RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 TWNKQ96RR1 684 aa5.66□□□□□ -1.5
RPL39-201ENST00000361575 SORCS3Q9UPU3 1222 aa5.66□□□□□ -1.5
RPL39-201ENST00000361575 CNTN6Q9UQ52 1028 aa5.66□□□□□ -1.5
RPL39-201ENST00000361575 TMEM98Q9Y2Y6 226 aa5.66□□□□□ -1.5
RPL39-201ENST00000361575 NEU2Q9Y3R4 380 aa5.66□□□□□ -1.5
RPL39-201ENST00000361575 PNMA6EA0A0J9YXQ4 647 aa5.65□□□□□ -1.5
RPL39-201ENST00000361575 FAM90A20PA6NIJ5 464 aa5.65□□□□□ -1.5
RPL39-201ENST00000361575 PRSS47A8MTI9 375 aa5.65□□□□□ -1.5
RPL39-201ENST00000361575 DIRC3C9JPN6 131 aa5.65□□□□□ -1.5
RPL39-201ENST00000361575 ZSCAN9O15535 394 aaPredicted RBP5.65□□□□□ -1.5
RPL39-201ENST00000361575 PRICKLE3O43900 615 aaPredicted RBP5.65□□□□□ -1.5
RPL39-201ENST00000361575 VNN1O95497 513 aa5.65□□□□□ -1.5
RPL39-201ENST00000361575 CENPBP07199 599 aaPredicted RBP5.65□□□□□ -1.5
RPL39-201ENST00000361575 PDHA1P08559 390 aa5.65□□□□□ -1.5
RPL39-201ENST00000361575 CAPN3P20807 821 aa5.65□□□□□ -1.5
RPL39-201ENST00000361575 COMTP21964 271 aa5.65□□□□□ -1.5
RPL39-201ENST00000361575 ZFP36P26651 326 aaKnown RBP5.65□□□□□ -1.5
RPL39-201ENST00000361575 CD6P30203 668 aa5.65□□□□□ -1.5
RPL39-201ENST00000361575 MAN2A2P49641 1150 aa5.65□□□□□ -1.5
RPL39-201ENST00000361575 PAPOLAP51003 745 aaKnown RBP5.65□□□□□ -1.5
RPL39-201ENST00000361575 ACTR2P61160 394 aa5.65□□□□□ -1.5
RPL39-201ENST00000361575 TLE2Q04725 743 aa5.65□□□□□ -1.5
RPL39-201ENST00000361575 CCNIQ14094 377 aa5.65□□□□□ -1.5
RPL39-201ENST00000361575 E2F2Q14209 437 aa5.65□□□□□ -1.5
RPL39-201ENST00000361575 GALNTL6Q49A17 601 aa5.65□□□□□ -1.5
RPL39-201ENST00000361575 MSANTD2Q6P1R3 559 aa5.65□□□□□ -1.5
RPL39-201ENST00000361575 MICALCLQ6ZW33 695 aa5.65□□□□□ -1.5
RPL39-201ENST00000361575 RSRC2Q7L4I2 434 aaKnown RBP5.65□□□□□ -1.5
RPL39-201ENST00000361575 RAB11FIP2Q7L804 512 aa5.65□□□□□ -1.5
RPL39-201ENST00000361575 ANKS1BQ7Z6G8 1248 aa5.65□□□□□ -1.5
RPL39-201ENST00000361575 TBC1D1Q86TI0 1168 aaPredicted RBP5.65□□□□□ -1.5
RPL39-201ENST00000361575 Q8TCH9 128 aa5.65□□□□□ -1.5
RPL39-201ENST00000361575 ATG4AQ8WYN0 398 aa5.65□□□□□ -1.5
RPL39-201ENST00000361575 SDCCAG3Q96C92 435 aa5.65□□□□□ -1.5
RPL39-201ENST00000361575 HIST1H2AAQ96QV6 131 aa5.65□□□□□ -1.5
RPL39-201ENST00000361575 HAPLN3Q96S86 360 aa5.65□□□□□ -1.5
RPL39-201ENST00000361575 DCLRE1CQ96SD1 692 aaKnown RBP5.65□□□□□ -1.5
RPL39-201ENST00000361575 OSBPL9Q96SU4 736 aa5.65□□□□□ -1.5
RPL39-201ENST00000361575 MECRQ9BV79 373 aa5.65□□□□□ -1.5
RPL39-201ENST00000361575 AMBRA1Q9C0C7 1298 aa5.65□□□□□ -1.5
RPL39-201ENST00000361575 XYLT2Q9H1B5 865 aa5.65□□□□□ -1.5
RPL39-201ENST00000361575 SEPSECSQ9HD40 501 aaKnown RBP5.65□□□□□ -1.5
RPL39-201ENST00000361575 TRPM5Q9NZQ8 1165 aa5.65□□□□□ -1.5
RPL39-201ENST00000361575 SWAP70Q9UH65 585 aa5.65□□□□□ -1.5
RPL39-201ENST00000361575 EIF2B4Q9UI10 523 aaKnown RBP5.65□□□□□ -1.5
RPL39-201ENST00000361575 JAG2Q9Y219 1238 aa5.65□□□□□ -1.5
RPL39-201ENST00000361575 SLC27A6Q9Y2P4 619 aa5.65□□□□□ -1.5
RPL39-201ENST00000361575 MAP3K2Q9Y2U5 619 aa5.65□□□□□ -1.5
RPL39-201ENST00000361575 ZNF536O15090 1300 aa5.65□□□□□ -1.51
RPL39-201ENST00000361575 GOLGA6L6A8MZA4 724 aa5.64□□□□□ -1.51
RPL39-201ENST00000361575 KIF28PB7ZC32 967 aa5.64□□□□□ -1.51
RPL39-201ENST00000361575 F5H697 171 aa5.64□□□□□ -1.51
RPL39-201ENST00000361575 TRIM24O15164 1050 aa5.64□□□□□ -1.51
RPL39-201ENST00000361575 SNX2O60749 519 aa5.64□□□□□ -1.51
RPL39-201ENST00000361575 ERN1O75460 977 aaKnown RBP5.64□□□□□ -1.51
RPL39-201ENST00000361575 CER1O95813 267 aa5.64□□□□□ -1.51
RPL39-201ENST00000361575 ZSCAN22P10073 491 aaPredicted RBP5.64□□□□□ -1.51
RPL39-201ENST00000361575 RXRAP19793 462 aa5.64□□□□□ -1.51
RPL39-201ENST00000361575 ACO1P21399 889 aaKnown RBP5.64□□□□□ -1.51
RPL39-201ENST00000361575 RBL1P28749 1068 aa5.64□□□□□ -1.51
RPL39-201ENST00000361575 MAGEA10P43363 369 aaPredicted RBP5.64□□□□□ -1.51
RPL39-201ENST00000361575 GATMP50440 423 aa5.64□□□□□ -1.51
RPL39-201ENST00000361575 PDE6CP51160 858 aa5.64□□□□□ -1.51
RPL39-201ENST00000361575 HNRNPMP52272 730 aaKnown RBP eCLIP5.64□□□□□ -1.51
RPL39-201ENST00000361575 RPS7P62081 194 aaKnown RBP5.64□□□□□ -1.51
RPL39-201ENST00000361575 SATB1Q01826 763 aa5.64□□□□□ -1.51
RPL39-201ENST00000361575 MTAPQ13126 283 aa5.64□□□□□ -1.51
RPL39-201ENST00000361575 TUBB3Q13509 450 aa5.64□□□□□ -1.51
RPL39-201ENST00000361575 RRP1BQ14684 758 aaKnown RBP5.64□□□□□ -1.51
RPL39-201ENST00000361575 SMAD1Q15797 465 aaKnown RBP5.64□□□□□ -1.51
RPL39-201ENST00000361575 GPATCH4Q5T3I0 446 aaKnown RBP5.64□□□□□ -1.51
RPL39-201ENST00000361575 DEPDC1Q5TB30 811 aa5.64□□□□□ -1.51
RPL39-201ENST00000361575 ATPAF1Q5TC12 328 aaPredicted RBP5.64□□□□□ -1.51
RPL39-201ENST00000361575 ANKRD45Q5TZF3 282 aa5.64□□□□□ -1.51
RPL39-201ENST00000361575 ICE2Q659A1 982 aa5.64□□□□□ -1.51
RPL39-201ENST00000361575 PIK3AP1Q6ZUJ8 805 aa5.64□□□□□ -1.51
RPL39-201ENST00000361575 BBS12Q6ZW61 710 aa5.64□□□□□ -1.51
RPL39-201ENST00000361575 CIR1Q86X95 450 aaPredicted RBP5.64□□□□□ -1.51
RPL39-201ENST00000361575 TICAM2Q86XR7 235 aa5.64□□□□□ -1.51
RPL39-201ENST00000361575 SIAH1Q8IUQ4 282 aa5.64□□□□□ -1.51
RPL39-201ENST00000361575 LRRC56Q8IYG6 542 aaPredicted RBP5.64□□□□□ -1.51
RPL39-201ENST00000361575 ABHD5Q8WTS1 349 aa5.64□□□□□ -1.51
RPL39-201ENST00000361575 SNX19Q92543 992 aa5.64□□□□□ -1.51
RPL39-201ENST00000361575 NUDT22Q9BRQ3 303 aa5.64□□□□□ -1.51
RPL39-201ENST00000361575 C17orf80Q9BSJ5 609 aa5.64□□□□□ -1.51
RPL39-201ENST00000361575 SLC26A6Q9BXS9 759 aa5.64□□□□□ -1.51
RPL39-201ENST00000361575 AGXT2Q9BYV1 514 aa5.64□□□□□ -1.51
RPL39-201ENST00000361575 OSBPL5Q9H0X9 879 aaPredicted RBP5.64□□□□□ -1.51
RPL39-201ENST00000361575 ABHD16BQ9H3Z7 469 aa5.64□□□□□ -1.51
RPL39-201ENST00000361575 ELAC1Q9H777 363 aaKnown RBP5.64□□□□□ -1.51
RPL39-201ENST00000361575 ALG13Q9NP73 1137 aaKnown RBP5.64□□□□□ -1.51
RPL39-201ENST00000361575 RASSF1Q9NS23 344 aa5.64□□□□□ -1.51
RPL39-201ENST00000361575 RNF181Q9P0P0 153 aa5.64□□□□□ -1.51
RPL39-201ENST00000361575 KCND3Q9UK17 655 aa5.64□□□□□ -1.51
RPL39-201ENST00000361575 SLC13A4Q9UKG4 626 aa5.64□□□□□ -1.51
RPL39-201ENST00000361575 C19orf53Q9UNZ5 99 aaPredicted RBP5.64□□□□□ -1.51
RPL39-201ENST00000361575 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.64□□□□□ -1.51
RPL39-201ENST00000361575 FPGT-TNNI3KV9GXZ4 949 aa5.64□□□□□ -1.51
RPL39-201ENST00000361575 KRTAP23-1A1A580 65 aa5.63□□□□□ -1.51
RPL39-201ENST00000361575 MYADML2A6NDP7 307 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms