RNA–Protein interactions for RNA: ENST00000359551.6

SHARPIN-201, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 1 (best)

Gene SHARPIN, Length 1,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-201ENST00000359551 TUBB2AQ13885 445 aa26.1■■□□□ 1.77
SHARPIN-201ENST00000359551 CPNE8Q86YQ8 564 aa26.1■■□□□ 1.77
SHARPIN-201ENST00000359551 SCN4BQ8IWT1 228 aa26.1■■□□□ 1.77
SHARPIN-201ENST00000359551 C17orf80Q9BSJ5 609 aa26.1■■□□□ 1.77
SHARPIN-201ENST00000359551 TUBB2BQ9BVA1 445 aa26.1■■□□□ 1.77
SHARPIN-201ENST00000359551 L2HGDHQ9H9P8 463 aa26.1■■□□□ 1.77
SHARPIN-201ENST00000359551 SAR1BQ9Y6B6 198 aa26.1■■□□□ 1.77
SHARPIN-201ENST00000359551 HSF2BPO75031 334 aa26.09■■□□□ 1.77
SHARPIN-201ENST00000359551 ZBED1O96006 694 aa26.09■■□□□ 1.77
SHARPIN-201ENST00000359551 RB1P06400 928 aa26.09■■□□□ 1.77
SHARPIN-201ENST00000359551 ZNF143P52747 638 aaPredicted RBP26.09■■□□□ 1.77
SHARPIN-201ENST00000359551 UBE3AQ05086 875 aa26.09■■□□□ 1.77
SHARPIN-201ENST00000359551 BHLHA9Q7RTU4 235 aa26.09■■□□□ 1.77
SHARPIN-201ENST00000359551 AUTS2Q8WXX7 1259 aa26.09■■□□□ 1.77
SHARPIN-201ENST00000359551 IRGQQ8WZA9 623 aa26.09■■□□□ 1.77
SHARPIN-201ENST00000359551 IRAK3Q9Y616 596 aa26.09■■□□□ 1.77
SHARPIN-201ENST00000359551 DDX3YO15523 660 aaKnown RBP26.09■■□□□ 1.77
SHARPIN-201ENST00000359551 SPOPO43791 374 aa26.09■■□□□ 1.77
SHARPIN-201ENST00000359551 TCP1P17987 556 aaKnown RBP26.09■■□□□ 1.77
SHARPIN-201ENST00000359551 GPD1P21695 349 aa26.09■■□□□ 1.77
SHARPIN-201ENST00000359551 DNAJB2P25686 324 aa26.09■■□□□ 1.77
SHARPIN-201ENST00000359551 CTNNA2P26232 953 aa26.09■■□□□ 1.77
SHARPIN-201ENST00000359551 SLC5A3P53794 718 aa26.09■■□□□ 1.77
SHARPIN-201ENST00000359551 DUSP4Q13115 394 aa26.09■■□□□ 1.77
SHARPIN-201ENST00000359551 ACAP1Q15027 740 aa26.09■■□□□ 1.77
SHARPIN-201ENST00000359551 PTPROQ16827 1216 aa26.09■■□□□ 1.77
SHARPIN-201ENST00000359551 SPPL3Q8TCT6 385 aa26.09■■□□□ 1.77
SHARPIN-201ENST00000359551 RXFP2Q8WXD0 754 aa26.09■■□□□ 1.77
SHARPIN-201ENST00000359551 SPATA17Q96L03 361 aa26.09■■□□□ 1.77
SHARPIN-201ENST00000359551 CEP295NLQ96MC4 621 aa26.09■■□□□ 1.77
SHARPIN-201ENST00000359551 SAMD11Q96NU1 681 aa26.09■■□□□ 1.77
SHARPIN-201ENST00000359551 OSBPL9Q96SU4 736 aa26.09■■□□□ 1.77
SHARPIN-201ENST00000359551 CNPY3Q9BT09 278 aa26.09■■□□□ 1.77
SHARPIN-201ENST00000359551 GRAP2O75791 330 aa26.08■■□□□ 1.77
SHARPIN-201ENST00000359551 CA3P07451 260 aa26.08■■□□□ 1.77
SHARPIN-201ENST00000359551 ATF2P15336 505 aa26.08■■□□□ 1.77
SHARPIN-201ENST00000359551 PSMA2P25787 234 aa26.08■■□□□ 1.77
SHARPIN-201ENST00000359551 RNASE9P60153 205 aaKnown RBP26.08■■□□□ 1.77
SHARPIN-201ENST00000359551 DDR2Q16832 855 aa26.08■■□□□ 1.77
SHARPIN-201ENST00000359551 NDRG1Q92597 394 aaKnown RBP26.08■■□□□ 1.77
SHARPIN-201ENST00000359551 IL37Q9NZH6 218 aa26.08■■□□□ 1.77
SHARPIN-201ENST00000359551 CDC23Q9UJX2 597 aa26.08■■□□□ 1.77
SHARPIN-201ENST00000359551 SLC27A5Q9Y2P5 690 aa26.08■■□□□ 1.77
SHARPIN-201ENST00000359551 MRFAP1Q9Y605 127 aa26.08■■□□□ 1.77
SHARPIN-201ENST00000359551 DAB1O75553 588 aa26.07■■□□□ 1.76
SHARPIN-201ENST00000359551 USP17L7P0C7H9 530 aa26.07■■□□□ 1.76
SHARPIN-201ENST00000359551 PDGFRAP16234 1089 aa26.07■■□□□ 1.76
SHARPIN-201ENST00000359551 CTNNA1P35221 906 aaKnown RBP26.07■■□□□ 1.76
SHARPIN-201ENST00000359551 GPR15P49685 360 aa26.07■■□□□ 1.76
SHARPIN-201ENST00000359551 YWHAZP63104 245 aaKnown RBP26.07■■□□□ 1.76
SHARPIN-201ENST00000359551 MGAT5BQ3V5L5 792 aa26.07■■□□□ 1.76
SHARPIN-201ENST00000359551 NUP93Q8N1F7 819 aa26.07■■□□□ 1.76
SHARPIN-201ENST00000359551 MAFFQ9ULX9 164 aa26.07■■□□□ 1.76
SHARPIN-201ENST00000359551 CCDC66A2RUB6 948 aa26.06■■□□□ 1.76
SHARPIN-201ENST00000359551 H0YGN5 161 aa26.06■■□□□ 1.76
SHARPIN-201ENST00000359551 TEX28O15482 410 aa26.06■■□□□ 1.76
SHARPIN-201ENST00000359551 PTPN9P43378 593 aa26.06■■□□□ 1.76
SHARPIN-201ENST00000359551 RPL10AP62906 217 aaKnown RBP26.06■■□□□ 1.76
SHARPIN-201ENST00000359551 SPRED2Q7Z698 418 aa26.06■■□□□ 1.76
SHARPIN-201ENST00000359551 SCAMP5Q8TAC9 235 aa26.06■■□□□ 1.76
SHARPIN-201ENST00000359551 SLC2A13Q96QE2 648 aa26.06■■□□□ 1.76
SHARPIN-201ENST00000359551 SEPT5Q99719 369 aaPredicted RBP26.06■■□□□ 1.76
SHARPIN-201ENST00000359551 C11orf84Q9BUA3 381 aaPredicted RBP26.06■■□□□ 1.76
SHARPIN-201ENST00000359551 DDX23Q9BUQ8 820 aaKnown RBP26.06■■□□□ 1.76
SHARPIN-201ENST00000359551 ALG13Q9NP73 1137 aaKnown RBP26.06■■□□□ 1.76
SHARPIN-201ENST00000359551 YBX2Q9Y2T7 364 aaKnown RBP26.06■■□□□ 1.76
SHARPIN-201ENST00000359551 PCDHA3Q9Y5H8 950 aa26.06■■□□□ 1.76
SHARPIN-201ENST00000359551 YJEFN3A6XGL0 299 aa26.06■■□□□ 1.76
SHARPIN-201ENST00000359551 E7ENQ6 273 aa26.06■■□□□ 1.76
SHARPIN-201ENST00000359551 CES2O00748 559 aa26.06■■□□□ 1.76
SHARPIN-201ENST00000359551 TUFMP49411 452 aaKnown RBP26.06■■□□□ 1.76
SHARPIN-201ENST00000359551 PEX5P50542 639 aa26.06■■□□□ 1.76
SHARPIN-201ENST00000359551 ERVFC1P60507 584 aa26.06■■□□□ 1.76
SHARPIN-201ENST00000359551 ERVK-21P61565 698 aa26.06■■□□□ 1.76
SHARPIN-201ENST00000359551 CCDC14Q49A88 953 aa26.06■■□□□ 1.76
SHARPIN-201ENST00000359551 TGS1Q96RS0 853 aaKnown RBP26.06■■□□□ 1.76
SHARPIN-201ENST00000359551 COMMD8Q9NX08 183 aa26.06■■□□□ 1.76
SHARPIN-201ENST00000359551 MTCL1Q9Y4B5 1905 aaKnown RBP26.05■■□□□ 1.76
SHARPIN-201ENST00000359551 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.05■■□□□ 1.76
SHARPIN-201ENST00000359551 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.05■■□□□ 1.76
SHARPIN-201ENST00000359551 FAM92AA1XBS5 289 aa26.05■■□□□ 1.76
SHARPIN-201ENST00000359551 SEC24AO95486 1093 aa26.05■■□□□ 1.76
SHARPIN-201ENST00000359551 CNPP09543 421 aaKnown RBP26.05■■□□□ 1.76
SHARPIN-201ENST00000359551 DNAJB1P25685 340 aa26.05■■□□□ 1.76
SHARPIN-201ENST00000359551 MATKP42679 507 aa26.05■■□□□ 1.76
SHARPIN-201ENST00000359551 SDHAF4Q5VUM1 108 aa26.05■■□□□ 1.76
SHARPIN-201ENST00000359551 CC2D1AQ6P1N0 951 aaPredicted RBP26.05■■□□□ 1.76
SHARPIN-201ENST00000359551 HFE2Q6ZVN8 426 aa26.05■■□□□ 1.76
SHARPIN-201ENST00000359551 TMC7Q7Z402 723 aa26.05■■□□□ 1.76
SHARPIN-201ENST00000359551 ARFGAP1Q8N6T3 406 aa26.05■■□□□ 1.76
SHARPIN-201ENST00000359551 POF1BQ8WVV4 589 aa26.05■■□□□ 1.76
SHARPIN-201ENST00000359551 KRT35Q92764 455 aa26.05■■□□□ 1.76
SHARPIN-201ENST00000359551 FAM149B1Q96BN6 582 aa26.05■■□□□ 1.76
SHARPIN-201ENST00000359551 TCF25Q9BQ70 676 aa26.05■■□□□ 1.76
SHARPIN-201ENST00000359551 POPDC2Q9HBU9 364 aa26.05■■□□□ 1.76
SHARPIN-201ENST00000359551 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP26.05■■□□□ 1.76
SHARPIN-201ENST00000359551 SRGAP2O75044 1071 aa26.04■■□□□ 1.76
SHARPIN-201ENST00000359551 LRCH4O75427 683 aa26.04■■□□□ 1.76
SHARPIN-201ENST00000359551 SOAT2O75908 522 aa26.04■■□□□ 1.76
SHARPIN-201ENST00000359551 CXCL14O95715 111 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms