RNA–Protein interactions for RNA: ENST00000362031.8

SNX6-201, Transcript of sorting nexin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX6, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-201ENST00000362031 VAV2P52735 878 aa11.32□□□□□ -0.6
SNX6-201ENST00000362031 RAB6CQ53S08 254 aa11.32□□□□□ -0.6
SNX6-201ENST00000362031 PPP1R15BQ5SWA1 713 aa11.32□□□□□ -0.6
SNX6-201ENST00000362031 OR6B2Q6IFH4 312 aa11.32□□□□□ -0.6
SNX6-201ENST00000362031 SCD5Q86SK9 330 aa11.32□□□□□ -0.6
SNX6-201ENST00000362031 HS6ST3Q8IZP7 471 aa11.32□□□□□ -0.6
SNX6-201ENST00000362031 EMC1Q8N766 993 aa11.32□□□□□ -0.6
SNX6-201ENST00000362031 MCRS1Q96EZ8 462 aa11.32□□□□□ -0.6
SNX6-201ENST00000362031 SPATA17Q96L03 361 aa11.32□□□□□ -0.6
SNX6-201ENST00000362031 DNAI2Q9GZS0 605 aa11.32□□□□□ -0.6
SNX6-201ENST00000362031 RAB6CQ9H0N0 254 aa11.32□□□□□ -0.6
SNX6-201ENST00000362031 SYNCQ9H7C4 482 aa11.32□□□□□ -0.6
SNX6-201ENST00000362031 NMUR1Q9HB89 426 aa11.32□□□□□ -0.6
SNX6-201ENST00000362031 ZNF334Q9HCZ1 680 aaPredicted RBP11.32□□□□□ -0.6
SNX6-201ENST00000362031 LZTFL1Q9NQ48 299 aa11.32□□□□□ -0.6
SNX6-201ENST00000362031 HCFC1R1Q9NWW0 138 aa11.32□□□□□ -0.6
SNX6-201ENST00000362031 IL37Q9NZH6 218 aa11.32□□□□□ -0.6
SNX6-201ENST00000362031 MAGED2Q9UNF1 606 aaPredicted RBP11.32□□□□□ -0.6
SNX6-201ENST00000362031 PAXBP1Q9Y5B6 917 aa11.32□□□□□ -0.6
SNX6-201ENST00000362031 NOTCH4Q99466 2003 aa11.32□□□□□ -0.6
SNX6-201ENST00000362031 ATP8B3O60423 1300 aa11.32□□□□□ -0.6
SNX6-201ENST00000362031 A0A0C4DFX4 3053 aa11.32□□□□□ -0.6
SNX6-201ENST00000362031 TRIOO75962 3097 aa11.32□□□□□ -0.6
SNX6-201ENST00000362031 TRIM66O15016 1216 aa11.31□□□□□ -0.6
SNX6-201ENST00000362031 CCL16O15467 120 aa11.31□□□□□ -0.6
SNX6-201ENST00000362031 CYP1A2P05177 515 aa11.31□□□□□ -0.6
SNX6-201ENST00000362031 TMEM253P0C7T8 217 aa11.31□□□□□ -0.6
SNX6-201ENST00000362031 TFE3P19532 575 aaPredicted RBP11.31□□□□□ -0.6
SNX6-201ENST00000362031 ELF1P32519 619 aa11.31□□□□□ -0.6
SNX6-201ENST00000362031 TUFMP49411 452 aaKnown RBP11.31□□□□□ -0.6
SNX6-201ENST00000362031 DAOAP59103 153 aa11.31□□□□□ -0.6
SNX6-201ENST00000362031 GPC5P78333 572 aa11.31□□□□□ -0.6
SNX6-201ENST00000362031 PITX1P78337 314 aaPredicted RBP11.31□□□□□ -0.6
SNX6-201ENST00000362031 OGDHQ02218 1023 aa11.31□□□□□ -0.6
SNX6-201ENST00000362031 DLX2Q07687 328 aaPredicted RBP11.31□□□□□ -0.6
SNX6-201ENST00000362031 HS1BP3Q53T59 392 aa11.31□□□□□ -0.6
SNX6-201ENST00000362031 PM20D1Q6GTS8 502 aa11.31□□□□□ -0.6
SNX6-201ENST00000362031 PLEKHA7Q6IQ23 1121 aa11.31□□□□□ -0.6
SNX6-201ENST00000362031 DENND5BQ6ZUT9 1274 aa11.31□□□□□ -0.6
SNX6-201ENST00000362031 DNAJB7Q7Z6W7 309 aaPredicted RBP11.31□□□□□ -0.6
SNX6-201ENST00000362031 TMEM150AQ86TG1 271 aa11.31□□□□□ -0.6
SNX6-201ENST00000362031 NUP93Q8N1F7 819 aa11.31□□□□□ -0.6
SNX6-201ENST00000362031 GOLPH3Q9H4A6 298 aa11.31□□□□□ -0.6
SNX6-201ENST00000362031 LRRC4Q9HBW1 653 aa11.31□□□□□ -0.6
SNX6-201ENST00000362031 PNPLA8Q9NP80 782 aa11.31□□□□□ -0.6
SNX6-201ENST00000362031 CALCOCO1Q9P1Z2 691 aa11.31□□□□□ -0.6
SNX6-201ENST00000362031 NCANO14594 1321 aa11.31□□□□□ -0.6
SNX6-201ENST00000362031 ZBED1O96006 694 aa11.31□□□□□ -0.6
SNX6-201ENST00000362031 CCDC175P0C221 793 aa11.31□□□□□ -0.6
SNX6-201ENST00000362031 RFC1P35251 1148 aaPredicted RBP11.31□□□□□ -0.6
SNX6-201ENST00000362031 FLT3P36888 993 aa11.31□□□□□ -0.6
SNX6-201ENST00000362031 SLC8A3P57103 927 aa11.31□□□□□ -0.6
SNX6-201ENST00000362031 RNASE9P60153 205 aaKnown RBP11.31□□□□□ -0.6
SNX6-201ENST00000362031 MRPS5P82675 430 aaKnown RBP11.31□□□□□ -0.6
SNX6-201ENST00000362031 ZNF252P-AS1Q0IIN9 211 aa11.31□□□□□ -0.6
SNX6-201ENST00000362031 TAF10Q12962 218 aa11.31□□□□□ -0.6
SNX6-201ENST00000362031 PTPROQ16827 1216 aa11.31□□□□□ -0.6
SNX6-201ENST00000362031 HABP4Q5JVS0 413 aaKnown RBP11.31□□□□□ -0.6
SNX6-201ENST00000362031 DAB2IPQ5VWQ8 1189 aa11.31□□□□□ -0.6
SNX6-201ENST00000362031 POTEHQ6S545 545 aa11.31□□□□□ -0.6
SNX6-201ENST00000362031 CCAR2Q8N163 923 aaKnown RBP11.31□□□□□ -0.6
SNX6-201ENST00000362031 SLC35G2Q8TBE7 412 aa11.31□□□□□ -0.6
SNX6-201ENST00000362031 ZNF707Q96C28 371 aaPredicted RBP11.31□□□□□ -0.6
SNX6-201ENST00000362031 NOX5Q96PH1 765 aa11.31□□□□□ -0.6
SNX6-201ENST00000362031 APOL5Q9BWW9 433 aa11.31□□□□□ -0.6
SNX6-201ENST00000362031 LRRC3Q9BY71 257 aa11.31□□□□□ -0.6
SNX6-201ENST00000362031 NSUN3Q9H649 340 aaKnown RBP11.31□□□□□ -0.6
SNX6-201ENST00000362031 GMIPQ9P107 970 aa11.31□□□□□ -0.6
SNX6-201ENST00000362031 HSFX1Q9UBD0 423 aa11.31□□□□□ -0.6
SNX6-201ENST00000362031 TMEM59LQ9UK28 342 aa11.31□□□□□ -0.6
SNX6-201ENST00000362031 NUDT5Q9UKK9 219 aa11.31□□□□□ -0.6
SNX6-201ENST00000362031 ZKSCAN5Q9Y2L8 839 aa11.31□□□□□ -0.6
SNX6-201ENST00000362031 FAM92AA1XBS5 289 aa11.3□□□□□ -0.6
SNX6-201ENST00000362031 PJA2O43164 708 aa11.3□□□□□ -0.6
SNX6-201ENST00000362031 BUB1O43683 1085 aa11.3□□□□□ -0.6
SNX6-201ENST00000362031 RRP9O43818 475 aaKnown RBP11.3□□□□□ -0.6
SNX6-201ENST00000362031 TADA3O75528 432 aa11.3□□□□□ -0.6
SNX6-201ENST00000362031 ZMYND10O75800 440 aa11.3□□□□□ -0.6
SNX6-201ENST00000362031 CALB1P05937 261 aa11.3□□□□□ -0.6
SNX6-201ENST00000362031 IGFBP4P22692 258 aa11.3□□□□□ -0.6
SNX6-201ENST00000362031 CCR2P41597 374 aa11.3□□□□□ -0.6
SNX6-201ENST00000362031 ALDH1A3P47895 512 aa11.3□□□□□ -0.6
SNX6-201ENST00000362031 RPL10AP62906 217 aaKnown RBP11.3□□□□□ -0.6
SNX6-201ENST00000362031 KRT83P78385 493 aa11.3□□□□□ -0.6
SNX6-201ENST00000362031 NTHL1P78549 312 aa11.3□□□□□ -0.6
SNX6-201ENST00000362031 SLC6A3Q01959 620 aa11.3□□□□□ -0.6
SNX6-201ENST00000362031 ZNF268Q14587 947 aaPredicted RBP11.3□□□□□ -0.6
SNX6-201ENST00000362031 FAM102AQ5T9C2 384 aaPredicted RBP11.3□□□□□ -0.6
SNX6-201ENST00000362031 SH3PXD2AQ5TCZ1 1133 aa11.3□□□□□ -0.6
SNX6-201ENST00000362031 SYPL2Q5VXT5 272 aa11.3□□□□□ -0.6
SNX6-201ENST00000362031 KIAA1328Q86T90 577 aa11.3□□□□□ -0.6
SNX6-201ENST00000362031 SIX6OS1Q8N1H7 587 aa11.3□□□□□ -0.6
SNX6-201ENST00000362031 EDEM1Q92611 657 aa11.3□□□□□ -0.6
SNX6-201ENST00000362031 PSMG2Q969U7 264 aa11.3□□□□□ -0.6
SNX6-201ENST00000362031 TRIM44Q96DX7 344 aaPredicted RBP11.3□□□□□ -0.6
SNX6-201ENST00000362031 VCPIP1Q96JH7 1222 aa11.3□□□□□ -0.6
SNX6-201ENST00000362031 MCEEQ96PE7 176 aa11.3□□□□□ -0.6
SNX6-201ENST00000362031 NUP85Q9BW27 656 aa11.3□□□□□ -0.6
SNX6-201ENST00000362031 IL21Q9HBE4 155 aa11.3□□□□□ -0.6
SNX6-201ENST00000362031 METTL5Q9NRN9 209 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms