RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 CDH18Q13634 790 aa16.55■□□□□ 0.24
COL18A1-203ENST00000359759 RIPOR1Q6ZS17 1223 aa16.55■□□□□ 0.24
COL18A1-203ENST00000359759 COMMD2Q86X83 199 aa16.55■□□□□ 0.24
COL18A1-203ENST00000359759 RSPH1Q8WYR4 309 aa16.55■□□□□ 0.24
COL18A1-203ENST00000359759 PRCCQ92733 491 aaPredicted RBP16.55■□□□□ 0.24
COL18A1-203ENST00000359759 COPS7BQ9H9Q2 264 aaPredicted RBP16.55■□□□□ 0.24
COL18A1-203ENST00000359759 SLC25A13Q9UJS0 675 aa16.55■□□□□ 0.24
COL18A1-203ENST00000359759 DUSP10Q9Y6W6 482 aa16.55■□□□□ 0.24
COL18A1-203ENST00000359759 MFN2O95140 757 aa16.55■□□□□ 0.24
COL18A1-203ENST00000359759 CACNA2D1P54289 1103 aa16.55■□□□□ 0.24
COL18A1-203ENST00000359759 CRYMQ14894 314 aa16.55■□□□□ 0.24
COL18A1-203ENST00000359759 ANKS6Q68DC2 871 aa16.55■□□□□ 0.24
COL18A1-203ENST00000359759 C16orf62Q7Z3J2 963 aa16.55■□□□□ 0.24
COL18A1-203ENST00000359759 STRA8Q7Z7C7 330 aa16.55■□□□□ 0.24
COL18A1-203ENST00000359759 COL15A1P39059 1388 aa16.55■□□□□ 0.24
COL18A1-203ENST00000359759 KIAA0391O15091 583 aaKnown RBP16.55■□□□□ 0.24
COL18A1-203ENST00000359759 CYP19A1P11511 503 aaPredicted RBP16.55■□□□□ 0.24
COL18A1-203ENST00000359759 FDFT1P37268 417 aa16.55■□□□□ 0.24
COL18A1-203ENST00000359759 NPEPPSP55786 919 aa16.55■□□□□ 0.24
COL18A1-203ENST00000359759 EFHC1Q5JVL4 640 aa16.55■□□□□ 0.24
COL18A1-203ENST00000359759 GLRA4Q5JXX5 417 aa16.55■□□□□ 0.24
COL18A1-203ENST00000359759 OTUD3Q5T2D3 398 aaPredicted RBP16.55■□□□□ 0.24
COL18A1-203ENST00000359759 ZNF618Q5T7W0 954 aa16.55■□□□□ 0.24
COL18A1-203ENST00000359759 ZMYND8Q9ULU4 1186 aaPredicted RBP16.55■□□□□ 0.24
COL18A1-203ENST00000359759 METP08581 1390 aa16.55■□□□□ 0.24
COL18A1-203ENST00000359759 CYP27B1O15528 508 aa16.55■□□□□ 0.24
COL18A1-203ENST00000359759 VPS26AO75436 327 aa16.55■□□□□ 0.24
COL18A1-203ENST00000359759 FGFR2P21802 821 aa16.55■□□□□ 0.24
COL18A1-203ENST00000359759 CNGA2Q16280 664 aa16.55■□□□□ 0.24
COL18A1-203ENST00000359759 NECAB2Q7Z6G3 386 aa16.55■□□□□ 0.24
COL18A1-203ENST00000359759 FAM228AQ86W67 206 aa16.55■□□□□ 0.24
COL18A1-203ENST00000359759 CNPY4Q8N129 248 aa16.55■□□□□ 0.24
COL18A1-203ENST00000359759 MRGBPQ9NV56 204 aa16.55■□□□□ 0.24
COL18A1-203ENST00000359759 DUSP12Q9UNI6 340 aa16.55■□□□□ 0.24
COL18A1-203ENST00000359759 CALB2P22676 271 aa16.54■□□□□ 0.24
COL18A1-203ENST00000359759 FAM45BPQ6NSW5 357 aa16.54■□□□□ 0.24
COL18A1-203ENST00000359759 UTS2BQ765I0 119 aa16.54■□□□□ 0.24
COL18A1-203ENST00000359759 N6AMT1Q9Y5N5 214 aa16.54■□□□□ 0.24
COL18A1-203ENST00000359759 RPL10AP62906 217 aaKnown RBP16.54■□□□□ 0.24
COL18A1-203ENST00000359759 CSHL1Q14406 222 aa16.54■□□□□ 0.24
COL18A1-203ENST00000359759 ALX1Q15699 326 aa16.54■□□□□ 0.24
COL18A1-203ENST00000359759 TMEM26Q6ZUK4 368 aa16.54■□□□□ 0.24
COL18A1-203ENST00000359759 SGMS1Q86VZ5 419 aa16.54■□□□□ 0.24
COL18A1-203ENST00000359759 DEFB107AQ8IZN7 70 aa16.54■□□□□ 0.24
COL18A1-203ENST00000359759 FOXP3Q9BZS1 431 aa16.54■□□□□ 0.24
COL18A1-203ENST00000359759 CHKBQ9Y259 395 aa16.54■□□□□ 0.24
COL18A1-203ENST00000359759 ERVK-7P63135 1459 aa16.54■□□□□ 0.24
COL18A1-203ENST00000359759 UBOX5O94941 541 aa16.54■□□□□ 0.24
COL18A1-203ENST00000359759 PEX5P50542 639 aa16.54■□□□□ 0.24
COL18A1-203ENST00000359759 CAMK2GQ13555 558 aaPredicted RBP16.54■□□□□ 0.24
COL18A1-203ENST00000359759 TAF5Q15542 800 aa16.54■□□□□ 0.24
COL18A1-203ENST00000359759 AGKQ53H12 422 aa16.54■□□□□ 0.24
COL18A1-203ENST00000359759 RAET1EQ8TD07 263 aa16.54■□□□□ 0.24
COL18A1-203ENST00000359759 PACSIN1Q9BY11 444 aa16.54■□□□□ 0.24
COL18A1-203ENST00000359759 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.54■□□□□ 0.244e-6■■■■□ 26.5
COL18A1-203ENST00000359759 KLHL3Q9UH77 587 aa16.54■□□□□ 0.24
COL18A1-203ENST00000359759 MGAT4DA6NG13 374 aa16.54■□□□□ 0.24
COL18A1-203ENST00000359759 PSTPIP1O43586 416 aa16.54■□□□□ 0.24
COL18A1-203ENST00000359759 KATNA1O75449 491 aa16.54■□□□□ 0.24
COL18A1-203ENST00000359759 ANXA9O76027 345 aa16.54■□□□□ 0.24
COL18A1-203ENST00000359759 BCL10O95999 233 aa16.54■□□□□ 0.24
COL18A1-203ENST00000359759 KCNJ6P48051 423 aa16.54■□□□□ 0.24
COL18A1-203ENST00000359759 DDR2Q16832 855 aa16.54■□□□□ 0.24
COL18A1-203ENST00000359759 TRPC4Q9UBN4 977 aa16.54■□□□□ 0.24
COL18A1-203ENST00000359759 USP6P35125 1406 aa16.54■□□□□ 0.24
COL18A1-203ENST00000359759 FAM200BP0CF97 657 aa16.54■□□□□ 0.24
COL18A1-203ENST00000359759 ITGB6P18564 788 aa16.54■□□□□ 0.24
COL18A1-203ENST00000359759 ALDH9A1P49189 494 aa16.54■□□□□ 0.24
COL18A1-203ENST00000359759 GDPD5Q8WTR4 605 aa16.54■□□□□ 0.24
COL18A1-203ENST00000359759 ACOX2Q99424 681 aa16.54■□□□□ 0.24
COL18A1-203ENST00000359759 ATP7BP35670 1465 aa16.54■□□□□ 0.24
COL18A1-203ENST00000359759 STAU1O95793 577 aaKnown RBP16.54■□□□□ 0.24
COL18A1-203ENST00000359759 C6orf222P0C671 652 aaPredicted RBP16.54■□□□□ 0.24
COL18A1-203ENST00000359759 GUCA1AP43080 201 aaPredicted RBP16.54■□□□□ 0.24
COL18A1-203ENST00000359759 BMPR2Q13873 1038 aa16.54■□□□□ 0.24
COL18A1-203ENST00000359759 CARNMT1Q8N4J0 409 aa16.54■□□□□ 0.24
COL18A1-203ENST00000359759 TMEM237Q96Q45 408 aa16.54■□□□□ 0.24
COL18A1-203ENST00000359759 KDM5CP41229 1560 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 ATP6V1C1P21283 382 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 HOXD10P28358 340 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 ALDH1A3P47895 512 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 ADRM1Q16186 407 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 PHKG1Q16816 387 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 PAFAH2Q99487 392 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 ZSWIM1Q9BR11 485 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 BCL2L14Q9BZR8 327 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 DDIT4Q9NX09 232 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 ASS1P00966 412 aaKnown RBP16.53■□□□□ 0.24
COL18A1-203ENST00000359759 MAGEA10P43363 369 aaPredicted RBP16.53■□□□□ 0.24
COL18A1-203ENST00000359759 SDE2Q6IQ49 451 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 MACC1Q6ZN28 852 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 CACTIN-AS1Q8N1I8 211 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 TMEM121Q9BTD3 319 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 CLEC4MQ9H2X3 399 aaPredicted RBP16.53■□□□□ 0.24
COL18A1-203ENST00000359759 POLE3Q9NRF9 147 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 ZNF624Q9P2J8 865 aaPredicted RBP16.53■□□□□ 0.24
COL18A1-203ENST00000359759 GEMP55040 296 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 FOXO4P98177 505 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 MAPK7Q13164 816 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 TAF2Q6P1X5 1199 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms