RBP0.24□□□□□ -2.37
RNU6-228P-201ENST00000362700 IPO9Q96P70 1041 aaKnown RBP0.24□□□□□ -2.37
RNU6-228P-201ENST00000362700 ELF4Q99607 663 aaPredicted RBP0.24□□□□□ -2.37
RNU6-228P-201ENST00000362700 IMPG2Q9BZV3 1241 aa0.24□□□□□ -2.37
RNU6-228P-201ENST00000362700 BCL11AQ9H165 835 aa0.24□□□□□ -2.37
RNU6-228P-201ENST00000362700 PTGDR2Q9Y5Y4 395 aa0.24□□□□□ -2.37
RNU6-228P-201ENST00000362700 ITGB4P16144 1822 aa0.24□□□□□ -2.37
RNU6-228P-201ENST00000362700 INAFM1C9JVW0 142 aa0.23□□□□□ -2.37
RNU6-228P-201ENST00000362700 POLRMTO00411 1230 aaKnown RBP0.23□□□□□ -2.37
RNU6-228P-201ENST00000362700 INPPL1O15357 1258 aa0.23□□□□□ -2.37
RNU6-228P-201ENST00000362700 SLC43A1O75387 559 aa0.23□□□□□ -2.37
RNU6-228P-201ENST00000362700 SLC22A3O75751 556 aa0.23□□□□□ -2.37
RNU6-228P-201ENST00000362700 IGKV3-15P01624 115 aa0.23□□□□□ -2.37
RNU6-228P-201ENST00000362700 MYCLP12524 364 aaPredicted RBP0.23□□□□□ -2.37
RNU6-228P-201ENST00000362700 CD40P25942 277 aa0.23□□□□□ -2.37
RNU6-228P-201ENST00000362700 MECP2P51608 486 aaKnown RBP0.23□□□□□ -2.37
RNU6-228P-201ENST00000362700 PPIGQ13427 754 aaKnown RBP eCLIP0.23□□□□□ -2.37
RNU6-228P-201ENST00000362700 MRPL58Q14197 206 aaKnown RBP0.23□□□□□ -2.37
RNU6-228P-201ENST00000362700 LARS2Q15031 903 aaKnown RBP0.23□□□□□ -2.37
RNU6-228P-201ENST00000362700 PLCB4Q15147 1175 aa0.23□□□□□ -2.37
RNU6-228P-201ENST00000362700 ST3GAL2Q16842 350 aa0.23□□□□□ -2.37
RNU6-228P-201ENST00000362700 LONRF2Q1L5Z9 754 aa0.23□□□□□ -2.37
RNU6-228P-201ENST00000362700 TNNI3KQ59H18 835 aa0.23□□□□□ -2.37
RNU6-228P-201ENST00000362700 CC2D1BQ5T0F9 858 aaKnown RBP0.23□□□□□ -2.37
RNU6-228P-201ENST00000362700 FAM180AQ6UWF9 173 aa0.23□□□□□ -2.37
RNU6-228P-201ENST00000362700 SLC30A10Q6XR72 485 aa0.23□□□□□ -2.37
RNU6-228P-201ENST00000362700 SPATA20Q8TB22 786 aa0.23□□□□□ -2.37
RNU6-228P-201ENST00000362700 GRAPLQ8TC17 118 aaPredicted RBP0.23□□□□□ -2.37
RNU6-228P-201ENST00000362700 RASGRP4Q8TDF6 673 aa0.23□□□□□ -2.37
RNU6-228P-201ENST00000362700 GPRASP2Q96D09 838 aa0.23□□□□□ -2.37
RNU6-228P-201ENST00000362700 R3HDM4Q96D70 268 aa0.23□□□□□ -2.37
RNU6-228P-201ENST00000362700 RNPC3Q96LT9 517 aaKnown RBP0.23□□□□□ -2.37
RNU6-228P-201ENST00000362700 MAGEB10Q96LZ2 347 aaPredicted RBP0.23□□□□□ -2.37
RNU6-228P-201ENST00000362700 CDC6Q99741 560 aa0.23□□□□□ -2.37
RNU6-228P-201ENST00000362700 PDZD7Q9H5P4 517 aa0.23□□□□□ -2.37
RNU6-228P-201ENST00000362700 GLOD4Q9HC38 313 aa0.23□□□□□ -2.37
RNU6-228P-201ENST00000362700 TOMM22Q9NS69 142 aa0.23□□□□□ -2.37
RNU6-228P-201ENST00000362700 DLGAP4Q9Y2H0 992 aa0.23□□□□□ -2.37
RNU6-228P-201ENST00000362700 WBP11Q9Y2W2 641 aaKnown RBP0.23□□□□□ -2.37
RNU6-228P-201ENST00000362700 PRSS38A1L453 326 aa0.22□□□□□ -2.37
RNU6-228P-201ENST00000362700 KLHL33A6NCF5 533 aa0.22□□□□□ -2.37
RNU6-228P-201ENST00000362700 FGF5P12034 268 aa0.22□□□□□ -2.37
RNU6-228P-201ENST00000362700 DAOP14920 347 aa0.22□□□□□ -2.37
RNU6-228P-201ENST00000362700 RANGAP1P46060 587 aaPredicted RBP0.22□□□□□ -2.37
RNU6-228P-201ENST00000362700 IRX1P78414 480 aaPredicted RBP0.22□□□□□ -2.37
RNU6-228P-201ENST00000362700 HLFQ16534 295 aa0.22□□□□□ -2.37
RNU6-228P-201ENST00000362700 PLEKHO1Q53GL0 409 aaPredicted RBP0.22□□□□□ -2.37
RNU6-228P-201ENST00000362700 DACT2Q5SW24 774 aa0.22□□□□□ -2.37
RNU6-228P-201ENST00000362700 VSTM1Q6UX27 236 aa0.22□□□□□ -2.37
RNU6-228P-201ENST00000362700 TMEM64Q6YI46 380 aa0.22□□□□□ -2.37
RNU6-228P-201ENST00000362700 ZNF440Q8IYI8 595 aa0.22□□□□□ -2.37
RNU6-228P-201ENST00000362700 GPR156Q8NFN8 814 aa0.22□□□□□ -2.37
RNU6-228P-201ENST00000362700 FGFBP3Q8TAT2 258 aa0.22□□□□□ -2.37
RNU6-228P-201ENST00000362700 FAM76AQ8TAV0 307 aa0.22□□□□□ -2.37
RNU6-228P-201ENST00000362700 RIN2Q8WYP3 895 aaPredicted RBP0.22□□□□□ -2.37
RNU6-228P-201ENST00000362700 ZNF501Q96CX3 271 aaPredicted RBP0.22□□□□□ -2.37
RNU6-228P-201ENST00000362700 TRMT61AQ96FX7 289 aaKnown RBP0.22□□□□□ -2.37
RNU6-228P-201ENST00000362700 LITAFQ99732 161 aa0.22□□□□□ -2.37
RNU6-228P-201ENST00000362700 RTBDNQ9BSG5 229 aaPredicted RBP0.22□□□□□ -2.37
RNU6-228P-201ENST00000362700 PPP1R1BQ9UD71 204 aaPredicted RBP0.22□□□□□ -2.37
RNU6-228P-201ENST00000362700 CDY2AQ9Y6F7 541 aa0.22□□□□□ -2.37
RNU6-228P-201ENST00000362700 ABCA7Q8IZY2 2146 aa0.22□□□□□ -2.37
RNU6-228P-201ENST00000362700 TRBV23-1A0A0A0MS06 115 aa0.21□□□□□ -2.38
RNU6-228P-201ENST00000362700 A0A1B0GVT2 93 aa0.21□□□□□ -2.38
RNU6-228P-201ENST00000362700 A1L4Q6 167 aa0.21□□□□□ -2.38
RNU6-228P-201ENST00000362700 PTPDC1A2A3K4 754 aa0.21□□□□□ -2.38
RNU6-228P-201ENST00000362700 P2RY10O00398 339 aa0.21□□□□□ -2.38
RNU6-228P-201ENST00000362700 GPR32O75388 356 aa0.21□□□□□ -2.38
RNU6-228P-201ENST00000362700 FOXH1O75593 365 aa0.21□□□□□ -2.38
RNU6-228P-201ENST00000362700 TCEA3O75764 348 aa0.21□□□□□ -2.38
RNU6-228P-201ENST00000362700 PCSK1P29120 753 aa0.21□□□□□ -2.38
RNU6-228P-201ENST00000362700 TBX2Q13207 712 aaPredicted RBP0.21□□□□□ -2.38
RNU6-228P-201ENST00000362700 TMEM63BQ5T3F8 832 aa0.21□□□□□ -2.38
RNU6-228P-201ENST00000362700 NAGSQ8N159 534 aa0.21□□□□□ -2.38
RNU6-228P-201ENST00000362700 CHST14Q8NCH0 376 aa0.21□□□□□ -2.38
RNU6-228P-201ENST00000362700 SLC17A8Q8NDX2 589 aa0.21□□□□□ -2.38
RNU6-228P-201ENST00000362700 C7orf57Q8NEG2 295 aa0.21□□□□□ -2.38
RNU6-228P-201ENST00000362700 BCAS4Q8TDM0 211 aa0.21□□□□□ -2.38
RNU6-228P-201ENST00000362700 ZNF721Q8TF20 911 aa0.21□□□□□ -2.38
RNU6-228P-201ENST00000362700 CD101Q93033 1021 aa0.21□□□□□ -2.38
RNU6-228P-201ENST00000362700 RFT1Q96AA3 541 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms