RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 LCA5Q86VQ0 697 aa13.95□□□□□ -0.18
LDB3-202ENST00000361373 FAM131BQ86XD5 332 aa13.95□□□□□ -0.18
LDB3-202ENST00000361373 PRPF18Q99633 342 aaKnown RBP13.95□□□□□ -0.18
LDB3-202ENST00000361373 COG4Q9H9E3 785 aa13.95□□□□□ -0.18
LDB3-202ENST00000361373 NMRK1Q9NWW6 199 aa13.95□□□□□ -0.18
LDB3-202ENST00000361373 USP15Q9Y4E8 981 aaPredicted RBP13.95□□□□□ -0.18
LDB3-202ENST00000361373 MAGEB16A2A368 324 aa13.95□□□□□ -0.18
LDB3-202ENST00000361373 H2AFYO75367 372 aaKnown RBP13.95□□□□□ -0.18
LDB3-202ENST00000361373 RARGP13631 454 aa13.95□□□□□ -0.18
LDB3-202ENST00000361373 SP3Q02447 781 aa13.95□□□□□ -0.18
LDB3-202ENST00000361373 INPP5AQ14642 412 aa13.95□□□□□ -0.18
LDB3-202ENST00000361373 SMAD1Q15797 465 aaKnown RBP13.95□□□□□ -0.18
LDB3-202ENST00000361373 SYCP2LQ5T4T6 812 aa13.95□□□□□ -0.18
LDB3-202ENST00000361373 ADCK2Q7Z695 626 aa13.95□□□□□ -0.18
LDB3-202ENST00000361373 SH3RF1Q7Z6J0 888 aa13.95□□□□□ -0.18
LDB3-202ENST00000361373 C4orf33Q8N1A6 199 aa13.95□□□□□ -0.18
LDB3-202ENST00000361373 DDI1Q8WTU0 396 aa13.95□□□□□ -0.18
LDB3-202ENST00000361373 RNF208Q9H0X6 261 aa13.95□□□□□ -0.18
LDB3-202ENST00000361373 CYP4F11Q9HBI6 524 aa13.95□□□□□ -0.18
LDB3-202ENST00000361373 TBC1D13Q9NVG8 400 aa13.95□□□□□ -0.18
LDB3-202ENST00000361373 TSR3Q9UJK0 312 aaKnown RBP13.95□□□□□ -0.18
LDB3-202ENST00000361373 MRC1P22897 1456 aa13.95□□□□□ -0.18
LDB3-202ENST00000361373 LACTBL1A8MY62 500 aa13.95□□□□□ -0.18
LDB3-202ENST00000361373 VPS26AO75436 327 aa13.95□□□□□ -0.18
LDB3-202ENST00000361373 ITGALP20701 1170 aa13.95□□□□□ -0.18
LDB3-202ENST00000361373 EIF2B5Q13144 721 aaKnown RBP13.95□□□□□ -0.18
LDB3-202ENST00000361373 SPDYAQ5MJ70 313 aa13.95□□□□□ -0.18
LDB3-202ENST00000361373 ARMC6Q6NXE6 501 aa13.95□□□□□ -0.18
LDB3-202ENST00000361373 CMTM5Q96DZ9 223 aa13.95□□□□□ -0.18
LDB3-202ENST00000361373 FAR2Q96K12 515 aa13.95□□□□□ -0.18
LDB3-202ENST00000361373 FTHL17Q9BXU8 183 aa13.95□□□□□ -0.18
LDB3-202ENST00000361373 TSPYL2Q9H2G4 693 aaPredicted RBP13.95□□□□□ -0.18
LDB3-202ENST00000361373 PDGFCQ9NRA1 345 aa13.95□□□□□ -0.18
LDB3-202ENST00000361373 CHCHD3Q9NX63 227 aaKnown RBP13.95□□□□□ -0.18
LDB3-202ENST00000361373 VPS28Q9UK41 221 aa13.95□□□□□ -0.18
LDB3-202ENST00000361373 CES2O00748 559 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 POMCP01189 267 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 GTF2BQ00403 316 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 ORC1Q13415 861 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 E2F4Q16254 413 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 ERMARDQ5T6L9 678 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 FOXR2Q6PJQ5 311 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 DEFB128Q7Z7B8 93 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 KCNK16Q96T55 309 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 RUBCNLQ9H714 662 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 L2HGDHQ9H9P8 463 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 SLC39A10Q9ULF5 831 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 UBR1Q8IWV7 1749 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 XYLBO75191 536 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 GLRA3O75311 464 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 SOX10P56693 466 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 CUL3Q13618 768 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 DEFB115Q30KQ5 88 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 WDR93Q6P2C0 686 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 CCDC60Q8IWA6 550 aaPredicted RBP13.94□□□□□ -0.18
LDB3-202ENST00000361373 FAM9CQ8IZT9 166 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 DPF3Q92784 378 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 TATDN2Q93075 761 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 PRMT1Q99873 361 aaKnown RBP13.94□□□□□ -0.18
LDB3-202ENST00000361373 MAFO75444 373 aaPredicted RBP13.94□□□□□ -0.18
LDB3-202ENST00000361373 DNAJB2P25686 324 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 RAP1GAPP47736 663 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 GUCY1A3Q02108 690 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 IKBKEQ14164 716 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 NAA30Q147X3 362 aaPredicted RBP13.94□□□□□ -0.18
LDB3-202ENST00000361373 ZNF284Q2VY69 593 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 OOSP2Q86WS3 158 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 DCLK3Q9C098 648 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 STX18Q9P2W9 335 aaKnown RBP13.94□□□□□ -0.18
LDB3-202ENST00000361373 CCDC78A2IDD5 438 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 TRPC5OSA6NMA1 111 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 SPATA31C2B4DYI2 1134 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 YWHAQP27348 245 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 GCKP35557 465 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 NR2C2P49116 596 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 SLC29A2Q14542 456 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 GRIK5Q16478 980 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 ZBTB41Q5SVQ8 909 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 NLRP9Q7RTR0 991 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 SLC9A9Q8IVB4 645 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 E2F7Q96AV8 911 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 KLRG1Q96E93 195 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 FAM118BQ9BPY3 351 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 MRPL46Q9H2W6 279 aaKnown RBP13.94□□□□□ -0.18
LDB3-202ENST00000361373 ECT2Q9H8V3 914 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 DCDC2Q9UHG0 476 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 CDYLQ9Y232 598 aa13.94□□□□□ -0.18
LDB3-202ENST00000361373 TMEM120BA0PK00 339 aa13.93□□□□□ -0.18
LDB3-202ENST00000361373 FAM171A1Q5VUB5 890 aa13.93□□□□□ -0.18
LDB3-202ENST00000361373 NOA1Q8NC60 698 aaKnown RBP13.93□□□□□ -0.18
LDB3-202ENST00000361373 PIP4K2CQ8TBX8 421 aa13.93□□□□□ -0.18
LDB3-202ENST00000361373 BLOC1S5Q8TDH9 187 aa13.93□□□□□ -0.18
LDB3-202ENST00000361373 IL17RAQ96F46 866 aa13.93□□□□□ -0.18
LDB3-202ENST00000361373 DUSP9Q99956 384 aaKnown RBP13.93□□□□□ -0.18
LDB3-202ENST00000361373 SCUBE2Q9NQ36 999 aa13.93□□□□□ -0.18
LDB3-202ENST00000361373 THG1LQ9NWX6 298 aaKnown RBP13.93□□□□□ -0.18
LDB3-202ENST00000361373 CHORDC1Q9UHD1 332 aaPredicted RBP13.93□□□□□ -0.18
LDB3-202ENST00000361373 SNX5Q9Y5X3 404 aa13.93□□□□□ -0.18
LDB3-202ENST00000361373 VCLP18206 1134 aa13.93□□□□□ -0.18
LDB3-202ENST00000361373 RHOAP61586 193 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms