RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 CLIC5Q9NZA1 410 aa13.85□□□□□ -0.19
CCDC144A-203ENST00000360495 DKK3Q9UBP4 350 aa13.85□□□□□ -0.19
CCDC144A-203ENST00000360495 BTBD3Q9Y2F9 522 aa13.85□□□□□ -0.19
CCDC144A-203ENST00000360495 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.85□□□□□ -0.19
CCDC144A-203ENST00000360495 ANKARQ7Z5J8 1434 aa13.85□□□□□ -0.19
CCDC144A-203ENST00000360495 PNPLA7Q6ZV29 1317 aa13.85□□□□□ -0.19
CCDC144A-203ENST00000360495 CNTFP26441 200 aa13.85□□□□□ -0.19
CCDC144A-203ENST00000360495 PTENP60484 403 aa13.85□□□□□ -0.19
CCDC144A-203ENST00000360495 FIGNQ5HY92 759 aa13.85□□□□□ -0.19
CCDC144A-203ENST00000360495 RIPOR1Q6ZS17 1223 aa13.85□□□□□ -0.19
CCDC144A-203ENST00000360495 ADCK2Q7Z695 626 aa13.85□□□□□ -0.19
CCDC144A-203ENST00000360495 DHRSXQ8N5I4 330 aa13.85□□□□□ -0.19
CCDC144A-203ENST00000360495 COPS7BQ9H9Q2 264 aaPredicted RBP13.85□□□□□ -0.19
CCDC144A-203ENST00000360495 IARS2Q9NSE4 1012 aaKnown RBP13.85□□□□□ -0.19
CCDC144A-203ENST00000360495 FAM49BQ9NUQ9 324 aa13.85□□□□□ -0.19
CCDC144A-203ENST00000360495 VWA5AO00534 786 aa13.85□□□□□ -0.19
CCDC144A-203ENST00000360495 UBDO15205 165 aa13.85□□□□□ -0.19
CCDC144A-203ENST00000360495 SLC26A4O43511 780 aa13.85□□□□□ -0.19
CCDC144A-203ENST00000360495 BMPR2Q13873 1038 aa13.85□□□□□ -0.19
CCDC144A-203ENST00000360495 TAB1Q15750 504 aa13.85□□□□□ -0.19
CCDC144A-203ENST00000360495 KYAT1Q16773 422 aa13.85□□□□□ -0.19
CCDC144A-203ENST00000360495 FAM98BQ52LJ0 330 aaKnown RBP13.85□□□□□ -0.19
CCDC144A-203ENST00000360495 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.85□□□□□ -0.19
CCDC144A-203ENST00000360495 PIF1Q9H611 641 aa13.85□□□□□ -0.19
CCDC144A-203ENST00000360495 RPAP3Q9H6T3 665 aaPredicted RBP13.85□□□□□ -0.19
CCDC144A-203ENST00000360495 SPASTQ9UBP0 616 aa13.85□□□□□ -0.19
CCDC144A-203ENST00000360495 R3HDM2Q9Y2K5 976 aaKnown RBP13.85□□□□□ -0.19
CCDC144A-203ENST00000360495 SNX9Q9Y5X1 595 aa13.85□□□□□ -0.19
CCDC144A-203ENST00000360495 F5H6K3 240 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 MTSS1O43312 755 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 LDLRP01130 860 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 PON1P27169 355 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 FLT3P36888 993 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 MTTPP55157 894 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 KLRC3Q07444 240 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 GRAPQ13588 217 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 SNRNP48Q6IEG0 339 aaKnown RBP13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 PRMT9Q6P2P2 845 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 RNF148Q8N7C7 305 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 RNF149Q8NC42 400 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 GRAPLQ8TC17 118 aaPredicted RBP13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 SH2D3AQ9BRG2 576 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 PI4K2AQ9BTU6 479 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 RNF146Q9NTX7 359 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 PTGES3LE9PB15 166 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 TK2O00142 265 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 PIK3CDO00329 1044 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 CDK16Q00536 496 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 TTC27Q6P3X3 843 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 LINC00523Q86TU6 105 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 NEDD1Q8NHV4 660 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 TCP10LQ8TDR4 215 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 KCND2Q9NZV8 630 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 POLIQ9UNA4 740 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 TPRKBQ9Y3C4 175 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 USP42Q9H9J4 1324 aaKnown RBP13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 OPLAHO14841 1288 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 ATG7O95352 703 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 PGM3O95394 542 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 ME2P23368 584 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 YY1P25490 414 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 CAPZA2P47755 286 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 RPS7P62081 194 aaKnown RBP13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 TAF5Q15542 800 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 SUPT20HL1Q3ZLR7 823 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 PERM1Q5SV97 790 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 TMEM26Q6ZUK4 368 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 TBC1D19Q8N5T2 526 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 SDR42E2A6NKP2 422 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 BAIAP3O94812 1187 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 JAK1P23458 1154 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 SLC1A6P48664 564 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 ERVK-9P63128 1117 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 ACAP1Q15027 740 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 POLD3Q15054 466 aaPredicted RBP13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 CLEC16AQ2KHT3 1053 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 TTMPQ5BVD1 217 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 CHSY1Q86X52 802 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 DGCR6LQ9BY27 220 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 COA1Q9GZY4 146 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 SEMA6AQ9H2E6 1030 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 AVENQ9NQS1 362 aaPredicted RBP13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 CHST12Q9NRB3 414 aa13.84□□□□□ -0.19
CCDC144A-203ENST00000360495 INPP4BO15327 924 aa13.83□□□□□ -0.19
CCDC144A-203ENST00000360495 RBP5P82980 135 aa13.83□□□□□ -0.19
CCDC144A-203ENST00000360495 SCARF1Q14162 830 aa13.83□□□□□ -0.19
CCDC144A-203ENST00000360495 WDR36Q8NI36 951 aaKnown RBP13.83□□□□□ -0.19
CCDC144A-203ENST00000360495 PLEKHG4BQ96PX9 1271 aa13.83□□□□□ -0.19
CCDC144A-203ENST00000360495 WWOXQ9NZC7 414 aa13.83□□□□□ -0.19
CCDC144A-203ENST00000360495 CROTQ9UKG9 612 aa13.83□□□□□ -0.19
CCDC144A-203ENST00000360495 RNF112Q9ULX5 631 aa13.83□□□□□ -0.19
CCDC144A-203ENST00000360495 FARP1Q9Y4F1 1045 aaPredicted RBP13.83□□□□□ -0.19
CCDC144A-203ENST00000360495 SMIM31A0A1B0GVY4 71 aa13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 LSM1O15116 133 aaKnown RBP13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 KRT6AP02538 564 aa13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 TTKP33981 857 aa13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 ZSWIM7Q19AV6 140 aa13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 ELMSAN1Q6PJG2 1045 aa13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 TSEN2Q8NCE0 465 aaKnown RBP13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 UTP15Q8TED0 518 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms