RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 OSCP1Q8WVF1 389 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 NCKIPSDQ9NZQ3 722 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 CSADQ9Y600 493 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 GJA3Q9Y6H8 435 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 PPRC1Q5VV67 1664 aaKnown RBP9.06□□□□□ -0.96
COL6A6-201ENST00000358511 CNOT3O75175 753 aaKnown RBP9.06□□□□□ -0.96
COL6A6-201ENST00000358511 S100A9P06702 114 aaKnown RBP9.06□□□□□ -0.96
COL6A6-201ENST00000358511 TRAF3Q13114 568 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 AKAP14Q86UN6 197 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 SETD9Q8NE22 299 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 TRPC4APQ8TEL6 797 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 ATG4AQ8WYN0 398 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 ZNF333Q96JL9 665 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 CCT3P49368 545 aaKnown RBP9.06□□□□□ -0.96
COL6A6-201ENST00000358511 PSMC5P62195 406 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 KYAT1Q16773 422 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 TBCELQ5QJ74 424 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 ELMSAN1Q6PJG2 1045 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 EXOC3L1Q86VI1 746 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 CCDC24Q8N4L8 307 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.06□□□□□ -0.96
COL6A6-201ENST00000358511 KLHL3Q9UH77 587 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 ACTL7BQ9Y614 415 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 TCP10L2B9ZVM9 353 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 CLOCKO15516 846 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 ENTPD5O75356 428 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 ALADP13716 330 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 EIF2AK2P19525 551 aaKnown RBP9.06□□□□□ -0.96
COL6A6-201ENST00000358511 FGD2Q7Z6J4 655 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 VPS37AQ8NEZ2 397 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 FEZF2Q8TBJ5 459 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 TFB1MQ8WVM0 346 aaKnown RBP9.06□□□□□ -0.96
COL6A6-201ENST00000358511 BORCS5Q969J3 196 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 CHID1Q9BWS9 393 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 ARMCX1Q9P291 453 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 ARAP3Q8WWN8 1544 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 SDR42E2A6NKP2 422 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 ALOX12P18054 663 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 ITGA9Q13797 1035 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 ANGPT1Q15389 498 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 SAMD4BQ5PRF9 694 aaKnown RBP9.06□□□□□ -0.96
COL6A6-201ENST00000358511 ARHGEF19Q8IW93 802 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 GIPC3Q8TF64 312 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 RMDN3Q96TC7 470 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 PNPLA3Q9NST1 481 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 FBXO28Q9NVF7 368 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 SELENONQ9NZV5 590 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 MROH2AA6NES4 1674 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 CASP5P51878 434 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 NCOA4Q13772 614 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 BTN2A1Q7KYR7 527 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 UNC45BQ8IWX7 931 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 SHCBP1Q8NEM2 672 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 AGAP3Q96P47 875 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 C2orf40Q9H1Z8 148 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 ARID1BQ8NFD5 2236 aaPredicted RBP9.05□□□□□ -0.96
COL6A6-201ENST00000358511 LINC00854A0A1B0GVQ3 168 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 CENPXA8MT69 81 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 BTN3A3O00478 584 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 PIK3R1P27986 724 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 PSMB9P28065 219 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 RPS6KA3P51812 740 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 PARP6Q2NL67 630 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 CENPLQ8N0S6 344 aaPredicted RBP9.05□□□□□ -0.96
COL6A6-201ENST00000358511 MTMR8Q96EF0 704 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 COMMD8Q9NX08 183 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 RPS6KL1Q9Y6S9 549 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 NEO1Q92859 1461 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 CYP2D6P10635 497 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 ME2P23368 584 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 NMT1P30419 496 aaKnown RBP9.05□□□□□ -0.96
COL6A6-201ENST00000358511 SLC5A9Q2M3M2 681 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 FAM98BQ52LJ0 330 aaKnown RBP9.05□□□□□ -0.96
COL6A6-201ENST00000358511 CCDC33Q8N5R6 958 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 TCP10LQ8TDR4 215 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 NARS2Q96I59 477 aaKnown RBP9.05□□□□□ -0.96
COL6A6-201ENST00000358511 THUMPD3Q9BV44 507 aaKnown RBP9.05□□□□□ -0.96
COL6A6-201ENST00000358511 VTA1Q9NP79 307 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 H2AFY2Q9P0M6 372 aaPredicted RBP9.05□□□□□ -0.96
COL6A6-201ENST00000358511 VTI1BQ9UEU0 232 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 OPLAHO14841 1288 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 FESP07332 822 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 ALDH1A3P47895 512 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 SLC10A5Q5PT55 438 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 DHFR2Q86XF0 187 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 CKAP2Q8WWK9 683 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 NDFIP2Q9NV92 336 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 MOSPD1Q9UJG1 213 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 TPRKBQ9Y3C4 175 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 RTN3O95197 1032 aaPredicted RBP9.05□□□□□ -0.96
COL6A6-201ENST00000358511 CCDC166P0CW27 439 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 DRD4P21917 467 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 ITFG2Q969R8 447 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 NUDT12Q9BQG2 462 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 ENOPH1Q9UHY7 261 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 SLIT1O75093 1534 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 VWDEQ8N2E2 1590 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 PIPSLA2A3N6 862 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 NR5A2O00482 541 aa9.05□□□□□ -0.96
COL6A6-201ENST00000358511 CAMTA2O94983 1202 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms