RNA–Protein interactions for RNA: ENST00000361655.6

PCDH11X-202, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-202ENST00000361655 SLC6A3Q01959 620 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 ELAVL2Q12926 359 aaKnown RBP5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 CCDC142Q17RM4 750 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 SOWAHAQ2M3V2 549 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 IL31Q6EBC2 164 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 DCLRE1AQ6PJP8 1040 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 SLFN11Q7Z7L1 901 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 JAMLQ86YT9 394 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 CCDC13Q8IYE1 715 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 BBS5Q8N3I7 341 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 EMID1Q96A84 441 aaPredicted RBP5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 ERLEC1Q96DZ1 483 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 ZNF558Q96NG5 402 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 ADAMTS10Q9H324 1103 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 SP110Q9HB58 689 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 OGFRQ9NZT2 677 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 SIX4Q9UIU6 781 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 SF3B1O75533 1304 aaKnown RBP eCLIP5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 CITO14578 2027 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 O00370 1275 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 TSPAN3O60637 253 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 GPR32O75388 356 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 MBL2P11226 248 aaPredicted RBP5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 CHRNB2P17787 502 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 AMPD1P23109 780 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 JAM2P57087 298 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 OTUD4Q01804 1114 aaKnown RBP5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 POU5F1BQ06416 359 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 PDIA2Q13087 525 aaKnown RBP5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 PLD1Q13393 1074 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 ZNF268Q14587 947 aaPredicted RBP5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 TMED2Q15363 201 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 PCSK7Q16549 785 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 C1orf220Q5T0J3 134 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 PAPD7Q5XG87 772 aaKnown RBP5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 PRSS55Q6UWB4 352 aaPredicted RBP5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 BZW1Q7L1Q6 419 aaKnown RBP5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 PRUNE1Q86TP1 453 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 UNC93AQ86WB7 457 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 TTC30AQ86WT1 665 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 ZNF280BQ86YH2 543 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 ZBED8Q8IZ13 594 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 ANKRD52Q8NB46 1076 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 BBOF1Q8ND07 529 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 C3orf20Q8ND61 904 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 ACTL9Q8TC94 416 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 CCDC97Q96F63 343 aaPredicted RBP5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 PNKPQ96T60 521 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 NCAPGQ9BPX3 1015 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 KLC2Q9H0B6 622 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 STMN4Q9H169 189 aaPredicted RBP5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 COQ4Q9Y3A0 265 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 PHIPQ8WWQ0 1821 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 A0A0U1RQF3 1178 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 PJA2O43164 708 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 LTFP02788 710 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 ERBB2P04626 1255 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 CSF2RAP15509 400 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 RPL9P32969 192 aaKnown RBP5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 FLT3P36888 993 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 IRX4P78413 519 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 PDE1BQ01064 536 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 SOX4Q06945 474 aaPredicted RBP5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 MMRN1Q13201 1228 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 CCDC91Q7Z6B0 441 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 FAM35AQ86V20 835 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 TMEM86AQ8N2M4 240 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 FIBCD1Q8N539 461 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 OR2W6PQ8NHA6 318 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 BORCS6Q96GS4 357 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 SMYD2Q9NRG4 433 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 PIH1D1Q9NWS0 290 aaKnown RBP5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 TRPM5Q9NZQ8 1165 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 COG5Q9UP83 839 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 PLAAQ9Y263 795 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 SSX2IPQ9Y2D8 614 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 QSER1Q2KHR3 1735 aa5.73□□□□□ -1.49
PCDH11X-202ENST00000361655 EXOC1LA0A1B0GW35 172 aa5.72□□□□□ -1.49
PCDH11X-202ENST00000361655 RBM47A0AV96 593 aaKnown RBP5.72□□□□□ -1.49
PCDH11X-202ENST00000361655 FAM155AB1AL88 458 aaPredicted RBP5.72□□□□□ -1.49
PCDH11X-202ENST00000361655 MDM4O15151 490 aa5.72□□□□□ -1.49
PCDH11X-202ENST00000361655 PHF2O75151 1096 aa5.72□□□□□ -1.49
PCDH11X-202ENST00000361655 FGBP02675 491 aa5.72□□□□□ -1.49
PCDH11X-202ENST00000361655 RARAP10276 462 aa5.72□□□□□ -1.49
PCDH11X-202ENST00000361655 XPAP23025 273 aaPredicted RBP5.72□□□□□ -1.49
PCDH11X-202ENST00000361655 YWHAQP27348 245 aa5.72□□□□□ -1.49
PCDH11X-202ENST00000361655 TKTP29401 623 aaKnown RBP5.72□□□□□ -1.49
PCDH11X-202ENST00000361655 PHBP35232 272 aa5.72□□□□□ -1.49
PCDH11X-202ENST00000361655 COILP38432 576 aaPredicted RBP5.72□□□□□ -1.49
PCDH11X-202ENST00000361655 ASPAP45381 313 aa5.72□□□□□ -1.49
PCDH11X-202ENST00000361655 HARS2P49590 506 aaKnown RBP5.72□□□□□ -1.49
PCDH11X-202ENST00000361655 SLC12A2P55011 1212 aa5.72□□□□□ -1.49
PCDH11X-202ENST00000361655 TAS2R40P59535 323 aa5.72□□□□□ -1.49
PCDH11X-202ENST00000361655 RPL10AP62906 217 aaKnown RBP5.72□□□□□ -1.49
PCDH11X-202ENST00000361655 PSMD5Q16401 504 aa5.72□□□□□ -1.49
PCDH11X-202ENST00000361655 ARFGAP2Q8N6H7 521 aa5.72□□□□□ -1.49
PCDH11X-202ENST00000361655 PXYLP1Q8TE99 480 aa5.72□□□□□ -1.49
PCDH11X-202ENST00000361655 CLEC4CQ8WTT0 213 aa5.72□□□□□ -1.49
PCDH11X-202ENST00000361655 ALG3Q92685 438 aa5.72□□□□□ -1.49
PCDH11X-202ENST00000361655 RUNDC3BQ96NL0 473 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms