RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 A8MXQ7 604 aa23.62■■□□□ 1.37
LDB1-201ENST00000361198 APOC4-APOC2K7ER74 178 aa23.62■■□□□ 1.37
LDB1-201ENST00000361198 PIRO00625 290 aa23.62■■□□□ 1.37
LDB1-201ENST00000361198 APOC2P02655 101 aa23.62■■□□□ 1.37
LDB1-201ENST00000361198 ATP11AP98196 1134 aa23.62■■□□□ 1.37
LDB1-201ENST00000361198 FBXO47Q5MNV8 452 aa23.62■■□□□ 1.37
LDB1-201ENST00000361198 TMEM110Q86TL2 294 aa23.62■■□□□ 1.37
LDB1-201ENST00000361198 UNC93AQ86WB7 457 aa23.62■■□□□ 1.37
LDB1-201ENST00000361198 KHSRPQ92945 711 aaKnown RBP eCLIP23.62■■□□□ 1.37
LDB1-201ENST00000361198 FRMD8P1Q9BZ68 369 aaPredicted RBP23.62■■□□□ 1.37
LDB1-201ENST00000361198 AP5M1Q9H0R1 490 aa23.62■■□□□ 1.37
LDB1-201ENST00000361198 KCNK9Q9NPC2 374 aa23.62■■□□□ 1.37
LDB1-201ENST00000361198 HESX1Q9UBX0 185 aa23.62■■□□□ 1.37
LDB1-201ENST00000361198 FOXO6A8MYZ6 492 aa23.62■■□□□ 1.37
LDB1-201ENST00000361198 SPTLC1O15269 473 aa23.62■■□□□ 1.37
LDB1-201ENST00000361198 ENDOD1O94919 500 aa23.62■■□□□ 1.37
LDB1-201ENST00000361198 CDH6P55285 790 aa23.62■■□□□ 1.37
LDB1-201ENST00000361198 FASTKD3Q14CZ7 662 aaKnown RBP23.62■■□□□ 1.37
LDB1-201ENST00000361198 GALNTL6Q49A17 601 aa23.62■■□□□ 1.37
LDB1-201ENST00000361198 C17orf99Q6UX52 265 aa23.62■■□□□ 1.37
LDB1-201ENST00000361198 SESTD1Q86VW0 696 aa23.62■■□□□ 1.37
LDB1-201ENST00000361198 C7orf31Q8N865 590 aa23.62■■□□□ 1.37
LDB1-201ENST00000361198 KBTBD7Q8WVZ9 684 aa23.62■■□□□ 1.37
LDB1-201ENST00000361198 CCDC77Q9BR77 488 aa23.62■■□□□ 1.37
LDB1-201ENST00000361198 B3GNT5Q9BYG0 378 aa23.62■■□□□ 1.37
LDB1-201ENST00000361198 RSAD1Q9HA92 442 aa23.62■■□□□ 1.37
LDB1-201ENST00000361198 GOLGA2P5Q9HBQ8 144 aa23.62■■□□□ 1.37
LDB1-201ENST00000361198 CFAP73A6NFT4 308 aa23.61■■□□□ 1.37
LDB1-201ENST00000361198 PAPSS1O43252 624 aaPredicted RBP23.61■■□□□ 1.37
LDB1-201ENST00000361198 SUN1O94901 812 aa23.61■■□□□ 1.37
LDB1-201ENST00000361198 PDGFRBP09619 1106 aa23.61■■□□□ 1.37
LDB1-201ENST00000361198 FGFR1P11362 822 aa23.61■■□□□ 1.37
LDB1-201ENST00000361198 SF3A3Q12874 501 aaKnown RBP eCLIP23.61■■□□□ 1.37
LDB1-201ENST00000361198 HP1BP3Q5SSJ5 553 aaPredicted RBP23.61■■□□□ 1.37
LDB1-201ENST00000361198 WLSQ5T9L3 541 aa23.61■■□□□ 1.37
LDB1-201ENST00000361198 NUGGCQ68CJ6 796 aa23.61■■□□□ 1.37
LDB1-201ENST00000361198 RIBC1Q8N443 379 aaPredicted RBP23.61■■□□□ 1.37
LDB1-201ENST00000361198 C17orf102A2RUQ5 167 aa23.61■■□□□ 1.37
LDB1-201ENST00000361198 PRPSAP2O60256 369 aa23.61■■□□□ 1.37
LDB1-201ENST00000361198 LMO2P25791 158 aa23.61■■□□□ 1.37
LDB1-201ENST00000361198 SLC6A3Q01959 620 aa23.61■■□□□ 1.37
LDB1-201ENST00000361198 SOX4Q06945 474 aaPredicted RBP23.61■■□□□ 1.37
LDB1-201ENST00000361198 PREPLQ4J6C6 727 aaPredicted RBP23.61■■□□□ 1.37
LDB1-201ENST00000361198 ZNF618Q5T7W0 954 aa23.61■■□□□ 1.37
LDB1-201ENST00000361198 UNC45BQ8IWX7 931 aa23.61■■□□□ 1.37
LDB1-201ENST00000361198 CCDC63Q8NA47 563 aa23.61■■□□□ 1.37
LDB1-201ENST00000361198 PRCCQ92733 491 aaPredicted RBP23.61■■□□□ 1.37
LDB1-201ENST00000361198 MANSC4A6NHS7 340 aaPredicted RBP23.6■■□□□ 1.37
LDB1-201ENST00000361198 KPNA7A9QM74 516 aa23.6■■□□□ 1.37
LDB1-201ENST00000361198 CD4P01730 458 aa23.6■■□□□ 1.37
LDB1-201ENST00000361198 SETSIPP0DME0 302 aa23.6■■□□□ 1.37
LDB1-201ENST00000361198 RDXP35241 583 aaKnown RBP23.6■■□□□ 1.37
LDB1-201ENST00000361198 ARHGAP17Q68EM7 881 aa23.6■■□□□ 1.37
LDB1-201ENST00000361198 ARHGEF18Q6ZSZ5 1173 aa23.6■■□□□ 1.37
LDB1-201ENST00000361198 GBP7Q8N8V2 638 aaPredicted RBP23.6■■□□□ 1.37
LDB1-201ENST00000361198 ANKRD42Q8N9B4 389 aa23.6■■□□□ 1.37
LDB1-201ENST00000361198 RSAD2Q8WXG1 361 aa23.6■■□□□ 1.37
LDB1-201ENST00000361198 PLCD4Q9BRC7 762 aa23.6■■□□□ 1.37
LDB1-201ENST00000361198 TBK1Q9UHD2 729 aa23.6■■□□□ 1.37
LDB1-201ENST00000361198 SHOC2Q9UQ13 582 aa23.6■■□□□ 1.37
LDB1-201ENST00000361198 FARP1Q9Y4F1 1045 aaPredicted RBP23.6■■□□□ 1.37
LDB1-201ENST00000361198 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.6■■□□□ 1.37
LDB1-201ENST00000361198 CCDC130P13994 396 aa23.59■■□□□ 1.37
LDB1-201ENST00000361198 CTCFP49711 727 aaPredicted RBP23.59■■□□□ 1.37
LDB1-201ENST00000361198 CRYBB1P53674 252 aaPredicted RBP23.59■■□□□ 1.37
LDB1-201ENST00000361198 EIF3EP60228 445 aaKnown RBP23.59■■□□□ 1.37
LDB1-201ENST00000361198 DPYSL3Q14195 570 aa23.59■■□□□ 1.37
LDB1-201ENST00000361198 CCDC142Q17RM4 750 aa23.59■■□□□ 1.37
LDB1-201ENST00000361198 XKR4Q5GH76 650 aa23.59■■□□□ 1.37
LDB1-201ENST00000361198 NPNTQ6UXI9 565 aa23.59■■□□□ 1.37
LDB1-201ENST00000361198 ARRDC4Q8NCT1 418 aa23.59■■□□□ 1.37
LDB1-201ENST00000361198 SPATA18Q8TC71 538 aa23.59■■□□□ 1.37
LDB1-201ENST00000361198 MAML1Q92585 1016 aa23.59■■□□□ 1.37
LDB1-201ENST00000361198 MAGEB18Q96M61 343 aa23.59■■□□□ 1.37
LDB1-201ENST00000361198 NGRNQ9NPE2 291 aaKnown RBP23.59■■□□□ 1.37
LDB1-201ENST00000361198 PRKAG3Q9UGI9 489 aa23.59■■□□□ 1.37
LDB1-201ENST00000361198 IPPQ9Y573 584 aa23.59■■□□□ 1.37
LDB1-201ENST00000361198 UBOX5O94941 541 aa23.59■■□□□ 1.37
LDB1-201ENST00000361198 RGS2P41220 211 aa23.59■■□□□ 1.37
LDB1-201ENST00000361198 FSCN1Q16658 493 aaKnown RBP23.59■■□□□ 1.37
LDB1-201ENST00000361198 SCYL2Q6P3W7 929 aa23.59■■□□□ 1.37
LDB1-201ENST00000361198 FAM172AQ8WUF8 416 aa23.59■■□□□ 1.37
LDB1-201ENST00000361198 MAK16Q9BXY0 300 aaKnown RBP23.59■■□□□ 1.37
LDB1-201ENST00000361198 ARL2BPQ9Y2Y0 163 aa23.59■■□□□ 1.37
LDB1-201ENST00000361198 Q9Y3F1 56 aa23.59■■□□□ 1.37
LDB1-201ENST00000361198 GOLGA8MH3BSY2 632 aa23.58■■□□□ 1.37
LDB1-201ENST00000361198 DPYSL4O14531 572 aa23.58■■□□□ 1.37
LDB1-201ENST00000361198 RBP3P10745 1247 aa23.58■■□□□ 1.37
LDB1-201ENST00000361198 KCNE1P15382 129 aa23.58■■□□□ 1.37
LDB1-201ENST00000361198 RPL22P35268 128 aaKnown RBP23.58■■□□□ 1.37
LDB1-201ENST00000361198 GNL1P36915 607 aaPredicted RBP23.58■■□□□ 1.37
LDB1-201ENST00000361198 PURAQ00577 322 aaKnown RBP23.58■■□□□ 1.37
LDB1-201ENST00000361198 GAD2Q05329 585 aa23.58■■□□□ 1.37
LDB1-201ENST00000361198 RIPK1Q13546 671 aa23.58■■□□□ 1.37
LDB1-201ENST00000361198 FAM133BQ5BKY9 247 aaKnown RBP23.58■■□□□ 1.37
LDB1-201ENST00000361198 SMG8Q8ND04 991 aaKnown RBP23.58■■□□□ 1.37
LDB1-201ENST00000361198 STK32AQ8WU08 396 aa23.58■■□□□ 1.37
LDB1-201ENST00000361198 CPT1BQ92523 772 aa23.58■■□□□ 1.37
LDB1-201ENST00000361198 KATNAL1Q9BW62 490 aa23.58■■□□□ 1.37
LDB1-201ENST00000361198 IGHA2P01877 340 aa23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms