RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 MAP3K2Q9Y2U5 619 aa4.34□□□□□ -1.71
RNU6-28P-201ENST00000362378 TCAF1Q9Y4C2 921 aa4.34□□□□□ -1.71
RNU6-28P-201ENST00000362378 SNX14Q9Y5W7 946 aa4.34□□□□□ -1.71
RNU6-28P-201ENST00000362378 TMEM200CA6NKL6 621 aa4.33□□□□□ -1.72
RNU6-28P-201ENST00000362378 B9A039 149 aa4.33□□□□□ -1.72
RNU6-28P-201ENST00000362378 PRRT4C9JH25 899 aa4.33□□□□□ -1.72
RNU6-28P-201ENST00000362378 J3KTA2 159 aa4.33□□□□□ -1.72
RNU6-28P-201ENST00000362378 AGPSO00116 658 aa4.33□□□□□ -1.72
RNU6-28P-201ENST00000362378 SNX2O60749 519 aa4.33□□□□□ -1.72
RNU6-28P-201ENST00000362378 CBFA2T3O75081 653 aa4.33□□□□□ -1.72
RNU6-28P-201ENST00000362378 CDKL5O76039 1030 aa4.33□□□□□ -1.72
RNU6-28P-201ENST00000362378 AGR2O95994 175 aa4.33□□□□□ -1.72
RNU6-28P-201ENST00000362378 PYGLP06737 847 aa4.33□□□□□ -1.72
RNU6-28P-201ENST00000362378 CKMT1AP12532 417 aa4.33□□□□□ -1.72
RNU6-28P-201ENST00000362378 GYS1P13807 737 aa4.33□□□□□ -1.72
RNU6-28P-201ENST00000362378 ZFP36P26651 326 aaKnown RBP4.33□□□□□ -1.72
RNU6-28P-201ENST00000362378 NTSR1P30989 418 aa4.33□□□□□ -1.72
RNU6-28P-201ENST00000362378 HTR7P34969 479 aa4.33□□□□□ -1.72
RNU6-28P-201ENST00000362378 ZEB1P37275 1124 aaPredicted RBP4.33□□□□□ -1.72
RNU6-28P-201ENST00000362378 TIRAPP58753 221 aa4.33□□□□□ -1.72
RNU6-28P-201ENST00000362378 SCAPQ12770 1279 aa4.33□□□□□ -1.72
RNU6-28P-201ENST00000362378 RESTQ13127 1097 aa4.33□□□□□ -1.72
RNU6-28P-201ENST00000362378 TBX2Q13207 712 aaPredicted RBP4.33□□□□□ -1.72
RNU6-28P-201ENST00000362378 CLCA4Q14CN2 919 aa4.33□□□□□ -1.72
RNU6-28P-201ENST00000362378 R3HDM1Q15032 1099 aaKnown RBP4.33□□□□□ -1.72
RNU6-28P-201ENST00000362378 TAF12Q16514 161 aa4.33□□□□□ -1.72
RNU6-28P-201ENST00000362378 INTS11Q5TA45 600 aaKnown RBP4.33□□□□□ -1.72
RNU6-28P-201ENST00000362378 JAKMIP3Q5VZ66 844 aa4.33□□□□□ -1.72
RNU6-28P-201ENST00000362378 SUN3Q8TAQ9 357 aa4.33□□□□□ -1.72
RNU6-28P-201ENST00000362378 OSCP1Q8WVF1 389 aa4.33□□□□□ -1.72
RNU6-28P-201ENST00000362378 ATG4AQ8WYN0 398 aa4.33□□□□□ -1.72
RNU6-28P-201ENST00000362378 RUBCNQ92622 972 aa4.33□□□□□ -1.72
RNU6-28P-201ENST00000362378 MYEOVQ96EZ4 313 aa4.33□□□□□ -1.72
RNU6-28P-201ENST00000362378 ZBTB45Q96K62 511 aaPredicted RBP4.33□□□□□ -1.72
RNU6-28P-201ENST00000362378 ADAM2Q99965 735 aa4.33□□□□□ -1.72
RNU6-28P-201ENST00000362378 VN1R3Q9BXE9 311 aa4.33□□□□□ -1.72
RNU6-28P-201ENST00000362378 TWSG1Q9GZX9 223 aa4.33□□□□□ -1.72
RNU6-28P-201ENST00000362378 DEF6Q9H4E7 631 aa4.33□□□□□ -1.72
RNU6-28P-201ENST00000362378 EPS8L2Q9H6S3 715 aa4.33□□□□□ -1.72
RNU6-28P-201ENST00000362378 TRIM36Q9NQ86 728 aa4.33□□□□□ -1.72
RNU6-28P-201ENST00000362378 FSCN3Q9NQT6 498 aa4.33□□□□□ -1.72
RNU6-28P-201ENST00000362378 RIMKLBQ9ULI2 386 aa4.33□□□□□ -1.72
RNU6-28P-201ENST00000362378 TRGV11A0A075B6L2 103 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 PNMA6EA0A0J9YXQ4 647 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 FAM90A18PA6NE21 464 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 FAM90A16PA6NEW6 464 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 RRN3P2A6NIE6 340 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 FAM90A9PA6NNJ1 464 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 FAM90A5PA8MXJ8 464 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 PLSCR1O15162 318 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 ZSCAN9O15535 394 aaPredicted RBP4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 NDUFA10O95299 355 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 PRKCBP05771 671 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 FAM90A15PP0C7V4 464 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 FAM90A14PP0C7W9 464 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 NR4A1P22736 598 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 DDX6P26196 483 aaKnown RBP eCLIP4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 KLRK1P26718 216 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 RBL1P28749 1068 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 DDIT3P35638 169 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 CDK7P50613 346 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 ATXN1P54253 815 aaKnown RBP4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 SP2Q02086 613 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 GRM4Q14833 912 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 ACOX1Q15067 660 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 FAM110CQ1W6H9 321 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 DEPDC1Q5TB30 811 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 RINT1Q6NUQ1 792 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 NFRKBQ6P4R8 1299 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 RAB11FIP2Q7L804 512 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 IZUMO1Q8IYV9 350 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 NAXEQ8NCW5 288 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 SIMC1Q8NDZ2 872 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 CPEB3Q8NE35 698 aaKnown RBP4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 OR6Y1Q8NGX8 325 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 WDR60Q8WVS4 1066 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 ATRIPQ8WXE1 791 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 RILPL2Q969X0 211 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 PPM1MQ96MI6 270 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 GPR20Q99678 358 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 PYM1Q9BRP8 204 aaKnown RBP4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 C17orf80Q9BSJ5 609 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 CEP72Q9P209 647 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 FEM1BQ9UK73 627 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 DAPP1Q9UN19 280 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 USP22Q9UPT9 525 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 SLC27A6Q9Y2P4 619 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 TESMINQ9Y4I5 508 aa4.32□□□□□ -1.72
RNU6-28P-201ENST00000362378 A0A0G2JLL6 359 aaPredicted RBP4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 HMX3A6NHT5 357 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 H0Y3Z8 333 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 EYA2O00167 538 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 PPM1DO15297 605 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 PROM1O43490 865 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 FAM20BO75063 409 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 TAF5LO75529 589 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 TK1P04183 234 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 PPP3CBP16298 524 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 HOXA5P20719 270 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 PAPOLAP51003 745 aaKnown RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms