RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 ZNF217O75362 1048 aa14.76□□□□□ -0.05
VPS29-201ENST00000360579 SEC24BO95487 1268 aa14.76□□□□□ -0.05
VPS29-201ENST00000360579 ABL1P00519 1130 aa14.76□□□□□ -0.05
VPS29-201ENST00000360579 WARSP23381 471 aaKnown RBP14.76□□□□□ -0.05
VPS29-201ENST00000360579 GAD2Q05329 585 aa14.76□□□□□ -0.05
VPS29-201ENST00000360579 KDSRQ06136 332 aa14.76□□□□□ -0.05
VPS29-201ENST00000360579 ZNF33AQ06730 810 aa14.76□□□□□ -0.05
VPS29-201ENST00000360579 EMC10Q5UCC4 262 aa14.76□□□□□ -0.05
VPS29-201ENST00000360579 TDRD10Q5VZ19 366 aaKnown RBP14.76□□□□□ -0.05
VPS29-201ENST00000360579 DYMQ7RTS9 669 aa14.76□□□□□ -0.05
VPS29-201ENST00000360579 RAB44Q7Z6P3 723 aaPredicted RBP14.76□□□□□ -0.05
VPS29-201ENST00000360579 C12orf40Q86WS4 652 aa14.76□□□□□ -0.05
VPS29-201ENST00000360579 CHCHD4Q8N4Q1 142 aa14.76□□□□□ -0.05
VPS29-201ENST00000360579 MINDY1Q8N5J2 469 aa14.76□□□□□ -0.05
VPS29-201ENST00000360579 ZNF513Q8N8E2 541 aaPredicted RBP14.76□□□□□ -0.05
VPS29-201ENST00000360579 KBTBD7Q8WVZ9 684 aa14.76□□□□□ -0.05
VPS29-201ENST00000360579 HPDLQ96IR7 371 aa14.76□□□□□ -0.05
VPS29-201ENST00000360579 CRTAC1Q9NQ79 661 aa14.76□□□□□ -0.05
VPS29-201ENST00000360579 DNAAF2Q9NVR5 837 aaKnown RBP14.76□□□□□ -0.05
VPS29-201ENST00000360579 STK17AQ9UEE5 414 aa14.76□□□□□ -0.05
VPS29-201ENST00000360579 PCNX2A6NKB5 2137 aa14.75□□□□□ -0.05
VPS29-201ENST00000360579 HELZP42694 1942 aaKnown RBP14.75□□□□□ -0.05
VPS29-201ENST00000360579 A0A1W2PQD8 194 aa14.75□□□□□ -0.05
VPS29-201ENST00000360579 GCNT3O95395 438 aa14.75□□□□□ -0.05
VPS29-201ENST00000360579 TNNC2P02585 160 aa14.75□□□□□ -0.05
VPS29-201ENST00000360579 MBL2P11226 248 aaPredicted RBP14.75□□□□□ -0.05
VPS29-201ENST00000360579 LMO2P25791 158 aa14.75□□□□□ -0.05
VPS29-201ENST00000360579 KCNA1Q09470 495 aa14.75□□□□□ -0.05
VPS29-201ENST00000360579 MESP2Q0VG99 397 aa14.75□□□□□ -0.05
VPS29-201ENST00000360579 TAF10Q12962 218 aa14.75□□□□□ -0.05
VPS29-201ENST00000360579 SURF1Q15526 300 aa14.75□□□□□ -0.05
VPS29-201ENST00000360579 LY6G5CQ5SRR4 150 aa14.75□□□□□ -0.05
VPS29-201ENST00000360579 SFTPA1Q8IWL2 248 aa14.75□□□□□ -0.05
VPS29-201ENST00000360579 PDZD8Q8NEN9 1154 aa14.75□□□□□ -0.05
VPS29-201ENST00000360579 PCED1BQ96HM7 432 aa14.75□□□□□ -0.05
VPS29-201ENST00000360579 FAM124BQ9H5Z6 455 aaPredicted RBP14.75□□□□□ -0.05
VPS29-201ENST00000360579 PDE11AQ9HCR9 933 aa14.75□□□□□ -0.05
VPS29-201ENST00000360579 OLFML3Q9NRN5 406 aa14.75□□□□□ -0.05
VPS29-201ENST00000360579 INTS13Q9NVM9 706 aa14.75□□□□□ -0.05
VPS29-201ENST00000360579 DEC1Q9P2X7 70 aa14.75□□□□□ -0.05
VPS29-201ENST00000360579 CCDC39Q9UFE4 941 aa14.75□□□□□ -0.05
VPS29-201ENST00000360579 ANAPC1Q9H1A4 1944 aa14.74□□□□□ -0.05
VPS29-201ENST00000360579 GOLGA8IPA6NC78 632 aa14.74□□□□□ -0.05
VPS29-201ENST00000360579 GOLGA8JA6NMD2 632 aa14.74□□□□□ -0.05
VPS29-201ENST00000360579 F8VP50 259 aa14.74□□□□□ -0.05
VPS29-201ENST00000360579 HOXC11O43248 304 aaPredicted RBP14.74□□□□□ -0.05
VPS29-201ENST00000360579 PDGFRBP09619 1106 aa14.74□□□□□ -0.05
VPS29-201ENST00000360579 FAM163BP0C2L3 166 aa14.74□□□□□ -0.05
VPS29-201ENST00000360579 CD59P13987 128 aa14.74□□□□□ -0.05
VPS29-201ENST00000360579 HOXB2P14652 356 aa14.74□□□□□ -0.05
VPS29-201ENST00000360579 TRIP6Q15654 476 aaKnown RBP14.74□□□□□ -0.05
VPS29-201ENST00000360579 DUOXA2Q1HG44 320 aa14.74□□□□□ -0.05
VPS29-201ENST00000360579 GPD1LQ8N335 351 aa14.74□□□□□ -0.05
VPS29-201ENST00000360579 PHTF2Q8N3S3 785 aa14.74□□□□□ -0.05
VPS29-201ENST00000360579 ZSWIM2Q8NEG5 633 aa14.74□□□□□ -0.05
VPS29-201ENST00000360579 NOC3LQ8WTT2 800 aaKnown RBP14.74□□□□□ -0.05
VPS29-201ENST00000360579 OVCA2Q8WZ82 227 aa14.74□□□□□ -0.05
VPS29-201ENST00000360579 MMS19Q96T76 1030 aa14.74□□□□□ -0.05
VPS29-201ENST00000360579 DUSP9Q99956 384 aaKnown RBP14.74□□□□□ -0.05
VPS29-201ENST00000360579 CBWD1Q9BRT8 395 aa14.74□□□□□ -0.05
VPS29-201ENST00000360579 ELOVL4Q9GZR5 314 aa14.74□□□□□ -0.05
VPS29-201ENST00000360579 SNX25Q9H3E2 840 aa14.74□□□□□ -0.05
VPS29-201ENST00000360579 CALCOCO1Q9P1Z2 691 aa14.74□□□□□ -0.05
VPS29-201ENST00000360579 SUSD2Q9UGT4 822 aa14.74□□□□□ -0.05
VPS29-201ENST00000360579 GPSM3Q9Y4H4 160 aa14.74□□□□□ -0.05
VPS29-201ENST00000360579 PCDHB9Q9Y5E1 797 aa14.74□□□□□ -0.05
VPS29-201ENST00000360579 PTPRDP23468 1912 aa14.74□□□□□ -0.05
VPS29-201ENST00000360579 TNRC6BQ9UPQ9 1833 aaKnown RBP14.73□□□□□ -0.05
VPS29-201ENST00000360579 PLXND1Q9Y4D7 1925 aa14.73□□□□□ -0.05
VPS29-201ENST00000360579 SCAMP3O14828 347 aaKnown RBP14.73□□□□□ -0.05
VPS29-201ENST00000360579 RTN3O95197 1032 aaPredicted RBP14.73□□□□□ -0.05
VPS29-201ENST00000360579 CAPNS1P04632 268 aa14.73□□□□□ -0.05
VPS29-201ENST00000360579 GABRG2P18507 467 aa14.73□□□□□ -0.05
VPS29-201ENST00000360579 GJB2P29033 226 aa14.73□□□□□ -0.05
VPS29-201ENST00000360579 NTSR1P30989 418 aa14.73□□□□□ -0.05
VPS29-201ENST00000360579 GNL1P36915 607 aaPredicted RBP14.73□□□□□ -0.05
VPS29-201ENST00000360579 FAM193AP78312 1265 aa14.73□□□□□ -0.05
VPS29-201ENST00000360579 GRIN1Q05586 938 aa14.73□□□□□ -0.05
VPS29-201ENST00000360579 MDH1BQ5I0G3 518 aa14.73□□□□□ -0.05
VPS29-201ENST00000360579 C10orf76Q5T2E6 689 aa14.73□□□□□ -0.05
VPS29-201ENST00000360579 SCARA3Q6AZY7 606 aa14.73□□□□□ -0.05
VPS29-201ENST00000360579 SDE2Q6IQ49 451 aa14.73□□□□□ -0.05
VPS29-201ENST00000360579 SV2BQ7L1I2 683 aa14.73□□□□□ -0.05
VPS29-201ENST00000360579 HS2ST1Q7LGA3 356 aa14.73□□□□□ -0.05
VPS29-201ENST00000360579 BRAPQ7Z569 592 aa14.73□□□□□ -0.05
VPS29-201ENST00000360579 ETFBKMTQ8IXQ9 262 aa14.73□□□□□ -0.05
VPS29-201ENST00000360579 TERB1Q8NA31 727 aa14.73□□□□□ -0.05
VPS29-201ENST00000360579 ADAMTS14Q8WXS8 1223 aa14.73□□□□□ -0.05
VPS29-201ENST00000360579 KIF2CQ99661 725 aa14.73□□□□□ -0.05
VPS29-201ENST00000360579 ZDHHC4Q9NPG8 344 aa14.73□□□□□ -0.05
VPS29-201ENST00000360579 FSCN3Q9NQT6 498 aa14.73□□□□□ -0.05
VPS29-201ENST00000360579 TBC1D7Q9P0N9 293 aa14.73□□□□□ -0.05
VPS29-201ENST00000360579 SH3BP1Q9Y3L3 701 aa14.73□□□□□ -0.05
VPS29-201ENST00000360579 STARD13Q9Y3M8 1113 aa14.73□□□□□ -0.05
VPS29-201ENST00000360579 GON4LQ3T8J9 2241 aa14.73□□□□□ -0.05
VPS29-201ENST00000360579 IGHV1OR15-9A0A0B4J2B8 117 aa14.72□□□□□ -0.05
VPS29-201ENST00000360579 ZNF233A6NK53 670 aa14.72□□□□□ -0.05
VPS29-201ENST00000360579 TULP3O75386 442 aa14.72□□□□□ -0.05
VPS29-201ENST00000360579 TACC1O75410 805 aa14.72□□□□□ -0.05
VPS29-201ENST00000360579 NEFLP07196 543 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms