RNA–Protein interactions for RNA: ENST00000361987.5

CNTF-201, Transcript of ciliary neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTF, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTF-201ENST00000361987 LSM8O95777 96 aaKnown RBP13.25□□□□□ -0.29
CNTF-201ENST00000361987 ZBED1O96006 694 aa13.25□□□□□ -0.29
CNTF-201ENST00000361987 F11P03951 625 aa13.25□□□□□ -0.29
CNTF-201ENST00000361987 SERPING1P05155 500 aa13.25□□□□□ -0.29
CNTF-201ENST00000361987 IL9P15248 144 aa13.25□□□□□ -0.29
CNTF-201ENST00000361987 GBP2P32456 591 aaPredicted RBP13.25□□□□□ -0.29
CNTF-201ENST00000361987 ACADSBP45954 432 aa13.25□□□□□ -0.29
CNTF-201ENST00000361987 MRE11P49959 708 aa13.25□□□□□ -0.29
CNTF-201ENST00000361987 PDCLQ13371 301 aa13.25□□□□□ -0.29
CNTF-201ENST00000361987 TEAD2Q15562 447 aa13.25□□□□□ -0.29
CNTF-201ENST00000361987 SMAD2Q15796 467 aaKnown RBP13.25□□□□□ -0.29
CNTF-201ENST00000361987 PRSS36Q5K4E3 855 aa13.25□□□□□ -0.29
CNTF-201ENST00000361987 NAA35Q5VZE5 725 aa13.25□□□□□ -0.29
CNTF-201ENST00000361987 HGSNATQ68CP4 663 aa13.25□□□□□ -0.29
CNTF-201ENST00000361987 SLC30A5Q8TAD4 765 aa13.25□□□□□ -0.29
CNTF-201ENST00000361987 SHKBP1Q8TBC3 707 aa13.25□□□□□ -0.29
CNTF-201ENST00000361987 STK32AQ8WU08 396 aa13.25□□□□□ -0.29
CNTF-201ENST00000361987 ATXN2LQ8WWM7 1075 aaKnown RBP13.25□□□□□ -0.29
CNTF-201ENST00000361987 NDRG1Q92597 394 aaKnown RBP13.25□□□□□ -0.29
CNTF-201ENST00000361987 CPXM1Q96SM3 734 aa13.25□□□□□ -0.29
CNTF-201ENST00000361987 ULBP1Q9BZM6 244 aa13.25□□□□□ -0.29
CNTF-201ENST00000361987 MIS12Q9H081 205 aa13.25□□□□□ -0.29
CNTF-201ENST00000361987 SLITRK6Q9H5Y7 841 aa13.25□□□□□ -0.29
CNTF-201ENST00000361987 AVENQ9NQS1 362 aaPredicted RBP13.25□□□□□ -0.29
CNTF-201ENST00000361987 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.25□□□□□ -0.29
CNTF-201ENST00000361987 TRPM5Q9NZQ8 1165 aa13.25□□□□□ -0.29
CNTF-201ENST00000361987 SCML2Q9UQR0 700 aa13.25□□□□□ -0.29
CNTF-201ENST00000361987 USP3Q9Y6I4 520 aa13.25□□□□□ -0.29
CNTF-201ENST00000361987 E5RJQ4 531 aa13.25□□□□□ -0.29
CNTF-201ENST00000361987 PLEKP08567 350 aaPredicted RBP13.25□□□□□ -0.29
CNTF-201ENST00000361987 CEBPBP17676 345 aa13.25□□□□□ -0.29
CNTF-201ENST00000361987 HNRNPH3P31942 346 aaKnown RBP13.25□□□□□ -0.29
CNTF-201ENST00000361987 CDH5P33151 784 aaPredicted RBP13.25□□□□□ -0.29
CNTF-201ENST00000361987 CYP4F8P98187 520 aa13.25□□□□□ -0.29
CNTF-201ENST00000361987 ARHGAP15Q53QZ3 475 aa13.25□□□□□ -0.29
CNTF-201ENST00000361987 TRIM72Q6ZMU5 477 aa13.25□□□□□ -0.29
CNTF-201ENST00000361987 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.25□□□□□ -0.29
CNTF-201ENST00000361987 TMEM110Q86TL2 294 aa13.25□□□□□ -0.29
CNTF-201ENST00000361987 ERICH1Q86X53 443 aa13.25□□□□□ -0.29
CNTF-201ENST00000361987 MRPS31Q92665 395 aaKnown RBP13.25□□□□□ -0.29
CNTF-201ENST00000361987 FGF13Q92913 245 aa13.25□□□□□ -0.29
CNTF-201ENST00000361987 RPGRIP1Q96KN7 1286 aa13.25□□□□□ -0.29
CNTF-201ENST00000361987 SLC4A5Q9BY07 1137 aa13.25□□□□□ -0.29
CNTF-201ENST00000361987 GMIPQ9P107 970 aa13.25□□□□□ -0.29
CNTF-201ENST00000361987 NOTCH4Q99466 2003 aa13.24□□□□□ -0.29
CNTF-201ENST00000361987 FAM92AA1XBS5 289 aa13.24□□□□□ -0.29
CNTF-201ENST00000361987 ZNF840PA6NDX5 716 aa13.24□□□□□ -0.29
CNTF-201ENST00000361987 MOSPD3O75425 235 aa13.24□□□□□ -0.29
CNTF-201ENST00000361987 CYP1A1P04798 512 aaPredicted RBP13.24□□□□□ -0.29
CNTF-201ENST00000361987 PPP3CCP48454 512 aa13.24□□□□□ -0.29
CNTF-201ENST00000361987 RPL34P49207 117 aaKnown RBP13.24□□□□□ -0.29
CNTF-201ENST00000361987 SNX16P57768 344 aa13.24□□□□□ -0.29
CNTF-201ENST00000361987 NOMO3P69849 1222 aa13.24□□□□□ -0.29
CNTF-201ENST00000361987 C2CD6Q53TS8 623 aa13.24□□□□□ -0.29
CNTF-201ENST00000361987 STXBP5Q5T5C0 1151 aa13.24□□□□□ -0.29
CNTF-201ENST00000361987 GPR158Q5T848 1215 aa13.24□□□□□ -0.29
CNTF-201ENST00000361987 TXNDC8Q6A555 127 aa13.24□□□□□ -0.29
CNTF-201ENST00000361987 WDR59Q6PJI9 974 aa13.24□□□□□ -0.29
CNTF-201ENST00000361987 CCDC186Q7Z3E2 898 aa13.24□□□□□ -0.29
CNTF-201ENST00000361987 VPS36Q86VN1 386 aa13.24□□□□□ -0.29
CNTF-201ENST00000361987 MON1AQ86VX9 555 aa13.24□□□□□ -0.29
CNTF-201ENST00000361987 MAB21L3Q8N8X9 362 aa13.24□□□□□ -0.29
CNTF-201ENST00000361987 TC2NQ8N9U0 490 aa13.24□□□□□ -0.29
CNTF-201ENST00000361987 PDZD8Q8NEN9 1154 aa13.24□□□□□ -0.29
CNTF-201ENST00000361987 MCRS1Q96EZ8 462 aa13.24□□□□□ -0.29
CNTF-201ENST00000361987 PHF7Q9BWX1 381 aaPredicted RBP13.24□□□□□ -0.29
CNTF-201ENST00000361987 TRPC7Q9HCX4 862 aa13.24□□□□□ -0.29
CNTF-201ENST00000361987 CNGB3Q9NQW8 809 aa13.24□□□□□ -0.29
CNTF-201ENST00000361987 TLR8Q9NR97 1041 aaKnown RBP13.24□□□□□ -0.29
CNTF-201ENST00000361987 TJP2Q9UDY2 1190 aa13.24□□□□□ -0.29
CNTF-201ENST00000361987 ADAMTS1Q9UHI8 967 aa13.24□□□□□ -0.29
CNTF-201ENST00000361987 GREB1Q4ZG55 1949 aa13.24□□□□□ -0.29
CNTF-201ENST00000361987 A0A1W2PQH9 124 aa13.23□□□□□ -0.29
CNTF-201ENST00000361987 TMCO5BA8MYB1 307 aa13.23□□□□□ -0.29
CNTF-201ENST00000361987 TADA3O75528 432 aa13.23□□□□□ -0.29
CNTF-201ENST00000361987 ERBB2P04626 1255 aa13.23□□□□□ -0.29
CNTF-201ENST00000361987 UNGP13051 313 aaPredicted RBP13.23□□□□□ -0.29
CNTF-201ENST00000361987 NSFP46459 744 aaKnown RBP13.23□□□□□ -0.29
CNTF-201ENST00000361987 PGFP49763 221 aa13.23□□□□□ -0.29
CNTF-201ENST00000361987 CLEC16AQ2KHT3 1053 aa13.23□□□□□ -0.29
CNTF-201ENST00000361987 PTPN20Q4JDL3 420 aa13.23□□□□□ -0.29
CNTF-201ENST00000361987 PM20D1Q6GTS8 502 aa13.23□□□□□ -0.29
CNTF-201ENST00000361987 OTOP3Q7RTS5 596 aa13.23□□□□□ -0.29
CNTF-201ENST00000361987 NPAS3Q8IXF0 933 aa13.23□□□□□ -0.29
CNTF-201ENST00000361987 IPO4Q8TEX9 1081 aaKnown RBP13.23□□□□□ -0.29
CNTF-201ENST00000361987 CLEC4CQ8WTT0 213 aa13.23□□□□□ -0.29
CNTF-201ENST00000361987 OVCA2Q8WZ82 227 aa13.23□□□□□ -0.29
CNTF-201ENST00000361987 C18orf8Q96DM3 657 aa13.23□□□□□ -0.29
CNTF-201ENST00000361987 ASB2Q96Q27 587 aa13.23□□□□□ -0.29
CNTF-201ENST00000361987 SYT11Q9BT88 431 aa13.23□□□□□ -0.29
CNTF-201ENST00000361987 ARHGAP20Q9P2F6 1191 aa13.23□□□□□ -0.29
CNTF-201ENST00000361987 IMPACTQ9P2X3 320 aa13.23□□□□□ -0.29
CNTF-201ENST00000361987 NAGPAQ9UK23 515 aa13.23□□□□□ -0.29
CNTF-201ENST00000361987 ZNF638Q14966 1978 aaKnown RBP13.23□□□□□ -0.29
CNTF-201ENST00000361987 C2orf78A6NCI8 922 aa13.23□□□□□ -0.29
CNTF-201ENST00000361987 GOLGA6L6A8MZA4 724 aa13.23□□□□□ -0.29
CNTF-201ENST00000361987 FBXO21O94952 628 aa13.23□□□□□ -0.29
CNTF-201ENST00000361987 ARID5BQ14865 1188 aa13.23□□□□□ -0.29
CNTF-201ENST00000361987 MSANTD4Q8NCY6 345 aa13.23□□□□□ -0.29
CNTF-201ENST00000361987 ANP32BQ92688 251 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms