RNA–Protein interactions for RNA: ENST00000361162.10

RBM39-203, Transcript of RNA binding motif protein 39, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBM39, Length 2,831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-203ENST00000361162 CHURC1Q8WUH1 139 aa12.74□□□□□ -0.37
RBM39-203ENST00000361162 PRPF31Q8WWY3 499 aaKnown RBP12.74□□□□□ -0.37
RBM39-203ENST00000361162 NACC1Q96RE7 527 aa12.74□□□□□ -0.37
RBM39-203ENST00000361162 USP29Q9HBJ7 922 aa12.74□□□□□ -0.37
RBM39-203ENST00000361162 SEL1LQ9UBV2 794 aa12.74□□□□□ -0.37
RBM39-203ENST00000361162 ZNF711Q9Y462 761 aa12.74□□□□□ -0.37
RBM39-203ENST00000361162 ZNF236Q9UL36 1845 aa12.74□□□□□ -0.37
RBM39-203ENST00000361162 F8VP50 259 aa12.74□□□□□ -0.37
RBM39-203ENST00000361162 AVILO75366 819 aa12.74□□□□□ -0.37
RBM39-203ENST00000361162 EGFRP00533 1210 aa12.74□□□□□ -0.37
RBM39-203ENST00000361162 ARP10275 920 aa12.74□□□□□ -0.37
RBM39-203ENST00000361162 CDK4P11802 303 aa12.74□□□□□ -0.37
RBM39-203ENST00000361162 CHN2P52757 468 aa12.74□□□□□ -0.37
RBM39-203ENST00000361162 MAMLD1Q13495 774 aa12.74□□□□□ -0.37
RBM39-203ENST00000361162 HIC1Q14526 733 aa12.74□□□□□ -0.37
RBM39-203ENST00000361162 CHI3L2Q15782 390 aa12.74□□□□□ -0.37
RBM39-203ENST00000361162 SNRNP35Q16560 246 aaKnown RBP12.74□□□□□ -0.37
RBM39-203ENST00000361162 CCDC142Q17RM4 750 aa12.74□□□□□ -0.37
RBM39-203ENST00000361162 SPOPLQ6IQ16 392 aa12.74□□□□□ -0.37
RBM39-203ENST00000361162 MAP7D3Q8IWC1 876 aa12.74□□□□□ -0.37
RBM39-203ENST00000361162 TRIM42Q8IWZ5 723 aa12.74□□□□□ -0.37
RBM39-203ENST00000361162 CTAGE3PQ8IX95 158 aa12.74□□□□□ -0.37
RBM39-203ENST00000361162 ATP11CQ8NB49 1132 aa12.74□□□□□ -0.37
RBM39-203ENST00000361162 ZFP28Q8NHY6 868 aa12.74□□□□□ -0.37
RBM39-203ENST00000361162 PIP4K2CQ8TBX8 421 aa12.74□□□□□ -0.37
RBM39-203ENST00000361162 HSPBAP1Q96EW2 488 aa12.74□□□□□ -0.37
RBM39-203ENST00000361162 IQCGQ9H095 443 aaKnown RBP12.74□□□□□ -0.37
RBM39-203ENST00000361162 UNC45AQ9H3U1 944 aa12.74□□□□□ -0.37
RBM39-203ENST00000361162 RAB20Q9NX57 234 aa12.74□□□□□ -0.37
RBM39-203ENST00000361162 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.74□□□□□ -0.37
RBM39-203ENST00000361162 IKBKGQ9Y6K9 419 aa12.74□□□□□ -0.37
RBM39-203ENST00000361162 PSMD10O75832 226 aa12.73□□□□□ -0.37
RBM39-203ENST00000361162 NDUFB10O96000 172 aa12.73□□□□□ -0.37
RBM39-203ENST00000361162 PEX3P56589 373 aa12.73□□□□□ -0.37
RBM39-203ENST00000361162 COG7P83436 770 aa12.73□□□□□ -0.37
RBM39-203ENST00000361162 HNRNPDQ14103 355 aaKnown RBP12.73□□□□□ -0.37
RBM39-203ENST00000361162 TLR1Q15399 786 aa12.73□□□□□ -0.37
RBM39-203ENST00000361162 TMCO4Q5TGY1 634 aa12.73□□□□□ -0.37
RBM39-203ENST00000361162 KRT39Q6A163 491 aa12.73□□□□□ -0.37
RBM39-203ENST00000361162 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.73□□□□□ -0.37
RBM39-203ENST00000361162 CPT1BQ92523 772 aa12.73□□□□□ -0.37
RBM39-203ENST00000361162 SRPK1Q96SB4 655 aaKnown RBP12.73□□□□□ -0.37
RBM39-203ENST00000361162 FOXP3Q9BZS1 431 aa12.73□□□□□ -0.37
RBM39-203ENST00000361162 ACSS3Q9H6R3 686 aa12.73□□□□□ -0.37
RBM39-203ENST00000361162 ARHGEF38Q9NXL2 777 aa12.73□□□□□ -0.37
RBM39-203ENST00000361162 STRIP2Q9ULQ0 834 aa12.73□□□□□ -0.37
RBM39-203ENST00000361162 AK5Q9Y6K8 562 aa12.73□□□□□ -0.37
RBM39-203ENST00000361162 DDNO94850 711 aaPredicted RBP12.73□□□□□ -0.37
RBM39-203ENST00000361162 TGDSO95455 350 aa12.73□□□□□ -0.37
RBM39-203ENST00000361162 CLPTM1O96005 669 aa12.73□□□□□ -0.37
RBM39-203ENST00000361162 PROCP04070 461 aa12.73□□□□□ -0.37
RBM39-203ENST00000361162 SMIM18P0DKX4 95 aa12.73□□□□□ -0.37
RBM39-203ENST00000361162 RAG1P15918 1043 aa12.73□□□□□ -0.37
RBM39-203ENST00000361162 PHBP35232 272 aa12.73□□□□□ -0.37
RBM39-203ENST00000361162 CCNIQ14094 377 aa12.73□□□□□ -0.37
RBM39-203ENST00000361162 EFHC1Q5JVL4 640 aa12.73□□□□□ -0.37
RBM39-203ENST00000361162 UGT2A3Q6UWM9 527 aa12.73□□□□□ -0.37
RBM39-203ENST00000361162 SV2AQ7L0J3 742 aa12.73□□□□□ -0.37
RBM39-203ENST00000361162 HAUS6Q7Z4H7 955 aa12.73□□□□□ -0.37
RBM39-203ENST00000361162 HPS6Q86YV9 775 aa12.73□□□□□ -0.37
RBM39-203ENST00000361162 KATNAL2Q8IYT4 538 aa12.73□□□□□ -0.37
RBM39-203ENST00000361162 EXD1Q8NHP7 514 aa12.73□□□□□ -0.37
RBM39-203ENST00000361162 APOL6Q9BWW8 343 aa12.73□□□□□ -0.37
RBM39-203ENST00000361162 STRA6Q9BX79 667 aa12.73□□□□□ -0.37
RBM39-203ENST00000361162 LIN28AQ9H9Z2 209 aaKnown RBP12.73□□□□□ -0.37
RBM39-203ENST00000361162 TUFT1Q9NNX1 390 aa12.73□□□□□ -0.37
RBM39-203ENST00000361162 UBAP1Q9NZ09 502 aa12.73□□□□□ -0.37
RBM39-203ENST00000361162 TMEM63AO94886 807 aa12.72□□□□□ -0.37
RBM39-203ENST00000361162 DHRS4L1P0CG22 281 aa12.72□□□□□ -0.37
RBM39-203ENST00000361162 PMLP29590 882 aa12.72□□□□□ -0.37
RBM39-203ENST00000361162 YWHAGP61981 247 aaKnown RBP eCLIP12.72□□□□□ -0.37
RBM39-203ENST00000361162 BMPR2Q13873 1038 aa12.72□□□□□ -0.37
RBM39-203ENST00000361162 B3GNT6Q6ZMB0 384 aa12.72□□□□□ -0.37
RBM39-203ENST00000361162 SULF1Q8IWU6 871 aa12.72□□□□□ -0.37
RBM39-203ENST00000361162 FBXL13Q8NEE6 735 aa12.72□□□□□ -0.37
RBM39-203ENST00000361162 SLITRK1Q96PX8 696 aa12.72□□□□□ -0.37
RBM39-203ENST00000361162 ACCSQ96QU6 501 aa12.72□□□□□ -0.37
RBM39-203ENST00000361162 LZTS1Q9Y250 596 aa12.72□□□□□ -0.37
RBM39-203ENST00000361162 TRIM49D1C9J1S8 452 aa12.72□□□□□ -0.37
RBM39-203ENST00000361162 I3L4J1 428 aa12.72□□□□□ -0.37
RBM39-203ENST00000361162 COPEO14579 308 aa12.72□□□□□ -0.37
RBM39-203ENST00000361162 P4HA2O15460 535 aa12.72□□□□□ -0.37
RBM39-203ENST00000361162 MSX2P35548 267 aaPredicted RBP12.72□□□□□ -0.37
RBM39-203ENST00000361162 CPOXP36551 454 aa12.72□□□□□ -0.37
RBM39-203ENST00000361162 PSMC5P62195 406 aa12.72□□□□□ -0.37
RBM39-203ENST00000361162 BASP1P80723 227 aaKnown RBP12.72□□□□□ -0.37
RBM39-203ENST00000361162 PLOD1Q02809 727 aaPredicted RBP12.72□□□□□ -0.37
RBM39-203ENST00000361162 SMTNL2Q2TAL5 461 aa12.72□□□□□ -0.37
RBM39-203ENST00000361162 MYLK3Q32MK0 819 aa12.72□□□□□ -0.37
RBM39-203ENST00000361162 C1orf228Q6PIY5 440 aa12.72□□□□□ -0.37
RBM39-203ENST00000361162 LBX2Q6XYB7 198 aa12.72□□□□□ -0.37
RBM39-203ENST00000361162 RSPH3Q86UC2 560 aa12.72□□□□□ -0.37
RBM39-203ENST00000361162 PRICKLE1Q96MT3 831 aaPredicted RBP12.72□□□□□ -0.37
RBM39-203ENST00000361162 CCDC106Q9BWC9 280 aa12.72□□□□□ -0.37
RBM39-203ENST00000361162 INPP5FQ9Y2H2 1132 aa12.72□□□□□ -0.37
RBM39-203ENST00000361162 SLC45A1Q9Y2W3 748 aa12.72□□□□□ -0.37
RBM39-203ENST00000361162 A0A1B0GTW7 788 aa12.71□□□□□ -0.37
RBM39-203ENST00000361162 SMIM31A0A1B0GVY4 71 aa12.71□□□□□ -0.37
RBM39-203ENST00000361162 BOLA2-SMG1P6H3BVE0 249 aa12.71□□□□□ -0.37
RBM39-203ENST00000361162 TRPA1O75762 1119 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms